FC877967

Overview
NameFC877967
Unique NameFC877967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length916
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10479 contig Ccv1_Contig10479:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877967 vs. ExPASy Swiss-Prot
Match: API5_DROME (Apoptosis inhibitor 5 homolog OS=Drosophila melanogaster GN=Aac11 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.060e-32
Identity = 79/209 (37.80%), Postives = 129/209 (61.72%), Query Frame = 2
Query:  269 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLIKKSLEDVTGAEFRMFMDFLKSLSL 892
            IE+LY+  E L+EA DK S++V +Y+ I++A K + K K+LA+Q I  FFK FPDL+  A+DA  DL E+++  +R QAI+ LP  C+   +   ++ D L QLL  ++  E   V+ +L+++++ D K+S+  LF+ I + DE +     RE+ L FI  K+  +   ++   +E+E +I + IKK+L+DVT  EF + M  L +  L
Sbjct:    4 IERLYKCYEILSEAGDKISEHVDEYKEILKAVKGTSKEKRLASQFIGNFFKHFPDLADTAIDAQFDLCEDDDTQIRRQAIKDLPKLCQGNADATIRVGDTLAQLLILDDPTELQQVNNSLLAIIKLDTKSSIAGLFQQISTGDETT-----RERCLKFIATKLLTMGPTVI--TKEIEDYIVEEIKKALQDVTADEFHLCMTILGATKL 205          
BLAST of FC877967 vs. ExPASy Swiss-Prot
Match: API5_CHICK (Apoptosis inhibitor 5 OS=Gallus gallus GN=API5 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.949e-30
Identity = 81/207 (39.13%), Postives = 123/207 (59.42%), Query Frame = 2
Query:  269 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLIKKSLEDVTGAEFRMFMDFLKSL 886
            +E+LY     L +A + +   KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T + L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L   +E+E  I    KK LEDVTG EF +FM  L  L
Sbjct:    4 VEELYRNYGILADATETAGQHKDAYQVILDGVKGGAKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGDNLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPEEVL--TKEVEEFILAESKKVLEDVTGEEFVLFMKILSGL 201          
BLAST of FC877967 vs. ExPASy Swiss-Prot
Match: API5_PONAB (Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 82/207 (39.61%), Postives = 122/207 (58.94%), Query Frame = 2
Query:  269 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLIKKSLEDVTGAEFRMFMDFLKSL 886
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L   +E+E  I    KK LEDVTG EF +FM  L  L
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVL--TKEVEELILTESKKVLEDVTGEEFVLFMKILSGL 201          
BLAST of FC877967 vs. ExPASy Swiss-Prot
Match: API5_MOUSE (Apoptosis inhibitor 5 OS=Mus musculus GN=Api5 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 82/207 (39.61%), Postives = 122/207 (58.94%), Query Frame = 2
Query:  269 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLIKKSLEDVTGAEFRMFMDFLKSL 886
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L   +E+E  I    KK LEDVTG EF +FM  L  L
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVL--TKEVEELILTESKKVLEDVTGEEFVLFMKILSGL 201          
BLAST of FC877967 vs. ExPASy Swiss-Prot
Match: API5_HUMAN (Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 82/207 (39.61%), Postives = 122/207 (58.94%), Query Frame = 2
Query:  269 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLIKKSLEDVTGAEFRMFMDFLKSL 886
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L   +E+E  I    KK LEDVTG EF +FM  L  L
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVL--TKEVEELILTESKKVLEDVTGEEFVLFMKILSGL 201          
BLAST of FC877967 vs. ExPASy Swiss-Prot
Match: API5A_XENLA (Apoptosis inhibitor 5-A OS=Xenopus laevis GN=api5-A PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 83/207 (40.10%), Postives = 122/207 (58.94%), Query Frame = 2
Query:  269 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLIKKSLEDVTGAEFRMFMDFLKSL 886
            +E+LY     L +AKD   Q+   Y+ II+  K   K K+LAAQ IP+FFK FPDLS  A++A LDL E+E++ +R QAI+ L  F   T E L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E L   +E++ +I    KK L DVTG EF +FM  L +L
