FC877079

Overview
NameFC877079
Unique NameFC877079
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length382
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10397 contig Ccv1_Contig10397:1..382. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.973e-36
Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 1
Query:   58 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEYPY*RANARFWAKFFDEKCVPEV 381
            +E VKLLG   SPF  RV+ ALKLKGV Y+++EENL NKS LLL+YNPV+KK+PV VHN +P+AESL+I+EYIDE WK NP+LP  PY RA ARFW+KF D+K V  V
Sbjct:    5 QEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAV 112          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.576e-35
Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 1
Query:   52 MAE-ESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEYPY*RANARFWAKFFDEK 366
            MAE E VKLLG WASPF+ RV+ ALKLKG+ YEYVEE L NKSPLLL  NP++KK+PVLVHNGK + ES +I+EYIDE W QNP+LP+ PY R+ ARF+AK  DE+
Sbjct:    1 MAEKEEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQ 106          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.364e-35
Identity = 69/105 (65.71%), Postives = 87/105 (82.86%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEYPY*RANARFWAKFFDEK 366
            MAE  VKLLG+W SPF+ RV+WALK+KGV YEY+EE+  NKS LLL+ NPVYKK+PVL+HNGKP+ ES++I+EYIDE ++   +LP+ PY RA ARFWAKF D+K
Sbjct:    1 MAE--VKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDK 103          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.082e-33
Identity = 69/110 (62.73%), Postives = 89/110 (80.91%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEYPY*RANARFWAKFFDEKCVPEV 381
            MAE  VKLLG+W SPF+ RV+WALK+KGV YEY+EE+  NKS LLL+ NP++KK+PVL+HNGK + ES++I+EYIDE ++   +LP+ PY RA ARFWAKF D+K VP V
Sbjct:    1 MAE--VKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDK-VPAV 107          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.846e-33
Identity = 67/105 (63.81%), Postives = 85/105 (80.95%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEYPY*RANARFWAKFFDEK 366
            MAE  VKLLG+W SPF  RV+WALKLKGV YEY+EE+  NKS LLL+ NPV+KK+PVL+HNGKP+ ES++I+EYIDE ++   +LP+ PY RA ARFW+KF  +K
Sbjct:    1 MAE--VKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDK 103          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.937e-32
Identity = 66/105 (62.86%), Postives = 87/105 (82.86%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEYPY*RANARFWAKFFDEK 366
            MAE  VKLLG   SPF+ RV+WALK+KGV YE++EE+L NKSPLLL+ NP++KKIPVL+HNGK + ES++I+EYIDEA++   +LP+ PY RA ARFWAK+ ++K
Sbjct:    1 MAE--VKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDK 103          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.479e-30
Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNP--LLPEYPY*RANARFWAKFFDEK 366
            MA E V LL +W S F +R++ AL  K + YEY EE+L NKSPLLL+ NP++KKIPVL+HNGKP+ ES++ +EYI+E WK     LLP  PY RA ARFWA + D+K
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKK 107          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.112e-29
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN--PLLPEYPY*RANARFWAKFFDEK 366
            MA E V LL +W S F +R++ AL  K + YEY +E+L NKSPLLL+ NP++KKIPVL+HNGKP+ ES++ +EYI+E WK     LLP  PY RA ARFWA + D+K
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKK 107          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.112e-29
Identity = 58/103 (56.31%), Postives = 77/103 (74.76%), Query Frame = 1
Query:   61 ESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWK-QNPLLPEYPY*RANARFWAKFFDEK 366
            + V LL  WAS + +R + AL  KGV YEY EENL N+SPLLL+ NP++KKIPVL+HNGKP+ ES +I++YIDE W  ++PL+P  PY R+ ARFW  + D+K
Sbjct:    3 DEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKK 105          
BLAST of FC877079 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.144e-29
Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN-PLLPEYPY*RANARFWAKFFDEK 366
            M   +V LL +  S F +R++ AL LKG+ YE  EENL +KSPLLL  NPV+KKIP+L+HNGKP+ ESL I+EYIDE W +  PLLP  PY R+ ARFWA + D K
Sbjct:    1 MESNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNK 106          
The following BLAST results are available for this feature:
BLAST of FC877079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX6_SOYBN3.973e-3665.74Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXA_ARATH2.576e-3567.92Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX2_TOBAC3.364e-3565.71Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC1.082e-3362.73Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC1.846e-3363.81Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU5.937e-3262.86Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX4_TOBAC9.479e-3057.01Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.112e-2956.07Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN2.112e-2956.31Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTX1_NICPL6.144e-2957.55Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2AC03RM1 EHR Citrus clementina cDNA clone KN0AAN2AC03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877079 ID=FC877079; Name=FC877079; organism=Citrus clementina; type=EST; length=382bp
GCACGAGGCATTTAGATATTATCACGCGCTGCTTTTGCTTGGCGAGCAAT
AATGGCTGAAGAAAGTGTGAAGTTGCTGGGTTACTGGGCAAGCCCCTTTG
CTCTTAGAGTTAAGTGGGCGCTCAAACTGAAGGGAGTTCACTACGAATAT
GTTGAAGAGAATCTCCCCAACAAGAGTCCCTTGCTGTTGCGATACAATCC
GGTTTATAAGAAGATTCCAGTTCTTGTACACAATGGGAAACCATTGGCAG
AATCACTACTGATCATCGAATACATTGATGAAGCGTGGAAACAAAATCCT
CTCCTCCCAGAATATCCTTACTAACGGGCCAATGCACGTTTCTGGGCAAA
ATTCTTTGATGAGAAGTGTGTACCTGAAGTCA
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