FC877949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3_DICDI (Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum GN=gnl3 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.244e-45 Identity = 108/243 (44.44%), Postives = 141/243 (58.02%), Query Frame = 2 Query: 218 KVEKDPGIPNDWPFKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLEDDDVSMLADAANG----------KEENFGEGTSTASGKNRDNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKS--SKTAKPSNILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 K KDPGIPN WPFKE D SM ADA K++ +G GK D+S + FY+E+ KVIE DVIL+VLDARDP+G RC+++EKM+++ +K +VL+LNKIDLVPRE+V WLKYLR P +AFKCSTQ+Q+ NLG + +++L +++ LGAE L++LLKNYS S IK S+TVG+IG PNVGKS Sbjct: 41 KSRKDPGIPNLWPFKEDMLNKIEQQKQKASEEKKNKKEKRRLEQMAEA----RRDIASMAADAKRRESEFQERQQLKQQQKQQGKFEKEGK--DSSLKQFYREVKKVIEAGDVILQVLDARDPMGCRCLEIEKMILERYTNKKIVLILNKIDLVPRENVLMWLKYLRNFYPTLAFKCSTQQQKRNLGQQGGIQPELASNDMLNSTESLGAEQLLQLLKNYSRSLNIKTSVTVGIIGYPNVGKS 277
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3L_HUMAN (Guanine nucleotide-binding protein-like 3-like protein OS=Homo sapiens GN=GNL3L PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.333e-39 Identity = 86/145 (59.31%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 479 RAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPS-NILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 +A+YKE KV+E SDVILEVLDARDPLG RC ME+ V++A +K LVL+LNKIDLVP+E VEKWL YLR ELP VAFK STQ Q NL S + S ++L++ C GAE L+++L NY E++ I VGV+GLPNVGKS Sbjct: 122 KAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVEKWLDYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKS 266
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3L_BOVIN (Guanine nucleotide-binding protein-like 3-like protein OS=Bos taurus GN=GNL3L PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.740e-39 Identity = 85/145 (58.62%), Postives = 107/145 (73.79%), Query Frame = 2 Query: 479 RAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPS-NILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 +A+YKE KV+E SDVILEVLD+RDPLG RC ME+ V++A +K LVL+LNKIDLVP+E VEKWL+YLR ELP VAFK STQ Q NL S + S ++L++ C GAE L+++L NY E++ I VGV+GLPNVGKS Sbjct: 115 KAYYKEFHKVVEYSDVILEVLDSRDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEVVEKWLEYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKS 259
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3_CAEEL (Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis elegans GN=nst-1 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.613e-39 Identity = 97/236 (41.10%), Postives = 137/236 (58.05%), Query Frame = 2 Query: 218 KVEKDPGIPNDWPFKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLEDDDVSMLADAANGKEENFGEGTSTASGKNR-----DNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 K EK +PN PFKE+ L + SM+A A+ E F + ++A+ + D + +A+ E+ K +E++DVI++VLDARDPLG+R +E V+K G K LVLLLNKIDLVPRE+V+KWL+YLR + P +AFK STQEQ++N+G +S N +TS C+GA+ ++K+L NY + +IK SI VGV+G PNVGKS Sbjct: 44 KKEKTISVPNSCPFKEEILVQAEQEREKIKVRQEAAKEAAKIHRIEKRKNNLPANFESMVAKASKQGTE-FDKKVASAAEHEKFNTLDDKTIKAYASEVRKTVEIADVIIQVLDARDPLGSRSKSVEDQVLKGG--KRLVLLLNKIDLVPRENVQKWLEYLRGQFPTIAFKASTQEQKSNIGRFNSAIL---NNTETSKCVGADIVMKILANYCRNKDIKTSIRVGVVGFPNVGKS 273
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3_DROME (Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila melanogaster GN=ns1 PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 3.629e-37 Identity = 83/180 (46.11%), Postives = 112/180 (62.22%), Query Frame = 2 Query: 380 DDVSMLADAANGKEENFGEGTSTASGKN---RDNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 +D M + EN + KN ++ S + ++KE KVIE +DV+LEV+DARDPLGTRC ++E+ V A +K LVL+LNK DLVPRE++ W+KY R P AFK STQ+Q LG + + K +Q S C+GAE L+ +L NY + IK SI VGV+G+PNVGKS Sbjct: 102 EDADMRSTVHGIMHENDAQDQDEKKYKNAVTKEQSLKQYFKEFRKVIENADVVLEVVDARDPLGTRCNEVERAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRRSGPVTAFKASTQDQANRLGRRKLREMKTEKAMQGSVCIGAELLMSMLGNYCRNKGIKTSIRVGVVGIPNVGKS 281
