FC877230

Overview
NameFC877230
Unique NameFC877230
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length775
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10453 contig Ccv1_Contig10453:1..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: MAFL2_DICDI (Maf-like protein DDB_G0281937 OS=Dictyostelium discoideum GN=DDB_G0281937 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.391e-34
Identity = 77/192 (40.10%), Postives = 123/192 (64.06%), Query Frame = -2
Query:  196 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLITEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKE 771
            +ILGSSS+ R+++L +MGY F  M+ DIDEK+IR   P+ L + I+ AKA+A+L R+   D   + + +I+I  DQV+V+ GVIREKP + ++ R +++ Y       V SV+V N++TG      D     F +I DE I+KLI++G V++ AGG   EH  +  +  Q+ G +++++GLPK +T+ LI +
Sbjct:    6 LILGSSSIWRKQVLIDMGYIFKTMSPDIDEKAIRDSDPKTLTLLISRAKAQALLKRIKESDDELDKK-SIMICSDQVIVHNGVIREKPETEQQCREYLQSYEFHPAVAVVSVVVVNIETGKIVEGTDIATQHFKKISDEFIDKLIKQGDVMHCAGGFTVEH--MADFTLQLEGEVETILGLPKTLTKNLISQ 194          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y2288_ALKMQ (Maf-like protein Amet_2288 OS=Alkaliphilus metalliredigens (strain QYMF) GN=Amet_2288 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.679e-15
Identity = 52/183 (28.42%), Postives = 97/183 (53.01%), Query Frame = -2
Query:  226 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLITEHSLILPYVKQVVGAMDSVMGLP 774
            ++IL S+S  R++IL  +  +F ++ +D+DE    K+ P  +V  +A  KAE + NR+            I+I  D +VV  G+I  KP ++++AR  ++  SG     +  ++V +  +G+   +    E+   +I DE IE+ I  G  ++ AG    +    + +V+++VG   +V+GLP
Sbjct:    3 RLILASNSPRRKEILQNLHVKFDIIVSDVDEVFNEKDHPAKIVETLAYLKAEDVANRID--------RDAIIIGADTIVVKNGII-GKPKNKQDARDILRTLSGDVHEVITGIVVLDTSSGYTVIDHVVTEVYMKKITDEEIERYIATGEPMDKAGAYGIQGRAAV-FVEKIVGDYYNVVGLP 175          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y1346_IDILO (Maf-like protein IL1346 OS=Idiomarina loihiensis GN=IL1346 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.654e-14
Identity = 52/160 (32.50%), Postives = 80/160 (50.00%), Query Frame = -2
Query:  292 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLITE 771
            +ILGS S  RR+IL  +   + V+  DIDE +I  E P+ LV  +AEAKA A+  R+         +  I+I  DQV V +G I  KP +RE A R +  + G        + V N +    +   +  E++F ++  E IE+ +E     + AG   +E
Sbjct:    5 LILGSGSKYRREILDRLHLNYDVVKPDIDESAISSESPQQLVGRLAEAKARAVEKRMTY-------DNAIIIGSDQVAVCDGNILGKPGNRENAVRQLSSFIGKTVTFYTGLAVFNTEAQQCEVRVEPFEVEFRQLTAEEIERYVELENPFDCAGSFKSE 157          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y4557_COLP3 (Maf-like protein CPS_4557 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=CPS_4557 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.645e-13
Identity = 59/195 (30.26%), Postives = 99/195 (50.77%), Query Frame = -2
Query:  193 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSV-LVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLITEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 774
            K+IL S S  RR++LA++GY+FSV A+DIDE   + E   D V+ +A+ KA+ +L+ LP  + +     + ++  D  VV+ G I  KP + E     +   SG Q   + ++ LV++      KG+    E+ F  +    I      G   + AG    +  +   +VK + G+  +V+GLP   T +L+  A
Sbjct:   17 KLILASQSPRRRELLAQLGYQFSVQASDIDETVEKAETAYDYVLRLAKQKAQHVLDLLPEAERVY----SYVLGSDTSVVFNGEILGKPDNEENCIDTLSLLSGNQHQVLTAIALVSHAGV---KGQVITTEVTFKTLTKAEISAYWLTGEPQDKAGSYGIQ-GIAGQFVKTINGSYSAVVGLPLYETAQLLANA 203          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y1353_ANASK (Maf-like protein AnaeK_1353 OS=Anaeromyxobacter sp. (strain K) GN=AnaeK_1353 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.149e-13
