FC877879

Overview
NameFC877879
Unique NameFC877879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length903
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10470 contig Ccv1_Contig10470:1..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 7.161e-54
Identity = 102/205 (49.76%), Postives = 139/205 (67.80%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVRQKENGLLEL 901
            +DHF FAD+ TF QRYL+   HW      G I  Y GNEGDI WF  N+GF+WD+A    AMLVF EHRYYGES+P+G    +++++  L++LT+EQALADFA  I +L++ +  A+  PV+  GGSYGGMLAAW R+KYPHI +GALA+SAPI Q + +VP   F  IV++DF++    C  +I++SW  +  +    +GL  L
Sbjct:   55 VDHFGFADMRTFKQRYLVADKHW--QRNGGSILFYTGNEGDIVWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGQD--SFKDSQHLNFLTSEQALADFAELIRHLEKTIPGAQGQPVIAIGGSYGGMLAAWFRMKYPHIVVGALAASAPIWQLDGMVPCGEFMKIVTNDFRKSGPYCSESIRKSWNVIDKLSGSGSGLQSL 255          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: PCP_PONAB (Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.353e-54
Identity = 102/202 (50.50%), Postives = 137/202 (67.82%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVRQKENGL 892
            +DHF F  + TF+QRYL+   +W      G I  Y GNEGDI WF  N+GF+WD+A    AMLVF EHRYYGES+P+G     ++++  L++LT+EQALADFA  I +LK+ +  AE  PV+  GGSYGGMLAAW R+KYPH+ +GALA+SAPI QFED+VP   F  IV++DF++    C  +I+ SW  +  +    +GL
Sbjct:   57 VDHFGFNTVKTFNQRYLVADKYW--KKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDN--TFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPHCSESIRRSWDAINRLSNTGSGL 254          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: PCP_HUMAN (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.595e-53
Identity = 102/202 (50.50%), Postives = 137/202 (67.82%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVRQKENGL 892
            +DHF F  + TF+QRYL+   +W      G I  Y GNEGDI WF  N+GF+WD+A    AMLVF EHRYYGES+P+G    +++++  L++LT+EQALADFA  I +LK+ +  AE  PV+  GGSYGGMLAAW R+KYPH+ +GALA+SAPI QFED+VP   F  IV++DF++    C  +I  SW  +  +    +GL
Sbjct:   57 VDHFGFNTVKTFNQRYLVADKYW--KKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDN--SFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPHCSESIHRSWDAINRLSNTGSGL 254          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.703e-52
Identity = 103/202 (50.99%), Postives = 134/202 (66.34%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVRQKENGL 892
            +DHF F    TF QRYLI  ++W      G I  Y GNEGDI WF  N+GF+WDIA    AMLVF EHRYYGES+P+G+   ++ ++  L++LT EQALADFA  I  LK+ +  A    V+  GGSYGGMLAAW R+KYPH+ +GALASSAPI QF D+VP + F  IV++DF +   +C  +I+ SW  +  + +K  GL
Sbjct:   59 VDHFGFNIDRTFKQRYLIADNYWKEDG--GSILFYTGNEGDIIWFCNNTGFMWDIAEEMKAMLVFAEHRYYGESLPFGAD--SFSDSRHLNFLTTEQALADFAKLIRYLKRTIPGARNQHVIALGGSYGGMLAAWFRMKYPHLVVGALASSAPIWQFNDLVPCDIFMKIVTTDFSQSGPNCSESIRRSWDAINRLAKKGTGL 256          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: DPP2_RAT (Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp7 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.823e-42
Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = 2
Query:  290 LDHFSFADLP--TFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG--STEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGEL 862
