FC877962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMOA_DICDI (ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22 Identity = 60/213 (28.17%), Postives = 98/213 (46.01%), Query Frame = 2 Query: 272 QEERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAAWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSGRSLHDIVMVKHC*IYCQFYIK*IGLLSFATALVILKRVVSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVL 910 Q R + + +R V F+ +H L LW+ TYP +L +S+QWK+MG+QG DP TDFR G L+NL++FA+ ++ F++++ Q ++ EYP A AG+ +TF L + T S S + + + F+ + AF+ +YC F ++D W + N TYM F ++ Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCTDFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQIDRKER-EYPTATAGIVLTFELYNSIFKMGTPNLNPYNSTTSNTTSNTT--STTNIDDLPFFPLFF---------------------SHPHAFEEVYCTTFQILDSTWDDMNGTYMHFQKIM 550
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMOC_DICDI (ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.179e-19 Identity = 61/223 (27.35%), Postives = 105/223 (47.09%), Query Frame = 2 Query: 260 LTPQQEERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAAWEYPFAVAGVNITFMLMQMLDLEATKPR-----TFVRSVFLQMLSGRSLHDIVMVKHC*IYCQFYIK*IGLLSFATALVILKRVVSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLK 913 +T +Q + ++ L + ++++ PDH+E L+ LW+ YP++E S WK+ G+Q DP+ DFRG G + L NL+ + + Q +L + +YPFAVAG+NI+ ++ ++ + + +F S ++ ML S H N+ AF+ LY + F ++D W++ NATYM F V+K Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSDDPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQDR------DYPFAVAGINISNLIFEVFQISEDSLQQPWYSSFWSSSYMAMLCSMSRH-------------------------------------NDHAFEELYFLIFNLLDHLWIQMNATYMMFPLVIK 535
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMOB_DICDI (ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.459e-17 Identity = 38/113 (33.63%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 287 RRLKHRMKVYFDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAAWEYPFAVAGVNITFMLMQMLD 625 + ++ + K+ +D + +H+ +L LW A PD +S +W +G+QG DP+TDFRG G + L+NL++F+ S + +L+ K YPFA+ G+NIT +++ ++D Sbjct: 108 KSIEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNLIYFSTQHSEDAREILKNSNSKCC---YPFAITGINITALVLNLID 217
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMD2_MOUSE (ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.081e-16 Identity = 45/141 (31.91%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 230 KGTYERICINLTPQQEERLRRLKHRM----KVYFDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAAWEYPFAVAGVNITFMLMQMLDLEATK 640 K T +IC+ Q ++L H + K +D++ H++ L LW+ P ++L IS QW ++G+QG DP TDFRG G + L NL++F++ +++ ++L + + Y +A+ G+N+T M +L EA K Sbjct: 87 KDTSFQICMRTCLLQITGYKQLYHDVENVRKKPYDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLG--YSYAIVGINLTEMAYSLLKSEALK 225
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMD2_HUMAN (ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.550e-16 Identity = 39/108 (36.11%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 317 FDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAAWEYPFAVAGVNITFMLMQMLDLEATK 640 +D+ H+E L LW P ++L+ IS QW E+G+QG DP TDFRG G + L NL++F++ +++ ++L + + Y +A+ G+N+T M +L EA K Sbjct: 120 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLG--YSYAIVGINLTEMAYSLLKSEALK 225
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMD1_PONAB (ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.126e-15 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = 2 Query: 317 FDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLL------RKQGGKRAAWE---------YPFAVAGVNITFMLMQMLDLEATK 640 +D+ P H+E L LW P+ L IS QW E+G+QG DP TDFRG G + L NL +FA+ +T+ Q++L + +A WE Y FA+ G+NIT + +L A K Sbjct: 127 YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSGALK 249
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMD2_BOVIN (ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.695e-15 Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 317 FDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAAWEYPFAVAGVNITFMLMQMLDLEATK 640 +D+ H++ L LW P ++L IS QW ++G+QG DP TDFRG G + L NL++F++ +++ ++L + + Y +A+ G+N+T M +L EA K Sbjct: 120 YDSDNLQHEKLLIKLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLG--YSYAIVGINLTEMAYSLLKSEALK 225
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMD1_BOVIN (ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.492e-14 Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 2 Query: 278 ERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLL------RKQGGKRAAWE---------YPFAVAGVNITFMLMQMLDLEATK 640 E+LRR +D+ P H+E L LW P+ L IS QW E+G+QG DP TDFRG G + L NL +FA+ + + Q++L + +A WE Y FA+ G+NIT + +L A K Sbjct: 120 EKLRRES------YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSGALK 249
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMD1_MOUSE (ELMO domain-containing protein 1 OS=Mus musculus GN=Elmod1 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14 Identity = 44/123 (35.77%), Postives = 63/123 (51.22%), Query Frame = 2 Query: 317 FDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAA------WE---------YPFAVAGVNITFMLMQMLDLEATK 640 +D+ P H+E L LW P+ L +S QW E+G+QG DP TDFRG G + L NL +FA+ +T Q++L + + WE Y FA+ G+NIT + +L A K Sbjct: 127 YDSDNPQHEEMLLKLWELLKPNTPLESRVSKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYFAERDATVAQQVLSDSVHPKCSKFSKIEWEKKKMDKAIGYSFAIVGINITDLAYNLLVSGALK 249
BLAST of FC877962 vs. ExPASy Swiss-Prot
Match: ELMD1_HUMAN (ELMO domain-containing protein 1 OS=Homo sapiens GN=ELMOD1 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14 Identity = 47/131 (35.88%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 317 FDASRPDHQEALRALWAATYPDRELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLL------------RKQGGK--RAAWE---------YPFAVAGVNITFMLMQMLDLEATK 640 +D+ P H+E L LW P+ L IS QW E+G+QG DP TDFRG G + L NL +FA+ +T+ Q++L +++ K +A WE Y FA+ G+NIT + +L A K Sbjct: 127 YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSGALK 257 The following BLAST results are available for this feature:
BLAST of FC877962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877962 ID=FC877962; Name=FC877962; organism=Citrus clementina; type=EST; length=913bpback to top |