FC877147

Overview
NameFC877147
Unique NameFC877147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10432 contig Ccv1_Contig10432:1..687. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC877147 vs. ExPASy Swiss-Prot
Match: FIP37_ARATH (FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana GN=FIP37 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.799e-13
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 1 
Query:  325 SLQNCKDTLATCQLELEAAKSEIQKWHSSFQNELFIPPGTSP 450
            SL+NCKD LA+CQ ELE+AK+EIQKW S+FQNE F+P G SP
Sbjct:   60 SLKNCKDDLASCQNELESAKTEIQKWKSAFQNESFVPAGKSP 101

HSP 2 Score: 26.5646 bits (57), Expect = 6.799e-13
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 3 
Query:  171 APGVATGMILSLR 209
            APGV TGMILSLR
Sbjct:   46 APGVRTGMILSLR 58
The following BLAST results are available for this feature:
BLAST of FC877147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FIP37_ARATH6.799e-1371.43FKBP12-interacting protein of 37 kDa OS=Arabidopsi... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAN2AF11RM1 EHR Citrus clementina cDNA clone KN0AAN2AF11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877147 ID=FC877147; Name=FC877147; organism=Citrus clementina; type=EST; length=687bp
GCACGAGGGCTTCACGGACTCATCTCGACGATGACGACGATTTTGGCGGC
GATTTTTCTGCTAATCATAATTCTAGACGTTCTGGCTCGAAGAGAAGCTT
CGGTGATATTGAAGATGACGAGGACGATATTTTTGGTTCAAGAAAGGCTA
ATTCAAAAGTGGAAGAAACTGCTCCTGGAGTTGCAACTGGGATGATTTTG
TCTCTGCGTGAGAGGTTTTATAAAACCACTGAAATCTCTTACTTTGCTGC
TTAGATTCCTAATACTAGTGGTTGTCATGTAGTATTCTTCAAAGCTTCAT
TTTATTCTTGGGATTTTCTTTTGCAGTCTTCAGAACTGTAAGGACACACT
TGCAACATGCCAATTGGAACTTGAAGCTGCGAAGTCGGAGATTCAGAAGT
GGCATTCTTCATTCCAAAATGAGCTCTTCATACCTCCTGGGACATCTCCT
GGTTAGCCTTTCCATAGATTGTTGTACTTGCTCATTTTCAAGTTTATTTA
AACGTGTAATTTTTCTTTTCTTTTTGGTAATCATATCATAAGTTCTTTAT
TTACGTTTCAGACAATTTATGTCTATTTTCTATTCTTTGTAGAACCTAGA
TTAGTCATCAATTATCTTCAGACCCTAAAATCCTCCGAGGAGATGCTGAA
GGAACAGTTAGAAAAAGCAAAGAAAAAGGAAGCTGCC
back to top