FC877116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE3_BACTN (Glutamate dehydrogenase OS=Bacteroides thetaiotaomicron GN=gdhA PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31 Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 ++F +L +LKG C+VSGSG +A + +EK+I G V+ SD+ GY+ D DG D K+ ++ ++K+ R +R+Y++ Y KY + AKPW E+CD+A P A+QNE++ A LV +GC + EG+NMP TPEAV V + A +L AP Sbjct: 212 IYFLMEMLKTKGTDLKGKVCLVSGSGNVAQYTIEKVIELGGKVVTCSDSDGYIYDPDGIDREKLDYIMELKNLYRGRIREYAEKYG-CKYVEGAKPWGEKCDIALPSATQNELNGDHARQLVANGCIAVSEGANMPSTPEAVRVFQDAKILYAP 364
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_PRERU (NAD(P)-specific glutamate dehydrogenase OS=Prevotella ruminicola GN=gdhA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.640e-29 Identity = 60/154 (38.96%), Postives = 102/154 (66.23%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 V+F + +L + L+G +VSGSG +A + +EKL+ GA PV+ SD+ GY+ D DG D K++F+ ++K+ +R +++Y++ Y KY + A+PW E+ D+A PCA+Q+EI++++A L+ +G + EG+NMP P A+ V + A +L P Sbjct: 212 VYFLEDMLKTRGESLEGKTVLVSGSGNVAQYTIEKLLQLGAKPVTCSDSNGYIYDPDGIDAEKLAFIMELKNVKRGRIKEYAEKYG-VKYVENARPWGEKADIATPCATQDEINEAEAKTLIANGVFAVSEGANMPTEPAAIKVFQDAKILYCP 364
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_HAEIN (NADP-specific glutamate dehydrogenase OS=Haemophilus influenzae GN=gdhA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.143e-28 Identity = 62/155 (40.00%), Postives = 101/155 (65.16%), Query Frame = 3 Query: 9 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 L++FAQ +LA+ G VSGSG +A + +EK ++ GA V+ SD+ GY+ D +GF K++ L DIK+ +R ++DY++ + +Y++ +PW + D+A PCA+QNE++ SDA L+ +G +++ EG+NMP T EA + L A+VL P Sbjct: 215 LIYFAQAMLAEKGDSFAGKVVSVSGSGNVAQYAIEKALSLGAKVVTCSDSSGYVYDPNGFTTEKLAALFDIKNTKRGRVKDYAEQFGL-QYFEGKRPWEVQVDIALPCATQNELELSDAQRLIKNGVKLVAEGANMPTTIEATEALLAADVLFGP 368
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_CHLSO (NADP-specific glutamate dehydrogenase (Fragment) OS=Chlorella sorokiniana PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.799e-28 Identity = 65/157 (41.40%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY--DEAKPWNERC--DVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 V F + +L D + LKG RC+VSG+G +A + E L+ GAI +S+SD++GY+ + +GF ++ ++D+K + S R S+ + + Y D KPW C D+AFPCA+QNEID+ DA L+ GC+ +VEG+NMP T EA+ KA ++ P Sbjct: 290 VLFVENVLKDKGESLKGKRCLVSGAGNVAQYCAELLLEKGAIVLSLSDSQGYVYEPNGFTREQLQAVQDMKKKNNSAR-ISEYKSDTAVYVGDRRKPWELDCQVDIAFPCATQNEIDEHDAELLIKHGCQYVVEGANMPSTNEAIHKYNKAGIIYCP 445
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_PSYT1 (NADP-specific glutamate dehydrogenase OS=Psychrobacter sp. (strain TAD1) GN=gdhA PE=1 SV=4) HSP 1 Score: 123.635 bits (309), Expect = 1.389e-27 Identity = 61/153 (39.87%), Postives = 99/153 (64.71%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 V+F Q +LA N+ ++G + +VSG+G +++H EK GAI ++VSD+KG + D G + KI +L+ K Q + L DY + + ++ + KPW+ + D+A P A+QNEI++ DA LV++G + +VEG+NMP T EA+D ++ V AP Sbjct: 212 VYFLQNMLAAQNESIEGKKVLVSGAGNVSLHAAEKATLIGAIVLTVSDSKGTIYDAKGLNQEKIDWLKVQKDQHKPLADYVEVFG-GEWMADQKPWSIKADIAIPSATQNEINEEDAKLLVDNGVKYIVEGANMPLTAEAIDYIRLHRVHYAP 363
