FC877921

Overview
NameFC877921
Unique NameFC877921
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length891
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC877921_ssr489 microsatellite FC877921_ssr489:489..500. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig8223 contig Ccv1_Contig8223:47..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: GSOX5_ARATH (Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana GN=FMOGS-OX5 PE=2 SV=2)

HSP 1 Score: 332.028 bits (850), Expect = 2.738e-90
Identity = 156/259 (60.23%), Postives = 200/259 (77.22%), Query Frame = 1
Query:  118 ELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEG-SVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEKQPGYDNMWLHSMVERASEDGTVVFRNGRVVSADVIMHCTG 891
            EL RE HTVVV+E+  +VGG W+YT  +E DPL +DPNR  VHSS+Y SLR NLPRE MG++ +PFV R  +  S D RRYP H EVL YL++FAREF + ++VR  TEV+     E  KW+V+S+  D + ++E FDAVVVCNGH++ PR+A VPGIDSWPGKQ+HSHNYR+P+ F+DQVV++IG++ASG DI RD+ G AKEVHIASRS   +T+ K PG +N+WLHSM+E   EDGT+VF+NG+VV AD I+HCTG
Sbjct:   28 ELRRENHTVVVFERDSKVGGLWVYTPNSEPDPLSLDPNRTIVHSSVYDSLRTNLPRECMGYRDFPFVPRPEDDESRDSRRYPSHREVLAYLEDFAREFKLVEMVRFKTEVVLVE-PEDKKWRVQSKNSDGISKDEIFDAVVVCNGHYTEPRVAHVPGIDSWPGKQIHSHNYRVPDQFKDQVVVVIGNFASGADISRDITGVAKEVHIASRSNPSKTYSKLPGSNNLWLHSMIESVHEDGTIVFQNGKVVQADTIVHCTG 285          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: GSOX4_ARATH (Flavin-containing monooxygenase FMO GS-OX4 OS=Arabidopsis thaliana GN=FMOGS-OX4 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.406e-86
Identity = 149/259 (57.53%), Postives = 199/259 (76.83%), Query Frame = 1
Query:  118 ELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEKQP-GYDNMWLHSMVERASEDGTVVFRNGRVVSADVIMHCTG 891
            EL REGHTVVV ++ +QVGG W+YT ETESD LG+DP R  VHSS+YKSLR NLPRE MG++ +PFV R  + S D RRYP H EVL YLQ+FA EF +++++R  TEVL    V + KW+V+S+       +E +DAVV+C GHF+ P +AQ+PGI+SWPG+Q HSH+YR+P+PF+D+VV++IG++ASG DI RD++  AKEVHIASR+    T EK+P   +N+W+HS ++ A EDGT+VF+NG+VV AD I+HCTG
Sbjct:   28 ELRREGHTVVVLDREKQVGGLWVYTPETESDELGLDPTRPIVHSSVYKSLRTNLPRECMGYKDFPFVPRGDDPSRDSRRYPSHREVLAYLQDFATEFNIEEMIRFETEVLRVEPV-NGKWRVQSKTGGGFSNDEIYDAVVMCCGHFAEPNIAQIPGIESWPGRQTHSHSYRVPDPFKDEVVVVIGNFASGADISRDISKVAKEVHIASRASKSNTFEKRPVPNNNLWMHSEIDTAHEDGTIVFKNGKVVHADTIVHCTG 285          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: GSOX3_ARATH (Flavin-containing monooxygenase FMO GS-OX3 OS=Arabidopsis thaliana GN=FMOGS-OX3 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 1.008e-84
Identity = 139/259 (53.67%), Postives = 200/259 (77.22%), Query Frame = 1
Query:  118 ELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEK-QPGYDNMWLHSMVERASEDGTVVFRNGRVVSADVIMHCTG 891
            EL REGH+VVV+E+ +QVGG W+YT +++SDPL +DP R  VHSS+Y+SLR N+PRE MG + +PF+ R  + S D RRYP H EVL Y+Q+FAREF +++++R  TEV+    V++  W+V+S+     +E+E +DAVVVCNGH++ P +A +PGI SWPGKQ+HSHNYR+P+PF+++VV++IG++ASG DI RD+A  AKEVHIASR+    T+EK     +N+W+HS ++   EDG++VF+NG+V+ AD I++CTG
