FC878011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878011 vs. ExPASy Swiss-Prot
Match: NLTP_RABIT (Non-specific lipid-transfer protein OS=Oryctolagus cuniculus GN=SCP2 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.173e-69 Identity = 132/231 (57.14%), Postives = 166/231 (71.86%), Query Frame = 2 Query: 68 VYVLGVGMTKFIKP--RGKVDYPELGFEAGVKAMLDAHINYDDVDQGVACYCYGDSTCGQR-VFYQFGMTGIPVYNVNNNCSTGSTGLYMGRNMIAHGAADCVLVVGFEKMFPGSLQTFFQDRANPTGTSSLMMKETRGITKAPGAAQMFGNAGREHMEKYGSELKDFAEIGRINHAHSKNNPYSQFQDEYTLEQVMNAPMIHEPLTKLQCCPTSDGAAATVLVSXEFLDK 751 V+V+GVGMTKF+KP DYP++ EAG KA+ DA I Y V+Q Y YGDSTCGQR V++ G+TGIP+ NVNNNCSTGST L+MGR +I G A+CVL +GFEKM GSL F DR NP ++ G++ P A QMFG+AG+EHMEKYG++++ FA+IG NH HS NNPYSQFQ EY+L++VM++ I + LT LQCCPTSDGAAA +L S EF+ K Sbjct: 14 VFVVGVGMTKFVKPGTEDARDYPDMAKEAGQKALADAQIPYSAVEQACIGYVYGDSTCGQRAVYHSLGLTGIPIINVNNNCSTGSTALFMGRQLIQGGMAECVLALGFEKMERGSLGAKFPDRTNPMDKHLDVLINKYGLSAHPVAPQMFGSAGKEHMEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQKEYSLDEVMSSRPIFDFLTVLQCCPTSDGAAAAILASEEFVKK 244
BLAST of FC878011 vs. ExPASy Swiss-Prot
Match: NLTP_BOVIN (Non-specific lipid-transfer protein OS=Bos taurus GN=SCP2 PE=1 SV=2) HSP 1 Score: 260.381 bits (664), Expect = 8.258e-69 Identity = 135/241 (56.02%), Postives = 168/241 (69.71%), Query Frame = 2 Query: 68 VYVLGVGMTKFIKPRGKV-DYPELGFEAGVKAMLDAHINYDDVDQGVACYCYGDSTCGQR-VFYQFGMTGIPVYNVNNNCSTGSTGLYMGRNMIAHGAADCVLVVGFEKMFPGSLQTFFQDRANPTGTSSLMMKETRGITKAPGAAQMFGNAGREHMEKYGSELKDFAEIGRINHAHSKNNPYSQFQDEYTLEQVMNAPMIHEPLTKLQCCPTSDGAAATVLVSXEFLDKRPELKDQAILI 784 V+V+GVGMTKF KP + DYP+L EAG KA+ DA I Y V+Q Y YGDST GQR +++ G+TGIP+ NVNNNCSTGST L+M R +I G ADCVL +GFEKM G + QD+ANP +M G++ +P A QMFGNAG+EHMEKYG+ L+ FA+IG NH HS NNPYSQFQ EY+L++VM + I + LT LQCCPTSDGAAA +L S F+ K LK +A+ I Sbjct: 14 VFVVGVGMTKFTKPGVENRDYPDLAKEAGQKALADAQIPYSAVEQACIGYVYGDSTSGQRAIYHSLGLTGIPIINVNNNCSTGSTALFMARQLIQGGLADCVLALGFEKMVKGPIAVNIQDKANPIDKHIEVMVNKYGLSPSPVAPQMFGNAGKEHMEKYGTTLEHFAKIGWKNHKHSVNNPYSQFQKEYSLDEVMTSRKIFDFLTVLQCCPTSDGAAAAILASEAFVQKH-NLKPKAVEI 253
BLAST of FC878011 vs. ExPASy Swiss-Prot
Match: NLTP_HUMAN (Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 1.079e-68 Identity = 130/231 (56.28%), Postives = 163/231 (70.56%), Query Frame = 2 Query: 68 VYVLGVGMTKFIKP--RGKVDYPELGFEAGVKAMLDAHINYDDVDQGVACYCYGDSTCGQR-VFYQFGMTGIPVYNVNNNCSTGSTGLYMGRNMIAHGAADCVLVVGFEKMFPGSLQTFFQDRANPTGTSSLMMKETRGITKAPGAAQMFGNAGREHMEKYGSELKDFAEIGRINHAHSKNNPYSQFQDEYTLEQVMNAPMIHEPLTKLQCCPTSDGAAATVLVSXEFLDK 751 V+V+GVGMTKF+KP DYP+L EAG KA+ DA I Y VDQ Y +GDSTCGQR +++ GMTGIP+ NVNNNC+TGST L+M R +I G A+CVL +GFEKM GSL F DR PT ++ G++ P A QMFG AG+EHMEKYG++++ FA+IG NH HS NNPYSQFQDEY+L++VM + + + LT LQCCPTSDGAAA +L S F+ K Sbjct: 14 VFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTCGQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGIKFSDRTIPTDKHVDLLINKYGLSAHPVAPQMFGYAGKEHMEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQDEYSLDEVMASKEVFDFLTILQCCPTSDGAAAAILASEAFVQK 244