Identity = 59/197 (29.95%), Postives = 97/197 (49.24%), Query Frame = -2
Query:  193 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRV---EIQFHEIPDEVIEKLIEEGIVLNVAGGLITEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 774
            +++L S S  RR++LA++G    +  AD DE+ +  E P D V+ +A  KA A+      GD        +++  D  VV  G +  KP   ++ARR ++  SG +   +  V V     G    E D V   E+ F  + D  I+  +  G  L+ AG    + S    +V++V G++ +V+GLP A T  L++ A
Sbjct:    4 RLVLASQSPRRRELLAQLGLALEIRPADTDERVLPGEPPRDYVLRVAREKARAV-----PGD--------LVLAADTAVVLGGEVLGKPRDADDARRMLRALSGTRHEVLTGVCVRR-NAGALGVELDAVVATEVAFARLGDGEIDWYVGTGEPLDKAGAYAIQGS-GGAFVEEVRGSVSNVVGLPLAETAALLRRA 185          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y1450_ANAD2 (Maf-like protein A2cp1_1450 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=A2cp1_1450 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.665e-13
Identity = 58/197 (29.44%), Postives = 98/197 (49.75%), Query Frame = -2
Query:  193 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRV---EIQFHEIPDEVIEKLIEEGIVLNVAGGLITEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 774
            +++L S S  RR++LA++G    +  AD DE+ +  E P D V+ +A  KA A+      GD        +++  D  VV  G +  KP   ++ARR ++  SG +   + +V V    +     E D V   E+ F  + D  I+  +  G  L+ AG    + S    +V++V G++ +V+GLP A T  L++ A
Sbjct:    4 RLVLASQSPRRRELLAQLGLALEIRPADTDERVLPGEPPRDYVLRVAREKARAV-----PGD--------LVLAADTAVVLGGEVLGKPRDADDARRMLRALSGTRHEVLTAVCVRRNASALGV-ELDAVVATEVAFARLGDAEIDWYVGTGEPLDKAGAYAIQGS-GGAFVEEVRGSVSNVVGLPLAETAALLRRA 185          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y2502_ANADE (Maf-like protein Adeh_2502 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=Adeh_2502 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.787e-13
Identity = 57/197 (28.93%), Postives = 94/197 (47.72%), Query Frame = -2
Query:  193 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRV---EIQFHEIPDEVIEKLIEEGIVLNVAGGLITEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 774
            +++L S S  RR++L ++G    V  AD DE+ +  E P D V+ +A  KA A+                +++  D  VV  G +  KP   E+ARR ++  SG +   +  V V    +     E D V   E+ F  + D  I+  +  G  L+ AG    + S    +V++V G++ +V+GLP A T  L++ A
Sbjct:    4 RLVLASQSPRRRELLGQLGLALDVRPADTDERVLPGEPPRDYVLRVAREKARAVPGE-------------VVLAADTAVVLGGEVLGKPRDAEDARRMLRALSGTRHEVLTGVCVRRNASALGV-ELDAVVATEVAFARLGDAEIDWYVGTGEPLDKAGAYAIQGS-GGAFVQEVRGSVSNVVGLPLAETAALLRRA 185          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y3686_GEOUR (Maf-like protein Gura_3686 OS=Geobacter uraniireducens (strain Rf4) GN=Gura_3686 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.252e-13
Identity = 56/182 (30.77%), Postives = 84/182 (46.15%), Query Frame = -2
Query:  226 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLITEHSLILPYVKQVVGAMDSVMGLP 771
            IIL S+S  R ++L+  G EF V+A D+DE  +  E PED V+ +A AKAE         D  +++     I  D +VV EG I  KP    +A R +   SG     V    V + +      +  R  + F  + DE I   I  G   + AG    +       V+++ G+  +V+GLP
Sbjct:    8 IILASASPRRVELLSSAGIEFEVVAGDVDEGLLSGETPEDHVVRLARAKAE---------DVARKSGGRFYIGADTIVVCEGEIMGKPKDSADAERMLNKLSGIPHEVVTGFAVYDKERDGVITDAVRTRVYFKHLRDEEIRAYIATGCPFDKAGAYAIQGGAAY-MVQKIEGSYSNVVGLP 179          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y2688_VIBPA (Maf-like protein VP2688 OS=Vibrio parahaemolyticus GN=VP2688 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.252e-13
Identity = 56/195 (28.72%), Postives = 104/195 (53.33%), Query Frame = -2
