FC877040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: AB1D_ARATH (ABC transporter D family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 5.449e-77 Identity = 137/171 (80.12%), Postives = 155/171 (90.64%), Query Frame = 1 Query: 10 EEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTI 522 +E GSG G+F+VPQRPYTCLGTLRDQIIYPLS+EEAE RA KL+ GE + +ILDS+LKTILE+VRL YLLER+ GWDA NWED+LSLGEQQRLGMARLFFH+PKFG+LDECTNATSVDVEEQLYR+A+DMG+TF+TSSQRPALIPFHSLELRLIDGEGNWELR+I Sbjct: 1162 KELGSGNGMFFVPQRPYTCLGTLRDQIIYPLSKEEAEKRAAKLYTSGESSTEAGSILDSHLKTILENVRLVYLLERDVGGWDATTNWEDILSLGEQQRLGMARLFFHRPKFGVLDECTNATSVDVEEQLYRVARDMGVTFITSSQRPALIPFHSLELRLIDGEGNWELRSI 1332 HSP 2 Score: 145.976 bits (367), Expect = 1.501e-34 Identity = 80/161 (49.69%), Postives = 105/161 (65.22%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPL-SREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWEL 513 IFYVPQRPY +GTLRDQ+IYPL S +E+EL + + + +L++V L YLL+R + + +NW D LSLGEQQRLGMARLF+HKPKF ILDECT+A + D+EE+ + MG + +T S RPAL+ FH + L L DGEG W + Sbjct: 518 IFYVPQRPYMAVGTLRDQLIYPLTSGQESEL-----------------LTEIGMVELLKNVDLEYLLDRYQP--EKEVNWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVVLSL-DGEGGWSV 658
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: ABCD3_RAT (ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus GN=Abcd3 PE=1 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 5.159e-35 Identity = 78/163 (47.85%), Postives = 105/163 (64.42%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTI 522 +FYVPQRPY LGTLRDQ+IYP +E+ + + + D LK L++V+L ++LERE GWD+ +W DVLS GE+QR+ MARLF+HKP+F ILDECT+A SVDVE+ +Y + +GIT T S R +L H L + DG GN+E + I Sbjct: 505 LFYVPQRPYMTLGTLRDQVIYPDGKEDQKKKGIS---------------DQVLKGYLDNVQLGHILEREG-GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHM-DGRGNYEFKKI 650
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: ABCD2_HUMAN (ATP-binding cassette sub-family D member 2 OS=Homo sapiens GN=ABCD2 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.159e-35 Identity = 74/164 (45.12%), Postives = 111/164 (67.68%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIN 525 +FY+PQRPY LG+LRDQ+IYP S ++ +H KG D L+ IL +V L ++++RE GWDA ++W+DVLS GE+QR+GMAR+F+HKPK+ +LDECT+A S+DVE ++++ AK GI+ ++ + RP+L +H+ L DGEG W ++ Sbjct: 543 MFYIPQRPYMSLGSLRDQVIYPDSVDD-------MHDKG--------YTDQDLERILHNVHLYHIVQREG-GWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKGAGISLLSITHRPSLWKYHT-HLLQFDGEGGWRFEQLD 689
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: ABCD3_HUMAN (ATP-binding cassette sub-family D member 3 OS=Homo sapiens GN=ABCD3 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.801e-35 Identity = 79/163 (48.47%), Postives = 104/163 (63.80%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTI 522 +FYVPQRPY LGTLRDQ+IYP RE+ + + + D LK L++V+L ++LERE GWD+ +W DVLS GE+QR+ MARLF+HKP+F ILDECT+A SVDVE +Y + +GIT T S R +L H L + DG GN+E + I Sbjct: 505 LFYVPQRPYMTLGTLRDQVIYPDGREDQKRKGIS---------------DLVLKEYLDNVQLGHILEREG-GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHM-DGRGNYEFKQI 650
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: ABCD3_MOUSE (ATP-binding cassette sub-family D member 3 OS=Mus musculus GN=Abcd3 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.149e-34 Identity = 78/163 (47.85%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTI 522 +FYVPQRPY LGTLRDQ+IYP +E+ + R + D LK L++V+L ++LERE GWD+ +W DVLS GE+QR+ MARLF+HKP+F ILDECT+A SVDVE+ +Y + +GIT T S L H L + DG GN+E + I Sbjct: 505 LFYVPQRPYMTLGTLRDQVIYPDGKEDQKKRGIS---------------DQVLKEYLDNVQLGHILEREG-GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHTKCLWKHHEYYLHM-DGRGNYEFKKI 650
