FC877045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877045 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22 Identity = 49/114 (42.98%), Postives = 75/114 (65.79%), Query Frame = 2 Query: 254 IMEVKDIVELPNSPALSVAVAVKGNRKSRYAVLWALEKFIPEGINLFKLLHVRPRITSVPTPTSLAIGHPVGNFIPIEQVRDDVAAAYKQEEKWKTDRLLLPFRNMCAQRRVEV 595 + + + + LP P+ SVAVA+ G +KS+Y V WALEKFIPEG FKLL+VRP ++ +PTP +A+ + ++R+DV +AYKQE W + +L P++ M +R+V+V Sbjct: 7 VRALSEHLSLPPPPSPSVAVAINGKKKSKYVVFWALEKFIPEGFTDFKLLYVRPPVSYIPTPMGIAVA--------VSELREDVVSAYKQELDWSANEMLRPYKKMFERRKVQV 112
BLAST of FC877045 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.090e-21 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 284 PNSPALSVAVAVKGNRKSRYAVLWALEKFIPEGINLFKLLHVRPRITSVPTPTSLAIGHPVGNFIPIEQVRDDVAAAYKQEEKWKTDRLLLPFRNMCAQRRVEV*VKV 607 P P+ +V VA+ G+ KS+Y V WA+EKF EG FKLLH+ P ITSVPT P+GN IPI +VRDDV AY+QE W+++ +L P+ + +R+V V V V Sbjct: 15 PPPPSRTVVVALSGSSKSKYVVTWAIEKFATEGNVGFKLLHIHPMITSVPT--------PMGNAIPISEVRDDVVTAYRQEILWQSEEMLKPYTKLFVRRKVAVEVLV 114
BLAST of FC877045 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.901e-13 Identity = 38/105 (36.19%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 284 PNSPALSVAVAVKGNRKSRYAVLWALEKFIPEGINLFKLLHVRPRITSVPTPTSLAIGHPVGNFIPIEQVRDDVAAAYKQEEKWKT-DRLLLPFRNMCAQRRVEV 595 P+ P ++VA+A+ G+ KS+ + WAL KF + FKL+H+ P+IT++PT + GN + I + ++VAAAY+Q+ +T + LL PF+ MC ++++++ Sbjct: 28 PSEP-MTVALAISGSIKSKNVIKWALNKFGSDKNVTFKLIHIHPKITTLPTAS--------GNIVSISEELEEVAAAYRQKVMQETKETLLKPFKKMCERKKLKI 123 The following BLAST results are available for this feature:
BLAST of FC877045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877045 ID=FC877045; Name=FC877045; organism=Citrus clementina; type=EST; length=608bpback to top |