FC877259
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_HUMAN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.146e-43 Identity = 95/206 (46.12%), Postives = 126/206 (61.17%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLK-QDGILCSFS 741 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L HRTQILY DI+ + M LEL PG +V R +APTGH++T +FH+QRA ARE+F+ V +VTV +D+ GF S +AD++FLD+P PW A+ A LK + G CSFS Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF--GVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFS 207
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_RAT (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 9.236e-43 Identity = 94/206 (45.63%), Postives = 129/206 (62.62%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLK-QDGILCSFS 741 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L HRTQILY DI+ + M LEL PG +V R++APTGH++T +FH+QRA ARE+F++ VS +VTV +D+ GF +AD++FLD+P PW A+ A LK + G CSFS Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSIAPTGHLHTVEFHQQRADKAREEFQQHRVSQWVTVHTQDVCRSGF--GVVHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFS 207
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_MOUSE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Mus musculus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.575e-42 Identity = 94/206 (45.63%), Postives = 128/206 (62.14%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLK-QDGILCSFS 741 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L HRTQILY DI+ + M LEL PG +V R+VAPTGH++T +FH+QRA ARE+F+ +S +VTV +D+ GF +AD++FLD+P PW A+ A LK + G CSFS Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVICSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSVAPTGHLHTVEFHQQRADKAREEFQEHRLSQWVTVHTQDVCCSGF--GVVHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFS 207
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_BOVIN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Bos taurus GN=TRMT61A PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.510e-42 Identity = 95/206 (46.12%), Postives = 126/206 (61.17%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLK-QDGILCSFS 741 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L HRTQILY DI+ + M LEL PG +V R +APTGH++T +FH+QRA ARE+F+ V +VTV +D+ GF S +AD++FLD+P PW A+ A LK + G CSFS Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALLTMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAERAREEFQEHRVGRWVTVLNQDVCRSGF--GVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFS 207
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_DICDI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum GN=trmt61a PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.091e-39 Identity = 83/203 (40.89%), Postives = 125/203 (61.58%), Query Frame = 1 Query: 142 RCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQG-QGF-PDEFSGLADSIFLDLPQPWLAIPSAKKMLKQDGILCSFS 741 + IKEGD V++Y D M + + N+ + ++FG+++H + IGK +GS + S+ G GF +++A TPELW++ L HRTQIL+ DIS +I LEL G AR +AP GH++TF+FHE+R AR+DF+ G+ ++TV RD G +GF + + D++FLDLP PW AI +A ++ +LCSFS Sbjct: 6 KIIKEGDRVVMYNGKDNMAVLTMESNNVYNSKFGSYRHKNIIGKEYGSKLSSDNGNGFCHVIAMTPELWSITLDHRTQILFNLDISTIIFNLELKNGSRAVESGTGSGSLSSSIARTIAPKGHLFTFEFHEERVKFARKDFKDNGLDQYITVTHRDACGKEGFLRQDINNDIDAVFLDLPSPWDAIENAIAVMHDGSMLCSFS 208
