FC877929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877929 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 6.531e-69 Identity = 140/276 (50.72%), Postives = 175/276 (63.41%), Query Frame = 2 Query: 38 ESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGADFQDFCWSSVEDYSSGISDIELVS 865 ES +WT+LP ++TS IL ++GAI++L +AQ+VC SW R+C DP MWR IDMHNLGDL DMD++LE MCRHAVDRS G L+ I I YFGT +LL YIA + C I+D GF EA+ P E+L VG C +++ KLN P+ E DDDA AIAE M LRHLQL GN L++ GL AILD C +LE LDLR+CFNVNLVG L K C E ++ +RHPNDS HD + G SS ++ SDI+L+S Sbjct: 15 ESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELELSYCSFSV-ESLRVVGQCCLNMKTLKLNKH----PQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRHPNDSIHDIDIG--------SSEDEDPYDFSDIDLMS 277
BLAST of FC877929 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 8.827e-66 Identity = 129/255 (50.59%), Postives = 165/255 (64.71%), Query Frame = 2 Query: 47 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKI-----ECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGAD 796 +W +LP+ +TS+IL ++GAI++L +AQ+VC W R+C DP MWR ID+ N D +DLE MCRHAVDRS+G L+ I I Y+GT++L+ YIA V C+ I+D+G +A+ P E+L +G CP L++ KLN R P+I DD+AKAIAE+M LRHLQL GN LTN GL AILDGCPHLE LDLRQCFN+NLVG L K C ERI+DLR PNDS D + G+D Sbjct: 180 NWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLN----RAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCPNDSDDDSDDGSD 430 HSP 2 Score: 109.768 bits (273), Expect = 2.432e-23 Identity = 59/105 (56.19%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 551 DDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGADFQDFCWSSVEDYSSGISDIELVS 865 DD+ AIAE M LRHL+LFGN LTN+ L+AILD C HL LDLR+CFN+NL+G L K C+ERIRDLR P+DST D F A S + YS+G D + S Sbjct: 19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRDLRRPDDSTADSPFDA--------SSDIYSAGEDDYDFYS 115
BLAST of FC877929 vs. ExPASy Swiss-Prot
Match: FB221_ARATH (Putative F-box protein At4g05480 OS=Arabidopsis thaliana GN=At4g05480 PE=4 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 6.775e-58 Identity = 123/286 (43.01%), Postives = 165/286 (57.69%), Query Frame = 2 Query: 32 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRC----------PKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLES-LDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGADFQDFCWSSVEDYSSGISDIE 856 ++E +W LP ++T++IL ++ D+L +A+++C +W RIC DP MWR I NL D + D E MCRH VD S G LL INIE+F +D LL YI ++++G I+ P + L+A+G CP L++ KLN+ G P +ECDDDA AIAE+M LRHLQL GN LTN GL AILDGCPHLE LD+R+CFN+NLVG L K C +RI++LR P+DST DY FG DF + + + G + E Sbjct: 34 DEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRDCLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRRPHDSTADYPFGQASPDFAMNLEDKVTFGRQESE 315
BLAST of FC877929 vs. ExPASy Swiss-Prot
Match: FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana GN=FBL22 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 7.255e-52 Identity = 119/290 (41.03%), Postives = 159/290 (54.83%), Query Frame = 2 Query: 8 SRMSTGTAEQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEY--FGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEF-----GADFQDFCWSSVEDYSSGISDIE 856 S++ E++ +W +LP D+ S+IL ++ +++L +A++VC SW R+ DP++WR IDM NL L+ + + +E CRH VD S G LL NI+ F T LL Y+A V I+ G EAI P +E + +G CP L++ KL G E D+DA AIA+ M GL HLQL N LTN+GL AILDGCPHLE LDLRQCFN+NL G L + C ERI+D R PND DY + +D E+YS G D E Sbjct: 13 SQLPVMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCPNDVLDDYNYVIFSDNGSIEDEKGEEEENYSYGSDDTE 298
BLAST of FC877929 vs. ExPASy Swiss-Prot
Match: FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana GN=FBL21 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.334e-50 Identity = 114/267 (42.70%), Postives = 147/267 (55.06%), Query Frame = 2 Query: 35 QESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINI-EYFGTDELLQYIAXXXXXXXXXXXVSCY-NISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPK--------------IECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEF 787 +E +W LP ++T++IL ++ D+L +AQ+VC W RIC DP MWR I N D + D MCRH VD S G LL IN+ E+F +D LL YI C+ ++ G AI P + L+A+G CP L++ KLN+ G P +ECDDDA AIAE+M L HLQL N LTN GL AILDGCPHLE LD+R+CF ++LVG L K C E I++LR P DST DY + Sbjct: 41 KERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGM--CFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELRRPGDSTADYPY 301
BLAST of FC877929 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.731e-45 Identity = 102/231 (44.16%), Postives = 134/231 (58.01%), Query Frame = 2 Query: 47 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMH---NLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEA-LEAVGSLCPLLRSFKLNNRGH-RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGK 724 +W +LP ++TS+IL ++GAI++L +AQRVC SW R+C DP MWR ID+ NL + ++ + +E +C AVD S G LL INI+Y L YIA V C + +G EA P +E L+ VG CP LR+ KLN G +C CD A AIAE M GLRHLQLF N L+ GL AIL+GCPHL++L L QC N+N+VG + K Sbjct: 20 NWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKC----CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
BLAST of FC877929 vs. ExPASy Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.378e-16 Identity = 67/248 (27.02%), Postives = 107/248 (43.15%), Query Frame = 2 Query: 32 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGD-------LW--DMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCE-AIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLN----NRGH----------RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVN 703 E++ DW L ++ I+S++ ++ T V SWL +C DP +W D+ D LW + + ++ M R VD S G L I + + +D L Y A S N++D + A + + L +G CP LR K N + H CP+ + D +A AI ++M L HL++ + L+ GL +I +GCP LE LDL C +++ Sbjct: 2 EEDGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQ-DGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCVHLS 247 The following BLAST results are available for this feature:
BLAST of FC877929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877929 ID=FC877929; Name=FC877929; organism=Citrus clementina; type=EST; length=952bpback to top |