FC877185

Overview
NameFC877185
Unique NameFC877185
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 121/137 (88.32%), Postives = 131/137 (95.62%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 512
            MANAASGMAV DDCKLKFLELKAKRTYRFI++KIEEKQK+VVVEKLGEP++SYE+FTA LPADECRYAVYDFDF+T EN QKS+I FIAWSPDT++VRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDV RSR
Sbjct:    1 MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSR 137          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.201e-64
Identity = 118/139 (84.89%), Postives = 131/139 (94.24%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518
            MANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+GEP++SYE+F ASLP +ECRYAVYDFDFVT ENCQKS+I FIAW PDT++VRSKMIYASSKDRFKRELDGIQVELQA DPTEMGLDV++SR N
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.381e-63
Identity = 118/139 (84.89%), Postives = 129/139 (92.81%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518
            MANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YE+F ASLPADECRYA+YDFDFVT ENCQKSKI FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPTEM LDV++SR N
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 1.804e-63
Identity = 115/139 (82.73%), Postives = 132/139 (94.96%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518
            MANAASGMAVDD+CKLKFLELKAKRTYRFI++KI+EK+K VVVEK+GEP  +Y++F ASLPA+ECRYA++D+DFVT+ENCQKSKI FIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVELQATDPTE+GLDV+R R N
Sbjct:    1 MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.019e-63
Identity = 118/139 (84.89%), Postives = 126/139 (90.65%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518
            MANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+G+P  +YE F A LPADECRYA+YDFDFVT ENCQKSKI FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPTEM LDV RSR N
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.804e-62
Identity = 116/139 (83.45%), Postives = 127/139 (91.37%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518
            MANAASGMAV DDCKLKF+ELKAKRT+R IV+KIE+KQ  V+VEKLGEP  SY++F ASLPAD+CRY +YDFDFVT ENCQKSKI FIAWSPDT+KVR KMIYASSKDRFKRELDGIQVELQATDPTEMGLDV +SRTN
Sbjct:    1 MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.438e-60
Identity = 108/137 (78.83%), Postives = 130/137 (94.89%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 512
            M+N+ASGMAV D+CKLKFLELKAKR++RFIVFKI EK +QVVV++LG+P +SY++FTA LPADECRYAV+DFDFVTDENCQKSKI FI+W+PDTS+VRSKM+YASSKDRFKRELDGIQVELQATDP+EM +D+++SR
Sbjct:    1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSR 137          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.094e-60
Identity = 107/139 (76.98%), Postives = 125/139 (89.93%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518
            MAN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++KLG P ++YE+FT S+P DECRYAVYD+DF T ENCQKSKI FIAWSPDTS+VRSKM+YASSKDRFKRELDGIQVELQATDP+EM LD+++ R N
Sbjct:    1 MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.210e-59
Identity = 105/139 (75.54%), Postives = 128/139 (92.09%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518
            MAN+ASGM V+D+CK+KFLELKAKRTYRFIVFKI+EK +QV +EKLG P ++Y++FT+S+P DECRYAVYDFDF T++NCQKSKI FIAWSPDTS+VRSKM+YASSKDRFKRE++GIQVELQATDP+EM LD+++ R N
Sbjct:    1 MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139          
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.580e-59
Identity = 105/137 (76.64%), Postives = 129/137 (94.16%), Query Frame = 3
Query:  102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 512
            MAN++SGMAVDD+CKLKF+ELKAKR +RFIVFKIEEK +QV VE+LG+P++SY++FT  LP +ECRYAV+DFDFVTDENCQKSKI FI+WSPDTS+VRSKM+YAS+KDRFKRELDGIQVELQATDP+EM +D++++R
Sbjct:    1 MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKAR 137          
The following BLAST results are available for this feature:
BLAST of FC877185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ADF2_PETHY3.288e-6588.32Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF1_PETHY6.201e-6484.89Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF4_ARATH1.381e-6384.89Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF7_ORYSJ1.804e-6382.73Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF1_ARATH4.019e-6384.89Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF2_ARATH5.804e-6283.45Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF1_ORYSJ2.438e-6078.83Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]
ADF10_ARATH7.094e-6076.98Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]
ADF8_ARATH1.210e-5975.54Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF_LILLO1.580e-5976.64Actin-depolymerizing factor OS=Lilium longiflorum ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2AH08RM1 EHR Citrus clementina cDNA clone KN0AAN2AH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877185 ID=FC877185; Name=FC877185; organism=Citrus clementina; type=EST; length=680bp
GCACGAGGGCCGCATCTGTCCTTCTCTCTCTTTCTCACTATAGAATCCCT
AGATTTTCTCTCAATTTCCCTCATTTTCTCTCCCCTTTTTTTCTCCAGAA
AATGGCAAATGCAGCATCTGGAATGGCAGTCGACGATGACTGCAAGCTGA
AGTTTTTGGAATTGAAGGCAAAAAGGACTTACCGCTTCATAGTTTTCAAG
ATTGAAGAGAAGCAGAAGCAGGTTGTTGTGGAGAAGCTTGGTGAACCATC
TGATAGTTATGAGAATTTCACTGCTAGCCTCCCAGCGGATGAGTGCCGAT
ACGCTGTCTACGATTTTGACTTTGTGACTGATGAGAACTGCCAGAAGAGC
AAGATTATTTTCATTGCATGGTCCCCCGACACCTCAAAGGTGAGAAGCAA
GATGATTTATGCTAGCTCCAAGGACAGGTTCAAGAGAGAATTGGATGGAA
TTCAGGTAGAGTTGCAGGCTACTGATCCTACTGAGATGGGTCTTGATGTC
ATGAGAAGCCGCACAAATTAAATTTTAGACTTGCCTATGGTGCAATGGAA
AGCCCATACTATATTGTTCACTTAAATGTAATGTCTATATCTTTTATGAC
TTATAACTTGCTTTGCTATCAGCTTGTGGTCGGAGTTAAATACTTTTTTA
AGTTGTCTTCTCATTTGTTATATCTGTGGA
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