FC877252

Overview
NameFC877252
Unique NameFC877252
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH1_TOBAC (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 3.578e-88
Identity = 150/225 (66.67%), Postives = 173/225 (76.89%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPEAFMTWKLIQQWKDGISLRVGVILPDLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEIFGGCDCRNGCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFDATRTYXP 676
            GLYKIQESW EK K GCNVFKYK +RV GQPEAF  WK IQQWKDG++ RVGVILPDLTSGAE+ PV LVNDVDDEKGPA+FTY+ SLKY++P         C C  GC PGD  C CIQ N G+LPY+S GVL++ K+L+HECG +C CPP CRNR+SQGG +  LEVFKTK++GWGLRSWDPIR G FICEYAG+VID       G  + D+Y+FDATR Y P
Sbjct:  387 GLYKIQESWAEKNKVGCNVFKYKLLRVPGQPEAFKVWKSIQQWKDGVASRVGVILPDLTSGAESQPVCLVNDVDDEKGPAYFTYIPSLKYSKPFVMPRPSPSCHCVGGCQPGDSNCACIQSNGGFLPYSSLGVLLSYKTLIHECGSACSCPPNCRNRMSQGGPKARLEVFKTKNRGWGLRSWDPIRGGGFICEYAGEVID------AGNYSDDNYIFDATRIYAP 605          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH3_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.320e-74
Identity = 125/223 (56.05%), Postives = 165/223 (73.99%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPEAFMTWKLIQQWKDGISLRVGVILPDLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEIFGGCDCRNGCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFDATRTY 670
            GLY I ESW EKGKSGCN FKYK +R  GQP AF  WK +Q+WK+G++ R G+ILPDLTSGAE+ PVSLVNDVD++KGPA+FTY +SLKY++     +   GC C   C PG+  C CI+KN G LPY +  +LV+++ +++ECGP+C C  +C+NRV Q GL+  LEVFKT+++GWGLRSWD +RAG+FICEYAG+V D   +   G +  D Y+FD +R +
Sbjct:  330 GLYSISESWVEKGKSGCNTFKYKLVRQPGQPPAFGFWKSVQKWKEGLTTRPGLILPDLTSGAESKPVSLVNDVDEDKGPAYFTYTSSLKYSETFKLTQPVIGCSCSGSCSPGNHNCSCIRKNDGDLPYLNGVILVSRRPVIYECGPTCPCHASCKNRVIQTGLKSRLEVFKTRNRGWGLRSWDSLRAGSFICEYAGEVKDNGNLR--GNQEEDAYVFDTSRVF 550          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH1_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.551e-74
Identity = 126/225 (56.00%), Postives = 164/225 (72.89%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPEAFMTWKLIQQWKDGISLRVGVILPDLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEIFGGCDCRNGCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFDATRTYXP 676
            GLY+I+ESW EKGKSG N FKYK +R  GQP AF +W  IQ+WK G+  R G+ILPD+TSG E+IPVSLVN+VD + GPA+FTY  ++KY++    ++   GCDC N C PG+  C CI+KN G  PYT NG+LV++K +++EC PSC C  TC+N+V+Q G++V LEVFKT ++GWGLRSWD IRAG+FIC Y G+  D SK+++      DDY FD T  Y P
Sbjct:  332 GLYEIKESWVEKGKSGHNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLILPDMTSGVESIPVSLVNEVDTDNGPAYFTYSTTVKYSESFKLMQPSFGCDCANLCKPGNLDCHCIRKNGGDFPYTGNGILVSRKPMIYECSPSCPC-STCKNKVTQMGVKVRLEVFKTANRGWGLRSWDAIRAGSFICIYVGEAKDKSKVQQTMAN--DDYTFDTTNVYNP 553          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH5_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.388e-46
Identity = 98/221 (44.34%), Postives = 136/221 (61.54%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPEAFMTWKLIQQWKDGISLRVGVILPDLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKY---AQPVDSLEIFGGCDCRNGCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFD 655
            GLY ++E W E G  G  VFK+K  R+ GQPE  + WK + + K     R G+   D+T G E +P+  VN++DDEK P  F Y A + Y    +P+        C C NGC      C CI KN G +PY  +G +V  K LV+ECGP C+CPP+C  RVSQ G+++ LE+FKT+ +GWG+RS + I  G+FICEYAG++++  + E L G+  D+YLFD
Sbjct:  490 GLYLVEEYWEETGSHGKLVFKFKLRRIPGQPE--LPWKEVAKSKKS-EFRDGLCNVDITEGKETLPICAVNNLDDEKPPP-FIYTAKMIYPDWCRPIPPKS----CGCTNGCSKSKN-CACIVKNGGKIPYY-DGAIVEIKPLVYECGPHCKCPPSCNMRVSQHGIKIKLEIFKTESRGWGVRSLESIPIGSFICEYAGELLEDKQAESLTGK--DEYLFD 698          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH9_ARATH (Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.779e-46