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3L_MOUSE (Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus GN=Gnl3l PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.084e-37 Identity = 81/146 (55.48%), Postives = 102/146 (69.86%), Query Frame = 2 Query: 479 RAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRAN--LGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 +A+YKE KV+E SDVILEVLDARDPLG RC ME+ V++A +K LVL+LNKIDLVP+E VEKWL+YL ELP VAFK STQ + K ++L++ C GAE L+++L NY E++ I VGV+GLPNVGKS Sbjct: 115 KAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEIVEKWLEYLLNELPTVAFKASTQHHQVKNLTRCKVPVDQASESLLKSRACFGAENLMRVLGNYCRLGEVRGHIRVGVVGLPNVGKS 260
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3_HUMAN (Guanine nucleotide-binding protein-like 3 OS=Homo sapiens GN=GNL3 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 7.082e-33 Identity = 91/235 (38.72%), Postives = 123/235 (52.34%), Query Frame = 2 Query: 209 GKRKVEKDPGIPNDWPFKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLEDDDVSMLADAANGKEENFGE-GTSTASGKNRDNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 G +K KDPG+PN PFKE L + D+ E+ FG T + + NS + + +EL KVIE SDV+LEVLDARDPLG RC +E+ ++++G K LVL+LNK DLVP+E++E WL YL++ELP V F+ ST+ + K K K + ++ C G E L KLL + + K+I VGVIG PNVGKS Sbjct: 40 GHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQKELEKKRK-LETNPDIK--PSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSG-QKKLVLILNKSDLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQET--CSKAIRVGVIGFPNVGKS 268
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3_RAT (Guanine nucleotide-binding protein-like 3 OS=Rattus norvegicus GN=Gnl3 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.591e-32 Identity = 89/234 (38.03%), Postives = 117/234 (50.00%), Query Frame = 2 Query: 209 GKRKVEKDPGIPNDWPFKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLEDDDVSMLADAANGKEENFGEGTSTASGKNRDNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 G +K +KDPG+PN PFKE + DD + +E E + + N + +EL KVIE SD++LEVLDARDPLG RC +E+ V+++G K LVL+LNK DLVP+E++E WL YL +ELP V FK ST + +K K P Q+ C G E L KLL + S K + VGV+G PNVGKS Sbjct: 40 GHKKPKKDPGVPNSAPFKEALLREAELRKQQLEELKQQQKLDRQKEQERKRKLEISPDDEQSNVET----QEESDEPKIKKAKSGKQNPKKLHCQELKKVIEASDIVLEVLDARDPLGCRCPQVEEAVIQSGCKK-LVLVLNKSDLVPKENLENWLTYLNKELPTVVFKASTNLKNRKKTFKIKKKVVP---FQSKLCCGKEALWKLLGGFQQS--CGKGVQVGVVGFPNVGKS 263
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3_MOUSE (Guanine nucleotide-binding protein-like 3 OS=Mus musculus GN=Gnl3 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.131e-30 Identity = 91/235 (38.72%), Postives = 118/235 (50.21%), Query Frame = 2 Query: 209 GKRKVEKDPGIPNDWPFKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLEDDDVSMLADAANGKEENFGEGTSTASGKNRDNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQ-EQRANLGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 G +K KDPG+PN PFKE LE ++ +E + + +GK N + +EL KVIE SD++LEVLDARDPLG RC +E+ V+++G K L+L+LNK DLVP+E++E WL YL +ELP V FK ST + R K K Q+ C G E L KLL ++ S K I VGVIG PNVGKS Sbjct: 40 GHKKPRKDPGVPNSAPFKEALLREAELRKQQLEELKQQQKLDRQKEQERKRK--LEVSPGDEQSNVETREESDEPKRKKAKAGKQ--NPKKLHCQELKKVIEASDIVLEVLDARDPLGCRCPQIEEAVIQSG-SKKLILVLNKSDLVPKENLENWLNYLNKELPTVVFKASTNLKNRKTFKIKKKKVVP----FQSKICCGKEALWKLLGDFQQS--CGKDIQVGVIGFPNVGKS 263
BLAST of FC877949 vs. ExPASy Swiss-Prot
Match: GNL3_XENLA (Guanine nucleotide-binding protein-like 3 OS=Xenopus laevis GN=gnl3 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.929e-30 Identity = 75/167 (44.91%), Postives = 102/167 (61.08%), Query Frame = 2 Query: 410 NGKEENFGEGTSTASGKNRDNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSXSHEIKKSITVGVIGLPNVGKS 910 N E+ K D+ D +++ KV+E SDVI+EVLDARDPLG+RC E++V+K+ P+K L+LLLNK DLVPRE VEKWL+ L ELP V F+C Q Q + K K ++++ C G + L+K+L + SH ++I VGVIG NVGKS Sbjct: 98 NNSEKKEKRDKKRKETKTPDDPDVVLCRQVNKVLEQSDVIVEVLDARDPLGSRCSQAEEVVLKS-PNKRLLLLLNKSDLVPREMVEKWLQVLSAELPTVPFRCVAQIQDKSEKKKKKKVPVSADLVTDPKCPGGQVLLKILHSLCPSH--NEAIKVGVIGFANVGKS 261 The following BLAST results are available for this feature:
BLAST of FC877949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877949 ID=FC877949; Name=FC877949; organism=Citrus clementina; type=EST; length=910bpback to top |