            +DHF+F      TF QR+L++   W      GPIF Y GNEGDI   A NSGF+ ++A +  A+LVF EHRYYG+S+P+G  ST+  Y        LT EQALADFAV +  L+ NL  + +P + FGGSYGGML+A+MR+KYPH+  GALA+SAP++    +  P+ F+  V++DF  +S  C   +++++ ++
Sbjct:   50 MDHFNFESFSNKTFGQRFLVSDKFWKMGE--GPIFFYTGNEGDIWSLANNSGFIVELAAQQEALLVFAEHRYYGKSLPFGVQSTQRGYTQL-----LTVEQALADFAVLLQALRHNLGVQDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVIAVAGLGNPDQFFRDVTADFYGQSPKCAQAVRDAFQQI 237          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: DPP2_HUMAN (Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 4.815e-42
Identity = 89/193 (46.11%), Postives = 127/193 (65.80%), Query Frame = 2
Query:  290 LDHFSFADL--PTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGEL 862
            LDHF+F      TF QR+L++   WV     GPIF Y GNEGD+  FA NS FV ++A   GA+LVF EHRYYG+S+P+G+     Q   T   LT EQALADFA  +  L+++L A+ +P + FGGSYGGML+A++R+KYPH+  GALA+SAP+L    +     F+  V++DF+ +S  C   ++E++ ++
Sbjct:   40 LDHFNFERFGNKTFPQRFLVSDRFWVRGE--GPIFFYTGNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQST--QRGHT-ELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADFEGQSPKCTQGVREAFRQI 227          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: DPP2_MOUSE (Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.076e-41
Identity = 88/195 (45.13%), Postives = 126/195 (64.62%), Query Frame = 2
Query:  290 LDHFSFADL--PTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG--STEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGEL 862
            +DHF+F      TF QR+L++   W      GPIF Y GNEGDI  FA NSGF+ ++A +  A+LVF EHRYYG+S+P+G  ST+  Y        LT EQALADFAV +  L+Q+L    +P + FGGSYGGML+A+MR+KYPH+  GALA+SAP++    +     F+  V++DF  +S  C   +++++ ++
Sbjct:   50 MDHFNFESFGNKTFGQRFLVSDKFWKMGE--GPIFFYTGNEGDIWSFANNSGFMVELAAQQEALLVFAEHRYYGKSLPFGVQSTQRGYTQL-----LTVEQALADFAVLLQALRQDLGVHDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVVAVAGLGDSYQFFRDVTADFYGQSPKCAQAVRDAFQQI 237          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: PCP5_CAEEL (Prolyl carboxy peptidase like protein 5 OS=Caenorhabditis elegans GN=pcp-5 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.815e-39
Identity = 84/202 (41.58%), Postives = 123/202 (60.89%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL--SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVRQKENG 889
            +D F+F +   F  RY +N DH+      GPI  Y GNEG +E FA N+GF+WD+AP   A +VF EHR+YG+S P+ +   +Y +   L YL+++QALADFA+ +   K      A+ S V+ FGGSYGGML+AW R+KYPHI  GA+A+SAP+  F D   PE  Y+ + +    ++      I++ W  L  + + ++G
Sbjct:   50 IDPFAFTNDLEFDLRYFLNIDHY---ETGGPILFYTGNEGSLEAFAENTGFMWDLAPELKAAVVFVEHRFYGKSQPFKNE--SYTDIRHLGYLSSQQALADFALSVQFFKNEKIKGAQKSAVIAFGGSYGGMLSAWFRIKYPHIVDGAIAASAPVFWFTDSNIPEDVYDFIVTRAFLDAGCNRKAIEKGWIALDELAKSDSG 246          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: PCP1_CAEEL (Putative serine protease pcp-1 OS=Caenorhabditis elegans GN=pcp-1 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.701e-35
Identity = 81/207 (39.13%), Postives = 120/207 (57.97%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS------AEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFE-DIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVRQKENG 889
