FC877243

Overview
NameFC877243
Unique NameFC877243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10452 contig Ccv1_Contig10452:1..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI_SPIOL (Glucose-6-phosphate isomerase, cytosolic OS=Spinacia oleracea GN=PGIC PE=2 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.338e-92
Identity = 167/207 (80.68%), Postives = 186/207 (89.86%), Query Frame = 1
Query:  142 MASSTLICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MA STLICDT+ W++LK HV EIKKTHLRDLMSD DRC+SMMVEFDG+LLDYSRQNAT  TM KL+QLAEA+ L +KIN+M+NGE INSTENRSVLHVALRA RDA IN DGKNVVP+VW+VLDKI++FSE IRSGSWVG TGK L +VVAVGIGGSFLGPLFVHTALQT+  A ECA+GRQLRFLANVDPIDVAK+I+GLNPETTL
Sbjct:    1 MAPSTLICDTDSWQNLKTHVAEIKKTHLRDLMSDADRCKSMMVEFDGLLLDYSRQNATHDTMSKLFQLAEASHLKDKINQMFNGEHINSTENRSVLHVALRASRDAVINGDGKNVVPDVWQVLDKIRDFSEKIRSGSWVGVTGKPLTNVVAVGIGGSFLGPLFVHTALQTESEAAECAKGRQLRFLANVDPIDVAKNISGLNPETTL 207          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI_ARATH (Glucose-6-phosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=PGIC PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.338e-92
Identity = 166/208 (79.81%), Postives = 189/208 (90.87%), Query Frame = 1
Query:  142 MASST-LICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MASST LICDTE WKDLK HV++IKKTHLRDLMSD +RCQSMM+EFDG+LLDYSRQ AT++TMDKL  LA+A+QL  KI+RM+NGE INSTENRSVLHVALRAP+DA I +DG NVVPEVW VLDKIKEFS+ IRSGSWVGATGK LKDV+A+GIGGSFLGPLFVHTALQTD  A+E A+GRQLRFLAN+DP+DVA++I+GLNPETTL
Sbjct:    1 MASSTALICDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRATVETMDKLLNLAKASQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGMNVVPEVWNVLDKIKEFSDKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGRQLRFLANIDPVDVARNISGLNPETTL 208          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI_ARAGE (Glucose-6-phosphate isomerase, cytosolic OS=Arabis gemmifera GN=PGIC PE=3 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.338e-92
Identity = 167/208 (80.29%), Postives = 187/208 (89.90%), Query Frame = 1
Query:  142 MASST-LICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MASST L CDTE WKDLK HV++IKKTHLRDLMSD +RCQSMM+EFDG+LLDYSRQ A ++TMDKL  LA+AAQL  KI+RM+NGE INSTENRSVLHVALRAP+DA I +DGKNVVPEVW VLDKIKEFSE IRSGSWVGATGK LKDV+A+GIGGSFLGPLFVHTALQTD  A+E A+GRQLRFLAN+DP+DVA++I GLNPETTL
Sbjct:    1 MASSTALFCDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRAPVETMDKLLNLAKAAQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGKNVVPEVWNVLDKIKEFSEKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGRQLRFLANIDPVDVARNIKGLNPETTL 208          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI_ARALP (Glucose-6-phosphate isomerase, cytosolic OS=Arabidopsis lyrata subsp. petraea GN=PGIC PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.252e-90
Identity = 165/208 (79.33%), Postives = 186/208 (89.42%), Query Frame = 1
Query:  142 MASST-LICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MASST LI DTE WKDLK HV++IKKTHLRDLM+D +RCQSMM+EFDG+LLDYSRQ A ++TMDKL  LA+AAQL  KI+RM+NGE INSTENRSVLHVALRAP+DA I +DGKNVV EVW VLDKIKEFSE IRSGSWVGATGK LKDV+A+GIGGSFLGPLFVHTALQTD  A+E A+GRQLRFLAN+DP+DVA++I GLNPETTL
Sbjct:    1 MASSTALISDTEAWKDLKGHVEDIKKTHLRDLMTDANRCQSMMMEFDGLLLDYSRQRAPVETMDKLLNLAKAAQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGKNVVQEVWNVLDKIKEFSEKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGRQLRFLANIDPVDVARNIIGLNPETTL 208          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI_OENME (Glucose-6-phosphate isomerase, cytosolic OS=Oenothera mexicana GN=PGIC PE=3 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.433e-86
Identity = 157/207 (75.85%), Postives = 183/207 (88.41%), Query Frame = 1
Query:  142 MASSTLICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MAS  LI +TE WKDLK HV++IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T++KLY+LA+AA L  KI+RMYNG+ INSTENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FSE +R+GSWVGATGK LKDV+AVGIGGSFLGPLFVHTALQTD  A + ARGR+LRFLANVDPID A++I+GL+PETTL
Sbjct:    1 MASPALISETEAWKDLKAHVEDIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLDPETTL 207          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI2_CLAXA (Glucose-6-phosphate isomerase, cytosolic 2 OS=Clarkia xantiana GN=PGIC2 PE=3 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.871e-86
Identity = 157/207 (75.85%), Postives = 183/207 (88.41%), Query Frame = 1
Query:  142 MASSTLICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MA+ +LI +TE WKDLK H++ IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T++KLY+LAEAA L  KI+RMYNG+ INSTENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FSE +R+GSWVGATGK LKDV+AVGIGGSFLGPLFVHTALQTD  A + ARGR+LRFLANVDPID A++I+GLNPETTL
Sbjct:    1 MATPSLISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLAEAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLNPETTL 207          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI1_CLAMI (Glucose-6-phosphate isomerase, cytosolic 1 OS=Clarkia mildrediae GN=PGIC1 PE=3 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.871e-86
Identity = 157/207 (75.85%), Postives = 181/207 (87.44%), Query Frame = 1