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: ABCD2_RAT (ATP-binding cassette sub-family D member 2 OS=Rattus norvegicus GN=Abcd2 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.368e-34 Identity = 74/164 (45.12%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIN 525 +FY+PQRPY LG+LRDQ+IYP S ++ +H KG D L+ IL SV L ++++RE GWDA ++W+DVLS GE+QR+GMAR+F+HKPK+ +LDECT+A S+DVE ++++ A GI+ ++ + RP+L +H+ L DGEG W ++ Sbjct: 544 MFYIPQRPYMSLGSLRDQVIYPDSVDD-------MHEKG--------YTDRDLEHILHSVHLYHIVQREG-GWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAIGAGISLLSITHRPSLWKYHT-HLLQFDGEGGWRFEQLD 690
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: ABCD1_HUMAN (ATP-binding cassette sub-family D member 1 OS=Homo sapiens GN=ABCD1 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 5.704e-34 Identity = 70/164 (42.68%), Postives = 109/164 (66.46%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIN 525 +FY+PQRPY +G+LRDQ+IYP S E+ + + + L+ IL+ V L ++L+RE GW+A +W+DVLS GE+QR+GMAR+F+H+PK+ +LDECT+A S+DVE ++++ AKD GI ++ + RP+L +H+ L DGEG W+ ++ Sbjct: 539 MFYIPQRPYMSVGSLRDQVIYPDSVEDMQRKGYS---------------EQDLEAILDVVHLHHILQREG-GWEAMCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHT-HLLQFDGEGGWKFEKLD 685
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: ABCD2_MOUSE (ATP-binding cassette sub-family D member 2 OS=Mus musculus GN=Abcd2 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.271e-33 Identity = 73/164 (44.51%), Postives = 109/164 (66.46%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIN 525 +FY+PQRPY LG+LRDQ+IYP S ++ + KG D L+ IL SV L ++++RE GWDA ++W+DVLS GE+QR+GMAR+F+HKPK+ +LDECT+A S+DVE ++++ A GI+ ++ + RP+L +H+ L DGEG W ++ Sbjct: 544 MFYIPQRPYMSLGSLRDQVIYPDSADD-------MREKG--------YTDQDLERILHSVHLYHIVQREG-GWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAIGAGISLLSITHRPSLWKYHT-HLLQFDGEGGWRFEQLD 690
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: ABCD1_MOUSE (ATP-binding cassette sub-family D member 1 OS=Mus musculus GN=Abcd1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.271e-33 Identity = 70/164 (42.68%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 34 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGWDANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIN 525 +FY+PQRPY +G+LRDQ+IYP S E+ + + L+ IL V L ++L+RE GW+A +W+DVLS GE+QR+GMAR+F+H+PK+ +LDECT+A S+DVE ++++ AKD GI ++ + RP+L +H+ L DGEG W+ ++ Sbjct: 539 MFYIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCS---------------EQQLEAILGIVHLRHILQREG-GWEAVCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHT-HLLQFDGEGGWKFEKLD 685
BLAST of FC877040 vs. ExPASy Swiss-Prot
Match: PXA1_YEAST (Peroxisomal long-chain fatty acid import protein 2 OS=Saccharomyces cerevisiae GN=PXA1 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.032e-27 Identity = 72/168 (42.86%), Postives = 101/168 (60.12%), Query Frame = 1 Query: 34 IFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILESVRLSYLLEREEVGW---DANLNWEDVLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDG-EGNWELRTI 522 IF++PQ+PY G TLRDQIIYP+S +E R + D L IL V+L YLL+R VG DA +W+D+LS GE+QR+ AR+ FHKP + +LDE TNA SVD+E+ L+ L K F++ SQRP LI +H + L + + +G W+L+ + Sbjct: 679 IFFIPQKPYFSRGGTLRDQIIYPMSSDEFFDRGFR---------------DKELVQILVEVKLDYLLKRG-VGLTYLDAIADWKDLLSGGEKQRVNFARIMFHKPLYVVLDEATNAISVDMEDYLFNLLKRYRFNFISISQRPTLIKYHEMLLEIGENRDGKWQLQAV 830 The following BLAST results are available for this feature:
BLAST of FC877040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877040 ID=FC877040; Name=FC877040; organism=Citrus clementina; type=EST; length=626bpback to top |