Sbjct:   28 ELRREGHSVVVFEREKQVGGLWVYTPKSDSDPLSLDPTRSKVHSSIYESLRTNVPRESMGVRDFPFLPRFDDESRDARRYPNHREVLAYIQDFAREFKIEEMIRFETEVVRVEPVDNGNWRVQSKNSGGFLEDEIYDAVVVCNGHYTEPNIAHIPGIKSWPGKQIHSHNYRVPDPFENEVVVVIGNFASGADISRDIAKVAKEVHIASRAREPHTYEKISVPQNNLWMHSEIDTTHEDGSIVFKNGKVIFADSIVYCTG 286          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: GSOX2_ARATH (Flavin-containing monooxygenase FMO GS-OX2 OS=Arabidopsis thaliana GN=FMOGS-OX2 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.455e-83
Identity = 150/280 (53.57%), Postives = 201/280 (71.79%), Query Frame = 1
Query:   55 PLMFRHXXXXXXXXXXXXXXHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEKQP-GYDNMWLHSMVERASEDGTVVFRNGRVVSADVIMHCTG 891
            P+  +H               EL REGHTVVV E+ ++VGG WIY+ + ESDPL +DP R  VHSS+Y+SLR NLPRE MGF  +PFV R  + S D RRYP H EVL YLQ+FAREF ++++VR   EV+    V + KW+V S+    V  +E FDAVVVC+GH++ P +A +PGI SWPGKQ+HSHNYR+P PF+++VV++IG++ASG DI RD+A  AKEVHIASR+   +T+EK P   +N+W+HS ++ A EDG++VF+NG+VV AD I++CTG
Sbjct:    7 PISSQHVVVIGAGAAGLVAARELSREGHTVVVLEREKEVGGLWIYSPKAESDPLSLDPTRSIVHSSVYESLRTNLPRECMGFTDFPFVPRFDDESRDSRRYPSHMEVLAYLQDFAREFNLEEMVRFEIEVVRVEPV-NGKWRVWSKTSGGVSHDEIFDAVVVCSGHYTEPNVAHIPGIKSWPGKQIHSHNYRVPGPFENEVVVVIGNFASGADISRDIAKVAKEVHIASRASEFDTYEKLPVPRNNLWIHSEIDTAYEDGSIVFKNGKVVYADSIVYCTG 285          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: GSOX1_ARATH (Flavin-containing monooxygenase FMO GS-OX1 OS=Arabidopsis thaliana GN=FMOGS-OX1 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.482e-83
Identity = 145/259 (55.98%), Postives = 196/259 (75.68%), Query Frame = 1
Query:  118 ELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEKQP-GYDNMWLHSMVERASEDGTVVFRNGRVVSADVIMHCTG 891
            EL REGHTVVV+++ +QVGG W Y+S+ +SDPL +D  R  VH+S+Y+SLR NLPRE MGF  +PFV R ++ S D RRYP H EVL YLQ+FAREF ++++VR  TEV+    V + KW V+S+        E FDAVVVC+GHF+ P +A +PGI SWPGKQ+HSHNYR+P PF ++VV++IG+YASG DI RD+A  AKEVHIASR+   +T++K P   +N+W+HS ++ A +DG+++F+NG+VV AD I+HCTG
Sbjct:   28 ELRREGHTVVVFDREKQVGGLWNYSSKADSDPLSLDTTRTIVHTSIYESLRTNLPRECMGFTDFPFVPRIHDISRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVCVEPV-NGKWSVRSKNSVGFAAHEIFDAVVVCSGHFTEPNVAHIPGIKSWPGKQIHSHNYRVPGPFNNEVVVVIGNYASGADISRDIAKVAKEVHIASRASESDTYQKLPVPQNNLWVHSEIDFAHQDGSILFKNGKVVYADTIVHCTG 285          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: FMO5_RAT (Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus GN=Fmo5 PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 8.692e-20
Identity = 63/213 (29.58%), Postives = 109/213 (51.17%), Query Frame = 1
Query:  124 LREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNAR----LVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLA--QVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 744
            L EG   V +E+ + +GG W Y    E              +S+YKS+ +N  +E+M F  YP +  +Y        +  + +VL Y + +A+EFG+ + ++  T V + +       S +W+V + + +   + + FD V+VC GH + P L     PGI+ + GK  HS  Y+ P  F  + VI+IG   SG D+  +++  AK+V +++R