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_CRYNE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans GN=TRM61 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.889e-33 Identity = 80/202 (39.60%), Postives = 119/202 (58.91%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG--GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLKQDGI--LCSFS 741 I+ GD+VI+Y D M A+ + F N++G + H IG+ +GS + S G+V++L PTPELWTL L HRTQILY+ DIS++ M L + G V +R+V P+G V +F++H QR +A ++FE G+++ V + R++ +GF D + +FLDLP PW AIP A K L++D I +C FS Sbjct: 14 IEAGDIVILYMARDNMTAITITPGETFHNKYGRYPHDMLIGQKYGSKIHSPPPHPGYVHVLRPTPELWTLSLPHRTQILYLPDISYITMRLGVRVGGKVIEAGTGSGSMTHSLSRSVGPSGQVMSFEYHRQRFETALKEFESHGLTN-VRLQHRNVCKEGFGDAQG--VEGVFLDLPAPWEAIPHAVKALRRDIITRICCFS 212
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_KLULA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis GN=TRM61 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.521e-32 Identity = 84/223 (37.67%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGV--SSFVTVGVRDIQGQGF--------PDEFSG--------LADSIFLDLPQPWLAIPSAKKMLKQDG--ILCSFS 741 IKEGDLV+ + D +K + V F R+GAF HSD IGKPFGS + SN+ GF+++L PTPELW++ L HRTQI+Y D S+++ +E P V AR+ GH+++++FHE R A+++F+ G+ + T+ RD+ GF EF G AD IFLDLP PW AIP+ ++ ++ LC FS Sbjct: 11 IKEGDLVLAWLSRDNLKPITVKAGEVFNTRYGAFSHSDMIGKPFGSQIAIRTKGSNRFGFIHVLQPTPELWSISLPHRTQIVYTPDSSYIMQRMECNPRSRVIEAGTGSGSFSHAFARS---AGHLFSYEFHEVRYEQAKQEFKEHGLLEAGNTTITHRDVCKDGFEIKNGDTTSHEFRGPEETKVELNADCIFLDLPAPWDAIPNLTSVISKEKKVNLCCFS 230
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_CANAL (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida albicans GN=TRM61 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.251e-31 Identity = 79/200 (39.50%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFP-DEFSGLADSIFLDLPQPWLAIPSAKKML---KQDGILC 732 I+EGDLV+ Y +K + V + F R+G F+H IG +G + KG GF++LL PTPELWTL L HRTQI+Y D S++I L + PG V AR V +G V+T++FHE R A+++ E + + T+ RD+ GF D S D +FLDLP PW AIP ++ K GI C Sbjct: 10 IEEGDLVLAYISRSTIKPINVKKGEIFNTRYGHFEHDKMIGMKYGEQMPGAKGYGFIHLLHPTPELWTLSLPHRTQIVYSPDSSYIIQRLNVKPGSRVIEAGTGSASFTHSFARTVTLSGKVFTYEFHEPRYLEAKKELEEHKLDN-TTITHRDVCNDGFSIDNESIEGDVVFLDLPSPWDAIPHLDSVISTSKAAGICC 208
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_DEBHA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii GN=TRM61 PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.059e-30 Identity = 74/208 (35.58%), Postives = 109/208 (52.40%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF-----PDEFSG----LADSIFLDLPQPWLAIPSAKKMLKQD---GILC 732 I+EGDLV+ + +K + V + S R+G F+H IG +G + KG GF++LL PTPELWT+ L HRTQI+Y D S++I L + G V AR + G ++T++FHE R A+++ E G+ + + RD+ GF P++F D +FLDLP PW AIP+ K ++ GI C Sbjct: 10 IEEGDLVLAFLGRSNIKPITVTKGSQLNTRYGNFEHDRMIGMKYGEQMPGAKGVGFIHLLYPTPELWTVSLPHRTQIVYTPDSSYIIQRLNVTSGTRVIEAGTGSGSFSHSFARTIGVEGRLFTYEFHEPRYIEAKKELEDHGLLANTVITHRDVCNDGFEISNIPEDFKKDDGICGDVVFLDLPSPWTAIPNLKSVISHQSRVGICC 217
BLAST of FC877259 vs. ExPASy Swiss-Prot
Match: TRM61_YEAST (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Saccharomyces cerevisiae GN=GCD14 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.257e-30 Identity = 85/221 (38.46%), Postives = 115/221 (52.04%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTG-VSSFVTVGVRDIQGQGF--------PDEF-------SGLADSIFLDLPQPWLAIPSAKKMLKQDGI--LCSFS 741 IKEGDL +++ D +K V++ F R+G+F H D IGKP+GS + SNK FV++L PTPELWTL L HRTQI+Y D S+++ L P V AR+V GH+++F+FH R A E+F+ G + VT+ RD+ GF EF S A+ +FLDLP PW AIP ++ D LC FS Sbjct: 13 IKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGFLIKKGDTTSYEFGNNETAASLNANVVFLDLPAPWDAIPHLDSVISVDEKVGLCCFS 230 The following BLAST results are available for this feature:
BLAST of FC877259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877259 ID=FC877259; Name=FC877259; organism=Citrus clementina; type=EST; length=743bpback to top |