FC878008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_PARUW (Tyrosyl-tRNA synthetase OS=Protochlamydia amoebophila (strain UWE25) GN=tyrS PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.144e-62 Identity = 113/207 (54.59%), Postives = 154/207 (74.40%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSN----VVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 NV+D L RG ++++TS+ +R L + + +KVYCGFDPTA+SLHLGNL+ I+ L+WF R GH VA++GGAT +GDPSGK+ ER LD ++ N+ GI K I ++ +ILNN DW+K+F+F+ FL+ VG+ R+ M+AK+SVK RL SE+G+SFTEF YQ+LQGYDFL+LF+N GV V++GGSDQWG ITAGT+L Sbjct: 3 NVMDVLRERGFIDAVTSEEIRQLTN---QPIKVYCGFDPTADSLHLGNLVAIMGLAWFQRFGHTPVAIVGGATGMIGDPSGKNAERQLLDEKKIQLNLKGISKNLEAILDFNHPTAPAIILNNLDWFKNFTFISFLRDVGKLFRLSPMLAKDSVKTRLNSEEGMSFTEFCYQILQGYDFLHLFENYGVTVELGGSDQWGNITAGTDL 206
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_BACFR (Tyrosyl-tRNA synthetase OS=Bacteroides fragilis GN=tyrS PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.030e-53 Identity = 106/210 (50.48%), Postives = 142/210 (67.62%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF-----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N V+ L RG++ + LA ++ + Y G DPTA+SLH+G+L G+++L F RCGH+ +ALIGGAT +GDPSGKS ER LD +TL N I+K + + ++NNYDW K+F+FLDF ++VG+ + M+AKESVKKRL E+ GLSFTEF+YQLLQGYDFL+L++ KG +Q+GGSDQWG IT GTEL Sbjct: 2 NFVEELRWRGMVHDMMPGTEELLA---KEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRCGHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAELVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYDFLHLYETKGCKLQMGGSDQWGNITTGTEL 208
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_BACFN (Tyrosyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tyrS PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.030e-53 Identity = 106/210 (50.48%), Postives = 142/210 (67.62%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF-----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N V+ L RG++ + LA ++ + Y G DPTA+SLH+G+L G+++L F RCGH+ +ALIGGAT +GDPSGKS ER LD +TL N I+K + + ++NNYDW K+F+FLDF ++VG+ + M+AKESVKKRL E+ GLSFTEF+YQLLQGYDFL+L++ KG +Q+GGSDQWG IT GTEL Sbjct: 2 NFVEELRWRGMVHDMMPGTEELLA---KEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRCGHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAELVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYDFLHLYETKGCKLQMGGSDQWGNITTGTEL 208
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_BACTN (Tyrosyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=tyrS PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.482e-52 Identity = 105/210 (50.00%), Postives = 143/210 (68.10%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNVV-----ILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N V+ L RG+L+ I L N++ + Y G DPTA+SLH+G+L G+++L RCGH+ +ALIGGAT +GDPSGKS ER L+ +TL N I+K + + V ++NNYDW K+FSFLDF+++VG+ + M+AK+SVK+RL E+ GLSFTEF+YQLLQGYDFL+L++ KG +Q+GGSDQWG IT G EL Sbjct: 2 NFVEELRWRGMLQDIMPGTEELL---NKEQVTAYLGIDPTADSLHIGHLCGVMILRHLQRCGHKPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFLDFESDVPNRAELVNNYDWMKEFSFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYDFLHLYETKGCKLQMGGSDQWGNITTGAEL 208
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_BACV8 (Tyrosyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=tyrS PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.794e-51 Identity = 102/210 (48.57%), Postives = 142/210 (67.62%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF-----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N V+ L RG++ ++ LA ++ + Y G DPTA+SLH+G+L G+++L F RCGH+ +AL+GGAT +GDPSGKS ER L +TL N+ I+K + + ++NNYDW KDF+FLDF ++VG+ + M+AK+SV+KRL E+ GLSFTEF+YQLLQGYDFL+L++ KG +Q+GGSDQWG IT G EL Sbjct: 2 NFVEELTWRGMVHTMMPGTEELLA---KEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRCGHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAELVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYDFLHLYETKGCKLQMGGSDQWGNITTGAEL 208