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_SALTY (NADP-specific glutamate dehydrogenase OS=Salmonella typhimurium GN=gdhA PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25 Identity = 62/155 (40.00%), Postives = 97/155 (62.58%), Query Frame = 3 Query: 9 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK-SQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 LV+F + +L +G+R VSGSG +A + +EK +A+GA V+ SD+ G +VDE GF K++ L +IK S+ + DY++ + + Y + +PW+ D+A PCA+QNE+D A L+ +G + + EG+NMP T EA D+ +A VL AP Sbjct: 215 LVYFTEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAMAFGARVVTASDSSGTVVDESGFTPEKLARLCEIKASRDGRVADYAREFGLT-YLEGQQPWSVPVDIALPCATQNELDVDAARVLIANGVKAVAEGANMPTTIEATDLFLEAGVLFAP 368
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_SALTI (NADP-specific glutamate dehydrogenase OS=Salmonella typhi GN=gdhA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25 Identity = 62/155 (40.00%), Postives = 97/155 (62.58%), Query Frame = 3 Query: 9 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK-SQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 LV+F + +L +G+R VSGSG +A + +EK +A+GA V+ SD+ G +VDE GF K++ L +IK S+ + DY++ + + Y + +PW+ D+A PCA+QNE+D A L+ +G + + EG+NMP T EA D+ +A VL AP Sbjct: 215 LVYFTEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAMAFGARVVTASDSSGTVVDESGFTPEKLARLCEIKASRDGRVADYAREFGLT-YLEGQQPWSVPVDIALPCATQNELDVDAARVLIANGVKAVAEGANMPTTIEATDLFLEAGVLFAP 368
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_COREF (NADP-specific glutamate dehydrogenase OS=Corynebacterium efficiens GN=gdh PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.698e-25 Identity = 57/154 (37.01%), Postives = 95/154 (61.69%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 V+F Q ++ + L+G + +VSGSG +A + ++K+ GA+ V SD+ G++ +G D K LR+IK +R+ + Y+ ++Y+ + W+ D+A PCA+QNE+D +A L ++GCR + EG+NMP TPEA+DV ++ VL P Sbjct: 217 VYFVQEMIKAEGETLEGKKVIVSGSGNVATYAIQKVQELGAVVVGFSDSSGWVSTPNGVDVAK---LREIKEVRRARVSSYADEVEGAEYHTDGSIWDLTADIALPCATQNELDGDNARTLADNGCRFVAEGANMPSTPEAIDVFRERGVLFGP 367
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_ECOLI (NADP-specific glutamate dehydrogenase OS=Escherichia coli (strain K12) GN=gdhA PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.941e-25 Identity = 60/155 (38.71%), Postives = 96/155 (61.94%), Query Frame = 3 Query: 9 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK-SQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 470 LV+F + +L +G+R VSGSG +A + +EK + +GA ++ SD+ G +VDE GF K++ L +IK S+ + DY+K + Y + +PW+ D+A PCA+QNE+D A L+ +G + + EG+NMP T EA ++ ++A VL AP Sbjct: 215 LVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKASRDGRVADYAKEFGLV-YLEGQQPWSLPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAP 368
BLAST of FC877116 vs. ExPASy Swiss-Prot
Match: DHE4_GIALA (NADP-specific glutamate dehydrogenase OS=Giardia lamblia PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.463e-24 Identity = 59/158 (37.34%), Postives = 90/158 (56.96%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPW---NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPA 473 V+F + + D N ++G ++SGSG +A EKLI GA ++ SD+ G +VD+DGF+ K++ L +K+++R + ++ Y YY+ KPW + D PCA+QNE+ DA LV G + + EG+NMP T EAV V V+ PA Sbjct: 213 VYFLEEMCKDNNTVIRGKNVLLSGSGNVAQFACEKLIQLGAKVLTFSDSNGTIVDKDGFNEEKLAHLMYLKNEKRGRVSEFKDKYPSVAYYEGKKPWECFEGQMDCIMPCATQNEVSGDDATRLVGLGLKFVAEGANMPSTAEAVHVYHAKGVMYGPA 370 The following BLAST results are available for this feature:
BLAST of FC877116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877116 ID=FC877116; Name=FC877116; organism=Citrus clementina; type=EST; length=860bpback to top |