Query:  142 MASSTLICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MAS  LI +TE WKDLK H++ IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A   T+ KLY+LA+AA L  KI+RMYNG+ INSTENRSVLHVALRAPRD+AI SDGKNVVP+VW VLDKIK+FS+ +R+GSW+GATGK LKDV+AVGIGGSFLGPLFVHTALQTD  A + ARGR+LRFLANVDPIDVA++I+GLNPETTL
Sbjct:    1 MASPALISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQAIPDTIKKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRDSAICSDGKNVVPDVWNVLDKIKDFSDRVRNGSWIGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTL 207          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI2_CLALE (Glucose-6-phosphate isomerase, cytosolic 2A OS=Clarkia lewisii GN=PGIC2-A PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.444e-86
Identity = 157/207 (75.85%), Postives = 182/207 (87.92%), Query Frame = 1
Query:  142 MASSTLICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MA+  LI +TE WKDLK H++ IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T++KLY+LAEAA L  KI+RMYNG+ INSTENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FSE +R+GSWVGATGK LKDV+AVGIGGSFLGPLFVHTALQTD  A + ARGR+LRFLANVDPID A++I+GLNPETTL
Sbjct:    1 MATPALISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLAEAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLNPETTL 207          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI1_CLAAR (Glucose-6-phosphate isomerase, cytosolic 1 OS=Clarkia arcuata GN=PGIC1 PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.444e-86
Identity = 155/207 (74.88%), Postives = 183/207 (88.41%), Query Frame = 1
Query:  142 MASSTLICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MAS  LI +TE WKDLK H++ IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T++KLY+LA+AA L  KI+RMYNG+ INSTENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FS+ +R+GSW+GATGK LKDV+AVGIGGSFLGPLFVHTALQTD  A + ARGR+LRFLANVDPIDVA++I+GLNPE+TL
Sbjct:    1 MASPALISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASSDTINKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSDRVRNGSWIGATGKKLKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPESTL 207          
BLAST of FC877243 vs. ExPASy Swiss-Prot
Match: G6PI1_CLALE (Glucose-6-phosphate isomerase, cytosolic 1A OS=Clarkia lewisii GN=PGIC1-A PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 9.287e-86
Identity = 155/207 (74.88%), Postives = 182/207 (87.92%), Query Frame = 1
Query:  142 MASSTLICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLXAIECARGRQLRFLANVDPIDVAKSITGLNPETTL 762
            MAS  LI +TE WKDLK H++ IK THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T+ KLY+LA+AA L  KI+RMYNG+ IN+TENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FS+++R+GSW+GATGK LKDV+AVGIGGSFLGPLFVHTALQTD  A + ARGR+LRFLANVDPIDVA++I+GLNPETTL
Sbjct:    1 MASPALISETEAWKDLKAHLEGIKMTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASPDTISKLYKLADAAHLKQKIDRMYNGDHINTTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSDSVRNGSWIGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTL 207          
The following BLAST results are available for this feature:
BLAST of FC877243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 405
Match NameE-valueIdentityDescription
G6PI_SPIOL1.338e-9280.68Glucose-6-phosphate isomerase, cytosolic OS=Spinac... [more]
G6PI_ARATH1.338e-9279.81Glucose-6-phosphate isomerase, cytosolic OS=Arabid... [more]
G6PI_ARAGE1.338e-9280.29Glucose-6-phosphate isomerase, cytosolic OS=Arabis... [more]
G6PI_ARALP1.252e-9079.33Glucose-6-phosphate isomerase, cytosolic OS=Arabid... [more]
G6PI_OENME1.433e-8675.85Glucose-6-phosphate isomerase, cytosolic OS=Oenoth... [more]
G6PI2_CLAXA1.871e-8675.85Glucose-6-phosphate isomerase, cytosolic 2 OS=Clar... [more]
G6PI1_CLAMI1.871e-8675.85Glucose-6-phosphate isomerase, cytosolic 1 OS=Clar... [more]
G6PI2_CLALE2.444e-8675.85Glucose-6-phosphate isomerase, cytosolic 2A OS=Cla... [more]
G6PI1_CLAAR5.444e-8674.88Glucose-6-phosphate isomerase, cytosolic 1 OS=Clar... [more]
G6PI1_CLALE9.287e-8674.88Glucose-6-phosphate isomerase, cytosolic 1A OS=Cla... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2BC12RM1 EHR Citrus clementina cDNA clone KN0AAN2BC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877243 ID=FC877243; Name=FC877243; organism=Citrus clementina; type=EST; length=762bp
GCACGAGGCCTCGTGCCGGCACGAGGGCTTCATGCTTTTTGGTTCTTACG
CTCTCTATATTTCCAATTGCCCGCAATCCACCTCATCCAATTCTTCTACA
AATCTCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCA
TCAACTCTAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGT
GCAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATC
GATGCCAATCAATGATGGTGGAGTTTGACGGGATTCTGTTGGACTACTCA
CGGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGA
GGCTGCTCAACTCAATAATAAGATTAACCGGATGTACAATGGGGAAAAAA
TTAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCA
AGGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTTTG
GAAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTT
CCTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGT
ATTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAAC
TGATCTANAAGCCATAGAATGTGCAAGAGGACGCCAGTTGCGATTTCTAG
CAAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCC
GAAACTACCCTT
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