Query:  190 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITG-DQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLITEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEAL 771
            ++L S S  R+++LA++GY+F ++  DI+E     E+ +D V+ ++  KA+A L           A+P  ++ G D VVV +  + EKP S E+++R + D SG +   + +V V + +   +       ++ F  +  E IE+  + G   + AG    +  L   +V ++ G+  +V+GLP   T++LI+E L
Sbjct:    7 LVLASGSPRRKELLAQLGYDFDIVLPDIEEAKQADEQAQDYVLRLSLEKAQAGL---------ALAKPDSVVLGSDTVVVCDDRVLEKPKSFEDSKRMLTDLSGRRHQVMTAVSVVSSEQ--QHSVVVTTDVWFKPLTHEEIEQYWQSGEPCDKAGSYGIQ-GLGGRFVTRIEGSYHAVVGLPLFETDQLIQEFL 189          
BLAST of FC877230 vs. ExPASy Swiss-Prot
Match: Y1556_THEMA (Maf-like protein TM_1556 OS=Thermotoga maritima GN=TM_1556 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.165e-13
Identity = 56/194 (28.87%), Postives = 101/194 (52.06%), Query Frame = -2
Query:  196 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVGSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGL-ITEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKE 774
            +IIL SSS  RR+++  +G EF V   D++E+ +  E PE+ V  ++  KAE +  +       ++ E  ++I  D VVV +G I  KP S EEA+  +K  SG        V   + +T  +       +++F E+P+ VI+  +E+   L+ AG   I + + +  +V+++ G   +V+G P  +  + + E
Sbjct:    2 RIILASSSPRRRQLMELLGIEFEVEKPDVEEEFL--ESPEETVRELSLRKAEWVFKK-------RKEEEILVIGSDTVVVLDGNILGKPESLEEAKGMLKKLSGKWHVVYTGVAFVSSET--KDVIVSSTKVRFRELPESVIDYYVEKYRPLDKAGAYGIQDFAAV--FVEKIEGDFFTVVGFPLGMVWQYLYE 182          
The following BLAST results are available for this feature:
BLAST of FC877230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
MAFL2_DICDI8.391e-3440.10Maf-like protein DDB_G0281937 OS=Dictyostelium dis... [more]
Y2288_ALKMQ6.679e-1528.42Maf-like protein Amet_2288 OS=Alkaliphilus metalli... [more]
Y1346_IDILO5.654e-1432.50Maf-like protein IL1346 OS=Idiomarina loihiensis G... [more]
Y4557_COLP31.645e-1330.26Maf-like protein CPS_4557 OS=Colwellia psychreryth... [more]
Y1353_ANASK2.149e-1329.95Maf-like protein AnaeK_1353 OS=Anaeromyxobacter sp... [more]
Y1450_ANAD23.665e-1329.44Maf-like protein A2cp1_1450 OS=Anaeromyxobacter de... [more]
Y2502_ANADE4.787e-1328.93Maf-like protein Adeh_2502 OS=Anaeromyxobacter deh... [more]
Y3686_GEOUR6.252e-1330.77Maf-like protein Gura_3686 OS=Geobacter uraniiredu... [more]
Y2688_VIBPA6.252e-1328.72Maf-like protein VP2688 OS=Vibrio parahaemolyticus... [more]
Y1556_THEMA8.165e-1328.87Maf-like protein TM_1556 OS=Thermotoga maritima GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2BB11RM1 EHR Citrus clementina cDNA clone KN0AAN2BB11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877230 ID=FC877230; Name=FC877230; organism=Citrus clementina; type=EST; length=775bp
TTTTTTTAACCACAGATGGTAAATTTAGCTATTTGCAATATAAAATATTA
AACCTCTGCTGGTCTTTACAATCAAGATTCTATATATAAATTAGCAGTAA
CATACTAACATTATATAGCTGTTTTGCACTTGAGATGACTAGTGTCCATC
ATGTGAAAAATCAGTAAATAGAAAATGACTGCCATTTTAAAGTGCTTCCT
TTATGAGTTTCTCGGTTACTGCTTTTGGAAGTCCCATCACACTGTCCATC
GCCCCGACCACTTGTTTAACATAGGGCAAAATCAAAGAATGTTCGGTAAT
TAGTCCCCCAGCAACATTAAGCACAATTCCCTCCTCAATCAGCTTCTCAA
TTACTTCATCTGGTATCTCATGGAACTGGATCTCCACCCTGTCCCACTCT
CCTTTTCTGAATCCTGTTTTAAGGTTTGTGACAAGAACAGAACCCACTGT
GGCACATTGCCCACCAGAATAATCTTTTATGAATCGCCGGGCTTCCTCCC
TGCTGGATGGTTTTTCTCTGATTACACCTTCATAGACCACCACTTGATCA
CCAGTAATTAATATGGTTGGCTCAGCTTCCTTTATGTAGTCACCAATGGG
GAGCCTATTTAAGATGGCTTCTGCCTTAGCTTCAGCAATAGCCATGACTA
AATCTTCAGGCTTCTCCTTTCGAATACTTTTCTCATCAATATCTGCAGCC
ATGACACTGAATTCATATCCCATTTCCGCCAATATTTTTCGACGTGGCAT
TGAAGATGAGCCCAGAATTATCTTG
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