FC877233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877233 vs. ExPASy Swiss-Prot
Match: TPK1_HUMAN (Thiamin pyrophosphokinase 1 OS=Homo sapiens GN=TPK1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.905e-17 Identity = 53/156 (33.97%), Postives = 88/156 (56.41%), Query Frame = 3 Query: 3 GGANRVYDELPQLFPHEDPSDIRRRYKPDLIKGDMDSIRKEVMDFYASLGTKVVDESHDQDTTDLHKCVAYIRDCTPNLEKSNLR---ILVAGALGGRFDHEAGNINVLYRFSDIR---IILLSDDCHIQLLPKTHRHDIYIQSSVEGPHCGLIPI 452 GGANR+YD R + P+ I GD DSIR EV ++YA+ G +++ + DQD TD KC+ ++ +E+ +L+ I+ G L GRFD ++N L++ + I II++ ++ I LL + +H +++ + +EG CGLIP+ Sbjct: 47 GGANRLYDIT---------EGERESFLPEFINGDFDSIRPEVREYYATKGCELI-STPDQDHTDFTKCLKMLQ---KKIEEKDLKVDVIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLL-QPGKHRLHVDTGMEGDWCGLIPV 188
BLAST of FC877233 vs. ExPASy Swiss-Prot
Match: TPK1_MOUSE (Thiamin pyrophosphokinase 1 OS=Mus musculus GN=Tpk1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.476e-16 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 3 GGANRVYDELPQLFPHEDPSDIRRRYKPDLIKGDMDSIRKEVMDFYASLGTKVVDESHDQDTTDLHKCVAYIRDCTPNLEKSNLRILVAGALGGRFDHEAGNINVLYR---FSDIRIILLSDDCHIQLLPKTHRHDIYIQSSVEGPHCGLIPI 452 GGAN +YD L E R + P+ + GD DSIR EV ++Y G ++ + DQD TD KC+ ++ E I+ G LGGRFD ++N L++ + + II++ D I LL + +H +++ + +EG CGLIP+ Sbjct: 47 GGANHLYD----LTEGE-----RESFLPEFVSGDFDSIRPEVKEYYTKKGCDLI-STPDQDHTDFTKCLQVLQRKIEEKELQVDVIVTLGGLGGRFDQIMASVNTLFQATHITPVPIIIIQKDSLIYLL-QPGKHRLHVDTGMEGSWCGLIPV 188
BLAST of FC877233 vs. ExPASy Swiss-Prot
Match: TPK1_BOVIN (Thiamin pyrophosphokinase 1 OS=Bos taurus GN=TPK1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.789e-15 Identity = 49/156 (31.41%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 3 GGANRVYDELPQLFPHEDPSDIRRRYKPDLIKGDMDSIRKEVMDFYASLGTKVVDESHDQDTTDLHKCVAYIRDCTPNLEKSNLR---ILVAGALGGRFDHEAGNINVLY---RFSDIRIILLSDDCHIQLLPKTHRHDIYIQSSVEGPHCGLIPI 452 GGAN +YD R + P+ I GD DSIR EV + YA G +++ + DQD TD KC+ ++ +E+ +L+ I+ G L GRFD +++ L+ + + + +I++ ++ I LL + +H +++ + +EG CGLIP+ Sbjct: 47 GGANHLYDVT---------EGERESFLPEFISGDFDSIRPEVREHYAIKGCEII-STPDQDHTDFTKCLEVLQ---KKIEEKDLQVDMIVTLGGLAGRFDQIMASVSTLFQAPQITSLPVIIIQEESLIYLL-QPGKHKLHVDTGMEGDWCGLIPV 188 The following BLAST results are available for this feature:
BLAST of FC877233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877233 ID=FC877233; Name=FC877233; organism=Citrus clementina; type=EST; length=462bpback to top |