Identity = 96/201 (47.76%), Postives = 127/201 (63.18%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPE-AFMTWKLIQQWKDG-ISLRV-GVILPDLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKYAQP--VDSLEIFGGCDCRNGCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAG 589
            GL++I +SW + GKSG  VFKY+  R+ GQ E      K  +  K   +S+R  G I  D+++G EN+PV L ND+D ++ P ++ YLA   +     V       GCDC NGC  G   C C  KN+G + Y  NG L+ QK L+HECG +CQCPP+CRNRV+Q GLR  LEVF++ + GWG+RS D + AGAFICEYAG
Sbjct:  327 GLFRIVDSWFDVGKSGFGVFKYRLERIEGQAEMGSSVLKFARTLKTNPLSVRPRGYINFDISNGKENVPVYLFNDIDSDQEPLYYEYLAQTSFPPGLFVQQSGNASGCDCVNGCGSG---CLCEAKNSGEIAYDYNGTLIRQKPLIHECGSACQCPPSCRNRVTQKGLRNRLEVFRSLETGWGVRSLDVLHAGAFICEYAG 524          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH7_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.196e-45
Identity = 104/233 (44.64%), Postives = 142/233 (60.94%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPEAFMTWKLIQQWK--DGISLRVGVILPDLTSGAENIPVSLVNDVD--DEKGPAHFTYLASLKYAQPVDSLEIFG----GC-DCRNG-CVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFDATRTY 670
            G+Y + + WT  GKSG   F++K +R   QP A+  WK ++  +  D I  R G IL DL+ GAE + V LVN+VD  D+  P  F Y+ S  ++  +     F     GC +CR+  C+   Q C C+Q+N   LPY +N +LV +K L++ECG SC CP  C  R+ Q GL++HLEVFKT++ GWGLRSWDPIRAG FICE+AG      ++EE      DDYLFD ++ Y
Sbjct:  348 GMYLVSKFWTVTGKSGFKEFRFKLVRKPNQPPAYAIWKTVENLRNHDLIDSRQGFILEDLSFGAELLRVPLVNEVDEDDKTIPEDFDYIPSQCHSGMMTHEFHFDRQSLGCQNCRHQPCM--HQNCTCVQRNGDLLPYHNN-ILVCRKPLIYECGGSCPCPDHCPTRLVQTGLKLHLEVFKTRNCGWGLRSWDPIRAGTFICEFAGLRKTKEEVEE-----DDDYLFDTSKIY 572          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH6_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.055e-43
Identity = 90/227 (39.65%), Postives = 135/227 (59.47%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPEAFMTWKLIQQWKDGISLRVGVILPDLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKY---AQPVDSLEIFGGCDCRNGCVPGD-QICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFDATRTY 670
            GLY +++ W + G  G NVFK++  R+ GQPE  ++W  +++ K     R G+   D++ G E  P+S VN++DDEK P  FTY   L Y    +PV        C C   C   + ++C C++KN G +PY  +G +V  K  ++ECGP C+CP +C  RV+Q G+++ LE+FKTK +GWG+R    I  G+FICEY G++++ S+ E   G   D+YLFD    Y
Sbjct:  457 GLYLVEKYWQQVGSHGMNVFKFQLRRIPGQPE--LSWVEVKKSKS--KYREGLCKLDISEGKEQSPISAVNEIDDEKPPL-FTYTVKLIYPDWCRPVPPKS----CCCTTRCTEAEARVCACVEKNGGEIPYNFDGAIVGAKPTIYECGPLCKCPSSCYLRVTQHGIKLPLEIFKTKSRGWGVRCLKSIPIGSFICEYVGELLEDSEAERRIGN--DEYLFDIGNRY 672          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH8_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 OS=Arabidopsis thaliana GN=SUVH8 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.286e-41
Identity = 99/227 (43.61%), Postives = 135/227 (59.47%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPEAFMTWKLIQQWKDG--ISLRVGVILPDLTSGAENIPVSLVNDVDDEKG--PAHFTYLASLKYAQPVDSLEIFGGCDCRNGCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFDATRTY 670
            GLY + + W   GKSG   +++K +R  GQP  +  WKL++  ++   I  R G IL DL+ G E + V LVN+VD+E    P  F Y+ S  Y+   + + +      ++      Q C CI KN G LPY  N +LV +K L++ECG SC   PT   R+ + GL++HLEVFKT + GWGLRSWDPIRAG FICE+ G    +SK +E   E+ DDYLFD +R Y
Sbjct:  423 GLYLVSDCWQVTGKSGFKEYRFKLLRKPGQPPGYAIWKLVENLRNHELIDPRQGFILGDLSFGEEGLRVPLVNEVDEEDKTIPDDFDYIRSQCYSGMTNDVNVDSQSLVQSYI---HQNCTCILKNCGQLPYHDN-ILVCRKPLIYECGGSC---PT---RMVETGLKLHLEVFKTSNCGWGLRSWDPIRAGTFICEFTG----VSKTKEEVEED-DDYLFDTSRIY 634          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH2_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2 OS=Arabidopsis thaliana GN=SUVH2 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.629e-40