            LDHF++ D  TF  R + N   +      GPIF Y GNEG +E F   +G ++D+AP F A ++F EHR+YG++ P+G+   +Y +   + YLT+EQALAD+A  +T LK++ +        A+ V+ FGGSYGGML+AW R KYPHI  GA A SAP++      V P  F +I S  +     + F  +  +W   +++   + G
Sbjct:   51 LDHFTWGDTRTFDMRVMWNNTFYKPG---GPIFFYTGNEGGLESFVTATGMMFDLAPMFNASIIFAEHRFYGQTQPFGNQ--SYASLANVGYLTSEQALADYAELLTELKRDNNQFKMTFPAATQVISFGGSYGGMLSAWFRQKYPHIVKGAWAGSAPLIYMNGGGVDPGAFDHITSRTYIDNGCNRF-ILANAWNATLNLSSTDAG 251          
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: TSSP_HUMAN (Thymus-specific serine protease OS=Homo sapiens GN=PRSS16 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.662e-26
Identity = 68/155 (43.87%), Postives = 97/155 (62.58%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQ--NLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 748
            LD F+ +D  +F QRY +N  HWVG +  GPIFL+ G EG +   +V  G    +AP +GA+++  EHR+YG S+P G  E+A      L +L++  ALAD       L +  N+S+ +SP + FGGSY G LAAW RLK+PH+   ++ASSAP+
Sbjct:   66 LDPFNVSDRRSFLQRYWVNDQHWVGQD--GPIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQ-----LRFLSSRLALADVVSARLALSRLFNISS-SSPWICFGGSYAGSLAAWARLKFPHLIFASVASSAPV 212          
The following BLAST results are available for this feature:
BLAST of FC877879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PCP_MOUSE7.161e-5449.76Lysosomal Pro-X carboxypeptidase OS=Mus musculus G... [more]
PCP_PONAB9.353e-5450.50Lysosomal Pro-X carboxypeptidase OS=Pongo abelii G... [more]
PCP_HUMAN1.595e-5350.50Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
PCP_BOVIN6.703e-5250.99Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=... [more]
DPP2_RAT2.823e-4245.13Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp... [more]
DPP2_HUMAN4.815e-4246.11Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=... [more]
DPP2_MOUSE4.076e-4145.13Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=... [more]
PCP5_CAEEL3.815e-3941.58Prolyl carboxy peptidase like protein 5 OS=Caenorh... [more]
PCP1_CAEEL5.701e-3539.13Putative serine protease pcp-1 OS=Caenorhabditis e... [more]
TSSP_HUMAN1.662e-2643.87Thymus-specific serine protease OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AD02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA100AD02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877879 ID=FC877879; Name=FC877879; organism=Citrus clementina; type=EST; length=903bp
CGACATCTAACAGTTTAACAGACGAGCTATCTTTCTCAGTCCTCACTGTC
GCTGAACGCCGAAATTGACAATGCCAAAAACCAGACAGCAAAAGCAAAAC
TCACTGTATCTCTCTCCTGTTATCACCATCGTCATCATCTCCATTTTATC
TCCGTTATCACTTGCATCACAGCCGTCCAAATTCAGGCGGGCCCCACGCT
TCGTCGGAAAATTGTCACACCTAACTGAACCCCCCCAACGACAACAACAG
CAGCAGTACCGGTATGAGACCCGATATTTCGAGCAACGACTCGACCACTT
CAGCTTTGCTGATCTCCCGACATTCTCTCAAAGGTACCTGATCAACACCG
ATCACTGGGTGGGCCCCAACCGTCTGGGTCCCATCTTCCTCTACTGTGGC
AACGAAGGCGACATCGAGTGGTTCGCCGTTAATTCCGGCTTTGTGTGGGA
CATCGCTCCCAGGTTTGGCGCCATGCTTGTCTTTCCCGAGCATCGGTACT
ATGGTGAGTCGATGCCATATGGAAGCACAGAAGTGGCATATCAAAATGCT
ACTACATTATCATATTTGACGGCCGAGCAAGCTCTTGCTGATTTTGCTGT
CTTTATTACTAACCTGAAGCAGAATTTATCGGCTGAAGCTTCTCCCGTAG
TGTTATTTGGTGGATCATATGGTGGAATGTTAGCTGCATGGATGAGGTTA
AAGTATCCTCACATTGCAATTGGTGCGCTTGCTTCATCAGCGCCAATTCT
TCAATTTGAAGATATTGTCCCACCAGAAACATTTTACAACATTGTATCCA
GTGATTTCAAGCGTGAAAGTGCCAGCTGCTTCAACACTATAAAGGAGTCC
TGGGGTGAGTTGGTATCAGTGAGGCAAAAAGAGAATGGACTTCTTGAACT
GAC
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