Sbjct:    4 VEELYRSYGILADAKDDVGQHKSAYQVIIDGVKGGAKEKRLAAQFIPKFFKHFPDLSDSALNAQLDLCEDEDVSIRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLATKMKTLPEETL--TKEVDDYIFSESKKVLYDVTGEEFVLFMKILSAL 201          
BLAST of FC877967 vs. ExPASy Swiss-Prot
Match: API5B_XENLA (Apoptosis inhibitor 5-B OS=Xenopus laevis GN=api5-B PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29
Identity = 81/207 (39.13%), Postives = 123/207 (59.42%), Query Frame = 2
Query:  269 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLIKKSLEDVTGAEFRMFMDFLKSL 886
            +E+LY     L +AKD   Q+   Y+ I++  K   K K+LAAQ IP+FFK FPDLS  A++A LDL E+E++ +R QAI+ L  F   T E L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  ++L   +E++ +I    KK L DVTG EF +FM  L +L
Sbjct:    4 VEELYRNYGILADAKDDVGQHKSAYQVILDGVKGGPKEKRLAAQFIPKFFKHFPDLSDAALNAQLDLCEDEDVSIRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDVVRERAIKFLATKMKTLPEDIL--TKEVDDYIFSESKKVLYDVTGEEFVLFMKILSAL 201          
BLAST of FC877967 vs. ExPASy Swiss-Prot
Match: API5_DICDI (Apoptosis inhibitor 5 homolog OS=Dictyostelium discoideum GN=api5 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 53/189 (28.04%), Postives = 101/189 (53.44%), Query Frame = 2
Query:  203 STKTQKIKKISPMTDPSDEAKQIEKLYEFGERLNEAKDKSQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIE--EEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPL 763
            +T T     + P    +DE   I   Y+   +L+       + K +  IIE +  + + K+L+ Q I ++FK FP L  +A+D  +DL +  +E++ +RV A++ +P  C+D P++++K+VDIL QLL  +  VE +    +L+ L + +   +L +    + S +    D+     +LSF+++ + PL
Sbjct:   26 TTATPTTATVVPQVVRNDE--YINTFYDIANKLDTNPSFPDDDKLFSKIIELSSKTKQTKKLSPQFISKYFKRFPTLQEKAIDCLIDLFDSSDEDVIMRVNALKAIPTICRDNPDHIAKLVDILSQLLNTDSKVEAEHTKNSLIELYKLNSVTTLNSFLTFLESEESSMEDQPASSTLLSFLKESIIPL 212          
The following BLAST results are available for this feature:
BLAST of FC877967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
API5_DROME6.060e-3237.80Apoptosis inhibitor 5 homolog OS=Drosophila melano... [more]
API5_CHICK1.949e-3039.13Apoptosis inhibitor 5 OS=Gallus gallus GN=API5 PE=... [more]
API5_PONAB2.546e-3039.61Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2... [more]
API5_MOUSE2.546e-3039.61Apoptosis inhibitor 5 OS=Mus musculus GN=Api5 PE=2... [more]
API5_HUMAN2.546e-3039.61Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1... [more]
API5A_XENLA2.546e-3040.10Apoptosis inhibitor 5-A OS=Xenopus laevis GN=api5-... [more]
API5B_XENLA1.264e-2939.13Apoptosis inhibitor 5-B OS=Xenopus laevis GN=api5-... [more]
API5_DICDI2.022e-1928.04Apoptosis inhibitor 5 homolog OS=Dictyostelium dis... [more]
back to top
Properties
Property NameValue
Genbank descriptionIC0AAA44BD10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA44BD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877967 ID=FC877967; Name=FC877967; organism=Citrus clementina; type=EST; length=916bp
CTCGCATTCTCCACTCTTCCATTCGTAAATCATATAATCCATTCCTCCTC
GAGTGAAATTCTGTACGGTGTCTTACTATTACTCTTACTTGATGCTTTTA
CTTGAAATTCAATTTTATATAATACTTCATAAATCAAAATCATGATGATT
ATATTATATACTCATTTCAGTTTTTGTTATTGTTCGATTTCACACTCAGC
TCTCTACCAAAACGCAAAAAATCAAAAAAATTTCCCCAATGACTGACCCC
TCAGACGAGGCCAAGCAAATCGAGAAGCTCTACGAGTTCGGCGAACGACT
CAACGAGGCCAAGGACAAGTCTCAGAATGTGAAGGACTACGAGGGGATAA
TTGAAGCTGCGAAAACGAGTCTTAAAGCTAAGCAATTGGCTGCTCAGTTG
ATTCCTAGGTTTTTCAAGTTCTTTCCTGACCTATCCAGCCGCGCTGTTGA
TGCGCATCTCGATTTGATCGAGGAAGAAGAGCTTGGAGTTCGAGTGCAAG
CAATTAGGGGACTCCCTCTTTTCTGCAAGGATACGCCGGAGTATCTTTCT
AAAATTGTTGACATTCTAGTACAACTCCTTGCAGCTGAGGAAATTGTGGA
GCGTGATGCTGTGCACAAAGCACTTATGTCCCTTCTGAGGCAAGATGTGA
AAGCTTCTTTGACTGCCTTATTTAAGCACATTGGGAGTGTCGATGAACCA
AGTACAGATGAGTTTATACGTGAGAAGGTTCTAAGCTTTATAAGAGATAA
GGTTTTCCCTCTTAAAGCTGAACTCTTGAAGCCTCAGGAGGAAATGGAAA
GGCATATAACTGATTTAATAAAAAAAAGTTTGGAAGATGTAACGGGAGCA
GAATTTAGAATGTTTATGGATTTCCTGAAAAGTTTGAGTCTATTTGAAGA
GAAACCTCCTACTGAA
back to top