Identity = 89/209 (42.58%), Postives = 121/209 (57.89%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQP---EAFMTWKLIQQWKDGISLRVGVILPDLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEIFG-------GCDCRNGCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVI 598
            GLYKI + W   GKSG  VFK++ +R+ GQP    A M +    + K  +    G +  DL++  EN+PV L NDVD ++ P H+ Y+A   +        IFG       GC+C+  C      C C +KN G   Y  NG L+  K +V ECG  C C P+C++RV+Q GLR  LEVF++K+ GWG+R+ D I AGAFICEYAG V+
Sbjct:  329 GLYKIVDWWFAVGKSGFGVFKFRLVRIEGQPMMGSAVMRFAQTLRNKPSMVRPTGYVSFDLSNKKENVPVFLYNDVDGDQEPRHYEYIAKAVFPPG-----IFGQGGISRTGCECKLSCTDD---CLCARKNGGEFAYDDNGHLLKGKHVVFECGEFCTCGPSCKSRVTQKGLRNRLEVFRSKETGWGVRTLDLIEAGAFICEYAGVVV 529          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH4_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.928e-33
Identity = 81/228 (35.53%), Postives = 122/228 (53.51%), Query Frame = 2
Query:    2 GLYKIQESWTEKGKSGCNVFKYKFIRVHGQPEA------FMTWKLIQQWKDGISLRVGVILPDLTSGAENIPVSLVNDVDDE--KGPAHFTYLASLKYAQPVDSLEIFGGCDCRNGCVPGDQICPCIQKNAGYLPYT--SNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFD 655
            GLYK+++ W +KG SG  V+KY+  R+ GQPE       F+  ++        S   G++  D++ G E   +   N VDD      + FTY+ SL     V   +   GC+CR  C    + C C + N G  PY   ++G L+  + +V ECGP C C P C NR SQ  LR +LEVF++  KGW +RSW+ I AG+ +CEY G V   + ++ +     ++Y+F+
Sbjct:  277 GLYKVEKFWAQKGVSGFTVYKYRLKRLEGQPELTTDQVNFVAGRI----PTSTSEIEGLVCEDISGGLEFKGIPATNRVDDSPVSPTSGFTYIKSLIIEPNVIIPKSSTGCNCRGSCTDSKK-CACAKLNGGNFPYVDLNDGRLIESRDVVFECGPHCGCGPKCVNRTSQKRLRFNLEVFRSAKKGWAVRSWEYIPAGSPVCEYIGVVRRTADVDTISD---NEYIFE 496          
The following BLAST results are available for this feature:
BLAST of FC877252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
SUVH1_TOBAC3.578e-8866.67Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH3_ARATH1.320e-7456.05Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH1_ARATH6.551e-7456.00Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH5_ARATH3.388e-4644.34Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH9_ARATH5.779e-4647.76Probable histone-lysine N-methyltransferase, H3 ly... [more]
SUVH7_ARATH2.196e-4544.64Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH6_ARATH2.055e-4339.65Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH8_ARATH4.286e-4143.61Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH2_ARATH1.629e-4042.58Histone-lysine N-methyltransferase, H3 lysine-9, H... [more]
SUVH4_ARATH1.928e-3335.53Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2BD09RM1 EHR Citrus clementina cDNA clone KN0AAN2BD09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877252 ID=FC877252; Name=FC877252; organism=Citrus clementina; type=EST; length=677bp
TGGTCTTTATAAAATCCAGGAGTCATGGACTGAGAAAGGAAAGTCAGGCT
GCAATGTATTCAAATATAAGTTTATTAGGGTACATGGGCAGCCTGAAGCA
TTTATGACATGGAAACTGATTCAGCAATGGAAGGATGGTATCTCTTTGAG
AGTTGGGGTCATATTACCAGATCTTACTTCCGGGGCAGAAAACATACCTG
TTTCTCTTGTAAATGATGTTGATGATGAGAAAGGGCCTGCACATTTTACA
TATTTGGCTAGTCTCAAGTATGCTCAACCAGTTGATTCACTTGAAATTTT
TGGTGGCTGTGACTGCCGCAATGGATGTGTCCCTGGTGATCAAATTTGTC
CATGCATTCAAAAAAATGCTGGCTATCTTCCGTATACTTCAAATGGTGTT
CTTGTGACTCAAAAATCCTTAGTGCATGAGTGTGGTCCTTCTTGTCAGTG
TCCTCCTACCTGCCGGAACCGAGTGTCTCAAGGTGGCCTGAGAGTACATT
TGGAGGTGTTTAAAACTAAGGATAAAGGCTGGGGTCTTAGGTCTTGGGAT
CCCATCCGTGCTGGGGCTTTCATATGTGAATATGCAGGGCAGGTTATTGA
CATTTCGAAGATAGAGGAACTTGGAGGTGAAAATGTAGATGATTATCTTT
TTGATGCTACCCGTACATATCANCCTG
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