Sbjct:   23 LEEGLEPVCFERSDDIGGLWRYQENPEKG-----------RASIYKSVIINTSKEMMCFSDYP-IPDHYPN------FMHNSQVLEYFRMYAKEFGLLKYIQFKTTVCSVKKQPDFSTSGQWQVVT-EHEGKQQVDVFDGVLVCTGHHTDPHLPLDSFPGIEKFKGKYFHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTR 216          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: FMO5_CAVPO (Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Cavia porcellus GN=FMO5 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.634e-19
Identity = 61/213 (28.64%), Postives = 108/213 (50.70%), Query Frame = 1
Query:  124 LREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNAR----LVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLA--QVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 744
            L EG   V +E+   +GG W +    E              +S+YKS+ +N  +E+M F  YP +  +Y        +  +  VL Y + +A+EFG+ + ++  T V N +       S +W+V + + +   + + FDAV+VC GH +   L     PGI+ + G+  HS +Y+ P  F  + V++IG   SG D+  +++  AK+V +++R
Sbjct:   23 LEEGLEPVCFERSADIGGLWRFQENPEEG-----------RASIYKSVIINTSKEMMCFSDYP-IPDHYPN------FMHNSHVLEYFRMYAKEFGLLKYIQFKTTVCNVKKRPDFSTSGQWEVVT-EHEGKTKVDVFDAVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEAFTGKRVVIIGIGNSGGDLAVEISHTAKQVFLSTR 216          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: FMO6_HUMAN (Putative dimethylaniline monooxygenase [N-oxide-forming] 6 OS=Homo sapiens GN=FMO6 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.358e-19
Identity = 62/216 (28.70%), Postives = 108/216 (50.00%), Query Frame = 1
Query:  124 LREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES----NKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLA--QVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 753
            L EG     +E+ + VGG W ++  TE              +S+Y+S+  N  +E+M F  +P+         D   Y  H ++  Y++ +A++  + + ++  T V   +   S     +W V + +KD   E   FDAV++C+GH   P L     PG+D + G  +HS +Y+ P  F+ + V++IG   SG DI  +L+  A +V I++RS +
Sbjct:   22 LEEGLEPTCFERSDDVGGLWKFSDHTEEG-----------RASIYQSVFTNSSKEMMCFPDFPYPD-------DYPNYIHHSKLQEYIKTYAQKKDLLRYIQFETLVSGIKKCPSFLVTGQWVVVT-EKDGKQESTIFDAVMICSGHHVYPNLPTDSFPGLDQFRGNYLHSRDYKNPEAFKGKRVLVIGLGNSGSDIAVELSRLATQVIISTRSAS 218          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: FMO3_MACMU (Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Macaca mulatta GN=FMO3 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 9.610e-19
Identity = 64/214 (29.91%), Postives = 108/214 (50.47%), Query Frame = 1
Query:  124 LREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEV--LNAR--LVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLAQ--VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 747
            L EG     +EK   +GG W ++   E              +S+YKS+  N  +E+M F  +P+         D   +  + ++  YL  FA+E  + + ++  T V  +N R     + +W V + ++D   E   FDAV+VC+GH   P L +   PG++ + GK  HS +Y+ P  F+ + V+++G   SG DI  +L+  A++V I+SRS
Sbjct:   22 LEEGLEPTCFEKSNDIGGLWKFSDHAEEG-----------RASIYKSVFTNSSKEMMCFPDFPYPD-------DFPNFMHNSKIQEYLTAFAKEKSLLKYIQFKTFVSSVNKRPDFATTGQWDVTT-ERDGKRESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVFKGKRVLVVGLGNSGCDIATELSHTAEQVVISSRS 216          
BLAST of FC877921 vs. ExPASy Swiss-Prot
