FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:181..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_SCHPO (Guanylate kinase OS=Schizosaccharomyces pombe GN=SPBC1198.05 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 49/107 (45.79%), Postives = 74/107 (69.16%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKL 331
            GN+YGTS+ A++ +    K+ ILDID+ G   V+ASP+DA ++F+ PPS+E+LE RLR  GTE E  IL++L  A+ EIE  +  G FD ++ ND +E+ Y+ L+ +
Sbjct:   92 GNMYGTSIMAIQELEAVNKKAILDIDLQGVLQVKASPIDAQYVFLAPPSIEQLEVRLRGRGTENESAILQRLERARAEIEYSEKPGNFDALIVNDDVEKAYKQLEAI 198          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_MOUSE (Guanylate kinase OS=Mus musculus GN=Guk1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 50/108 (46.30%), Postives = 74/108 (68.52%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GNLYGTS EAV AV    + C+LD+D+ G RS++ + L  I+IF+ PPS++ LE+RLR   TETE+ + K+L  A+ ++E  K  G+FD ++ ND L++ Y  LK+ L
Sbjct:   78 GNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQAL 185          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_HUMAN (Guanylate kinase OS=Homo sapiens GN=GUK1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.873e-22
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GNLYGTS  AV+AV    + C+LD+D+ G R+++A+ L  I+I + PPS+  LE+RLR   TETE+ ++K+L  AQ ++E  K  G+FD ++ ND L++ Y  LK+ L
Sbjct:   78 GNLYGTSKVAVQAVQAMNRICVLDVDLQGVRNIKATDLRPIYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQADMESSKEPGLFDVVIINDSLDQAYAELKEAL 185          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PIG (Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 49/108 (45.37%), Postives = 73/108 (67.59%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GNLYGTS  AV AV    + C+LD+D+ G R+++ + L  I+IF+ PPS++ LE+RLR   TETE+ + K+L  A+ ++E  K  G+FD I+ ND L++ Y  LK+ L
Sbjct:   78 GNLYGTSKAAVRAVQAMNRICVLDVDLQGVRNIKKTDLQPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAAKADMESSKEPGLFDLIIINDSLDKAYWALKEAL 185          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BOVIN (Guanylate kinase OS=Bos taurus GN=GUK1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 49/108 (45.37%), Postives = 73/108 (67.59%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GNLYGTS  AV AV    + C+LD+D+ G R+++ + L  I+IF+ PPS++ LE+RLR   TETE+ + K+L  A+ ++E  K  G+FD I+ ND L++ Y  LK+ L
Sbjct:   78 GNLYGTSKAAVRAVQAMNRICVLDVDLQGVRNIKKTDLRPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAARADMESSKEPGLFDLIIVNDSLDKAYWALKEAL 185          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_DICDI (Guanylate kinase OS=Dictyostelium discoideum GN=guk1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 2
Query:    2 SVHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            +VHGN YGTS +A++ V+D  K CILDIDV G  SV+ + +   FIFI PP+ E L+ERL   GTE E+ + K+L  A++E+      G FDH++ N+ L+  Y  LK ++
Sbjct:   80 NVHGNFYGTSKKALKDVSDKNKICILDIDVQGCESVKKANIPCKFIFISPPTFETLQERLIGRGTENEETLKKRLETAKKEMVYRDIPGFFDHVIVNNVLDVAYGELKSII 190          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_YEAST (Guanylate kinase OS=Saccharomyces cerevisiae GN=GUK1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 51/109 (46.79%), Postives = 77/109 (70.64%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASP-LDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YG++V +V+ V+ +GK CILDID+ G +SV+A P L+A F+FI PPS+E+L++RL   GTETE+ I K+L  AQ E+   + +G  D ++ ND L++ Y+ LK  +
Sbjct:   76 GNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAE-TGAHDKVIVNDDLDKAYKELKDFI 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_DESVH (Guanylate kinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gmk PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLK 325
            VHGN YGT ++A   + D G+  + DIDV GAR +RAS     ++FI PPS +ELE RLRA GT+ E+ I ++L NA +E+   +    FD  + ND LE  Y+ L+
Sbjct:   78 VHGNFYGTPLKATLDLLDEGRDVLFDIDVQGARQLRASLQRGRYVFIMPPSRDELEHRLRARGTDDEETIARRLANAAKELREARR---FDAWIVNDDLERAYDELR 181          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_SYNSC (Guanylate kinase OS=Synechococcus sp. (strain CC9605) GN=gmk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17
Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGL 340
            GN YGT    VE    AG+  +L+I++ GAR VR S  D   IF+ PPS +ELE R+R  GT++ED I ++L  A+EE+E  +    FD ++ ND LE     ++ L+GL
Sbjct:   78 GNCYGTPRGPVEQQMAAGRPVLLEIELEGARQVRRSFPDGFQIFLAPPSFDELERRIRGRGTDSEDAIQRRLTRAREELEAQQE---FDAVVINDDLESALNQVETLMGL 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_SYNS3 (Guanylate kinase OS=Synechococcus sp. (strain CC9311) GN=gmk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17
Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGL 340
            GN YGT  E V      G   +L+I++ GAR VR S  +AI IF+ PPS+EELE+R+R  GTE E+ I ++L+ AQEE+E   +   FD ++ ND LE     L+K + L
Sbjct:   81 GNCYGTPREPVSERVANGIPVLLEIELEGARQVRKSLPEAIQIFLAPPSVEELEKRIRGRGTEAEEAIQRRLKRAQEELE---AQTEFDAVIVNDDLETALAELEKQMNL 187          
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_SCHPO1.282e-2245.79Guanylate kinase OS=Schizosaccharomyces pombe GN=S... [more]
KGUA_MOUSE1.282e-2246.30Guanylate kinase OS=Mus musculus GN=Guk1 PE=1 SV=2[more]
KGUA_HUMAN4.873e-2245.37Guanylate kinase OS=Homo sapiens GN=GUK1 PE=1 SV=2[more]
KGUA_PIG1.418e-2145.37Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2[more]
KGUA_BOVIN2.418e-2145.37Guanylate kinase OS=Bos taurus GN=GUK1 PE=1 SV=2[more]
KGUA_DICDI3.158e-2145.05Guanylate kinase OS=Dictyostelium discoideum GN=gu... [more]
KGUA_YEAST1.568e-2046.79Guanylate kinase OS=Saccharomyces cerevisiae GN=GU... [more]
KGUA_DESVH1.467e-1844.86Guanylate kinase OS=Desulfovibrio vulgaris (strain... [more]
KGUA_SYNSC8.051e-1742.73Guanylate kinase OS=Synechococcus sp. (strain CC96... [more]
KGUA_SYNS38.051e-1744.55Guanylate kinase OS=Synechococcus sp. (strain CC93... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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