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_FLAPJ (Tyrosyl-tRNA synthetase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=tyrS PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.472e-51 Identity = 103/209 (49.28%), Postives = 144/209 (68.90%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTI--FGSSNV---VILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESE-QGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N+V+ L+ RGL + L +++ Y GFDPTA+SLH+G+++ II+L GH+ +ALIGGAT +GDPSGKS ER LD TL KN+ GI+ S+ F ++N +++NNYDW KDFSF+DF + +G+ + M++K+SVKKRL +E +G+SFTEF+YQL+QGYDF YL++N +Q+GGSDQWG IT GTEL Sbjct: 3 NLVEELKWRGLFHDMMPGTEEQLT---KESTTAYIGFDPTADSLHIGSMVQIILLVHLKNFGHKPIALIGGATGMIGDPSGKSDERNLLDEATLNKNVAGIKAVLSSFLDFNTTNANAPILVNNYDWMKDFSFIDFARDIGKRITVNYMMSKDSVKKRLGAEGEGMSFTEFTYQLIQGYDFQYLYKNHNCLLQMGGSDQWGNITTGTEL 208
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_RHOBA (Tyrosyl-tRNA synthetase OS=Rhodopirellula baltica GN=tyrS PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.104e-50 Identity = 102/207 (49.28%), Postives = 139/207 (67.15%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIR---KTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 ++++ L RGLL T +N + L +S +T +Y GFDPTA SLH+G ++ +++L F R GH +AL+GGAT +GDPSGKS ER L D L+KN+ G+ + F G + +LNN+DW KD+S+L+FL+ VG+ +G M+ KESV+ RLESE GLS+TEFSY LLQ YDF+ L Q +Q GGSDQWG ITAG +L Sbjct: 15 SLIEDLRWRGLLNQTTDENGIAELLNSGPQT--IYIGFDPTATSLHVGGMMQLMMLRRFQRAGHNPIALVGGATGMIGDPSGKSEERNLLSADQLQKNVDGVAAQMRHFLDFEGDNAAKLLNNFDWMKDYSYLEFLRDVGKNFPVGAMMGKESVRSRLESEAGLSYTEFSYMLLQAYDFVNLAQTHDCRIQAGGSDQWGNITAGIDL 219
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_PORGI (Tyrosyl-tRNA synthetase OS=Porphyromonas gingivalis GN=tyrS PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.479e-50 Identity = 104/210 (49.52%), Postives = 138/210 (65.71%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSN-----VVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N V+ L RG++ I L N+ Y G DPTA+SLH+G+L+G+++L F R GH+ +ALIGGAT +GDPS KS ER LD TL N I++ + + ++NNYDW KD+SFL F++ +G+ + M+AK+SVKKRL ES GLSFTEFSYQLLQGYD+LYL++N+G +Q+GGSDQWG IT GTEL Sbjct: 2 NFVEELRWRGMIHDIMPGTEEHL---NKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRAGHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKLVNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYDYLYLYRNEGCRLQMGGSDQWGNITTGTEL 208
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_PORG3 (Tyrosyl-tRNA synthetase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=tyrS PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.479e-50 Identity = 104/210 (49.52%), Postives = 138/210 (65.71%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSN-----VVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N V+ L RG++ I L N+ Y G DPTA+SLH+G+L+G+++L F R GH+ +ALIGGAT +GDPS KS ER LD TL N I++ + + ++NNYDW KD+SFL F++ +G+ + M+AK+SVKKRL ES GLSFTEFSYQLLQGYD+LYL++N+G +Q+GGSDQWG IT GTEL Sbjct: 2 NFVEELRWRGMIHDIMPGTEEHL---NKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRAGHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKLVNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYDYLYLYRNEGCRLQMGGSDQWGNITTGTEL 208
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_FLAJ1 (Tyrosyl-tRNA synthetase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tyrS PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.155e-50 Identity = 102/213 (47.89%), Postives = 144/213 (67.61%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLK----VYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSN-----VVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESE-QGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N+V+ L+ RGL S+ + E+ LK Y GFDPTA+SLH+G+++ II+L GHQ +AL+GGAT +GDPSGKS ER L+ +TL KN+ GI+ S ++ +++NNYDW K+FSF+DF ++VG+ + M+AK+SVKKR+ E +G+SFTEF+YQL+QGYDF +L++N +Q+GGSDQWG IT GTEL Sbjct: 3 NLVEELKWRGLYHD-------SMPGTEEQLLKEVTSAYIGFDPTADSLHIGSMVQIILLVHLKNFGHQPIALVGGATGMIGDPSGKSDERNLLNEETLAKNVAGIKSVLSRFLDFNSKEQNAPIMVNNYDWMKEFSFIDFAREVGKRITVNYMMAKDSVKKRINGEGEGMSFTEFTYQLIQGYDFYHLYKNNNCLLQMGGSDQWGNITTGTEL 208 The following BLAST results are available for this feature:
BLAST of FC878008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878008 ID=FC878008; Name=FC878008; organism=Citrus clementina; type=EST; length=825bpback to top |