Match: FMO3_PANTR (Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Pan troglodytes GN=FMO3 PE=3 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.639e-18
Identity = 64/214 (29.91%), Postives = 107/214 (50.00%), Query Frame = 1
Query:  124 LREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEV--LNAR--LVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLAQ--VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 747
            L EG     +EK   +GG W ++   E              +S+YKS+  N  +E+M F  +PF         D   +  + ++  Y+  FA+E  + + ++  T V  +N R     + +W V + ++D   E   FDAV+VC+GH   P L +   PG++ + GK  HS +Y+ P  F  + V+++G   SG DI  +L+  A++V I+SRS
Sbjct:   22 LEEGLEPTCFEKSNDIGGLWKFSDHAEEG-----------RASIYKSVFSNSSKEMMCFPDFPFPD-------DFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKRPDFATTGQWDVTT-ERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRS 216          
The following BLAST results are available for this feature:
BLAST of FC877921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
GSOX5_ARATH2.738e-9060.23Flavin-containing monooxygenase FMO GS-OX5 OS=Arab... [more]
GSOX4_ARATH1.406e-8657.53Flavin-containing monooxygenase FMO GS-OX4 OS=Arab... [more]
GSOX3_ARATH1.008e-8453.67Flavin-containing monooxygenase FMO GS-OX3 OS=Arab... [more]
GSOX2_ARATH1.455e-8353.57Flavin-containing monooxygenase FMO GS-OX2 OS=Arab... [more]
GSOX1_ARATH2.482e-8355.98Flavin-containing monooxygenase FMO GS-OX1 OS=Arab... [more]
FMO5_RAT8.692e-2029.58Dimethylaniline monooxygenase [N-oxide-forming] 5 ... [more]
FMO5_CAVPO5.634e-1928.64Dimethylaniline monooxygenase [N-oxide-forming] 5 ... [more]
FMO6_HUMAN7.358e-1928.70Putative dimethylaniline monooxygenase [N-oxide-fo... [more]
FMO3_MACMU9.610e-1929.91Dimethylaniline monooxygenase [N-oxide-forming] 3 ... [more]
FMO3_PANTR1.639e-1829.91Dimethylaniline monooxygenase [N-oxide-forming] 3 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22DG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22DG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877921 ID=FC877921; Name=FC877921; organism=Citrus clementina; type=EST; length=891bp
AAAGGATGTAATGGGTTGGTAGAGCGAAAAATTTTAATTAAAGAAACGGC
ACCTCCACTTATGTTTCGCCATGTGGCAGTGATCGGCGCCGGCGCCGCTG
GACTGGTGGTGGGTCATGAGTTGCTGAGGGAAGGCCACACGGTGGTGGTT
TACGAGAAAGGAGAGCAAGTGGGTGGCTCTTGGATTTACACTTCGGAGAC
TGAGTCAGACCCGCTTGGTGTCGACCCAAATCGTTACCCGGTTCATTCGA
GCCTCTACAAGTCTCTCAGGGTCAATCTTCCCAGGGAGTTGATGGGATTT
CAAGCTTACCCGTTTGTGGCCCGTAATTATGAAGGGTCCGTTGACCTGAG
AAGGTATCCGGGTCATGAGGAGGTGTTGCGTTATTTACAAAATTTTGCCA
GAGAGTTTGGTGTCGATCAAGTGGTGAGGCTTCATACTGAGGTGTTGAAT
GCACGTTTGGTTGAGAGCAACAAATGGAAAGTTAAGTCAAGAAAGAAAGA
TGATGTTGTTGAAGAGGAAACTTTTGATGCTGTGGTCGTTTGCAATGGGC
ATTTTTCAGTGCCTCGTCTTGCTCAAGTTCCTGGCATTGATTCATGGCCA
GGGAAGCAAATGCATTCACATAATTATCGGATTCCCAATCCATTCCAAGA
TCAAGTAGTGATTCTGATAGGGCATTACGCTAGTGGATTGGATATAAAAA
GGGACTTAGCCGGATTTGCAAAAGAAGTTCACATTGCATCTCGATCGGTT
GCAGATGAAACACATGAAAAACAGCCCGGATATGATAATATGTGGCTTCA
TTCTATGGTAGAAAGAGCCAGTGAAGATGGTACCGTGGTTTTCCGAAATG
GAAGAGTTGTCTCTGCAGATGTCATTATGCATTGCACTGGG
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