BLAST of FC878011 vs. ExPASy Swiss-Prot
Match: NLTP_CHICK (Non-specific lipid-transfer protein (Fragment) OS=Gallus gallus GN=SCP2 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.840e-68 Identity = 132/241 (54.77%), Postives = 167/241 (69.29%), Query Frame = 2 Query: 68 VYVLGVGMTKFIKP-RGKVDYPELGFEAGVKAMLDAHINYDDVDQGVACYCYGDSTCGQRVFYQ-FGMTGIPVYNVNNNCSTGSTGLYMGRNMIAHGAADCVLVVGFEKMFPGSLQTFFQDRANPTGTSSLMMKETRGITKAPGAAQMFGNAGREHMEKYGSELKDFAEIGRINHAHSKNNPYSQFQDEYTLEQVMNAPMIHEPLTKLQCCPTSDGAAATVLVSXEFLDKRPELKDQAILI 784 V+V+GVGMTKF KP VDYP+L EAG KA+ DA I Y V+Q Y YGDSTCGQR Y G+TGIP+ NVNNNC+TGST L+M R ++ G ADCVL +GFE+M GSL + F DR NP +M G+ AP QMF NAG+EHMEKYG+ + FA+I NH+HS NNPYSQFQ +YTL++V+ + + + LT LQCCPTS+GAAA +L S +F+ KR +L+ QA+ I Sbjct: 18 VFVVGVGMTKFAKPSENSVDYPDLAKEAGQKALADAGIPYSAVEQACVGYVYGDSTCGQRAIYHGLGLTGIPIINVNNNCATGSTALFMSRQLVEGGLADCVLALGFERMAKGSLASGFSDRTNPMDKHLEIMINKYGLASAPITPQMFANAGKEHMEKYGTNPEYFAKIAWKNHSHSTNNPYSQFQKKYTLDEVLQSRKVFDFLTVLQCCPTSNGAAAAILASEDFV-KRHKLQPQAVEI 257
BLAST of FC878011 vs. ExPASy Swiss-Prot
Match: NLTP_RAT (Non-specific lipid-transfer protein OS=Rattus norvegicus GN=Scp2 PE=1 SV=3) HSP 1 Score: 254.988 bits (650), Expect = 3.470e-67 Identity = 124/231 (53.68%), Postives = 167/231 (72.29%), Query Frame = 2 Query: 68 VYVLGVGMTKFIKPRGKV--DYPELGFEAGVKAMLDAHINYDDVDQGVACYCYGDSTCGQR-VFYQFGMTGIPVYNVNNNCSTGSTGLYMGRNMIAHGAADCVLVVGFEKMFPGSLQTFFQDRANPTGTSSLMMKETRGITKAPGAAQMFGNAGREHMEKYGSELKDFAEIGRINHAHSKNNPYSQFQDEYTLEQVMNAPMIHEPLTKLQCCPTSDGAAATVLVSXEFLDK 751 V+V+GVGMTKF+KP G+ DYP+L EAG KA+ D I Y V+Q Y YG+STCGQR +++ G+TGIP+ NVNNNCSTGST L+M + ++ G A+CVL +GFEKM GSL T + DR+NP ++ G++ P A Q+FG+AG+EHME YG++++ FA+IG NH HS NNPYSQFQDEY+L+++M + + + LT LQCCPTSDGAAA ++ S EF+ K Sbjct: 14 VFVVGVGMTKFMKPGGENSRDYPDLAKEAGQKALADRQIPYSAVEQACVGYVYGESTCGQRAIYHSLGLTGIPIINVNNNCSTGSTALFMAQQLVQGGLANCVLALGFEKMEKGSLGTKYSDRSNPLEKHIDVLINKYGMSACPFAPQLFGSAGKEHMETYGTKVEHFAKIGWKNHKHSVNNPYSQFQDEYSLDEIMKSRPVFDFLTVLQCCPTSDGAAAAIVSSEEFVQK 244
BLAST of FC878011 vs. ExPASy Swiss-Prot
Match: NLTP_MOUSE (Non-specific lipid-transfer protein OS=Mus musculus GN=Scp2 PE=1 SV=3) HSP 1 Score: 252.677 bits (644), Expect = 1.722e-66 Identity = 128/242 (52.89%), Postives = 169/242 (69.83%), Query Frame = 2 Query: 35 TTAIMVGKKQPVYVLGVGMTKFIKPRGKV--DYPELGFEAGVKAMLDAHINYDDVDQGVACYCYGDSTCGQR-VFYQFGMTGIPVYNVNNNCSTGSTGLYMGRNMIAHGAADCVLVVGFEKMFPGSLQTFFQDRANPTGTSSLMMKETRGITKAPGAAQMFGNAGREHMEKYGSELKDFAEIGRINHAHSKNNPYSQFQDEYTLEQVMNAPMIHEPLTKLQCCPTSDGAAATVLVSXEFLDK 751 + A+ + + V+V+GVGMTKF+KP G+ DYP++ EAG KA+ DA I Y V+Q Y YGDST GQR +++ G+TGIP+ NVNNNCSTGST L+M +I G A+CVL +GFEKM GS+ T F DR PT ++ + G++ P QMFG AG+EHMEKYG++++ FA+IG NH HS NN YSQFQDEY+LE+VM + + + LT LQCCPTSDGAAA +L S EF+ + Sbjct: 3 SVALKSPRLRRVFVVGVGMTKFMKPGGENSRDYPDMAKEAGQKALEDAQIPYSAVEQACVGYVYGDSTSGQRAIYHSLGLTGIPIINVNNNCSTGSTALFMAHQLIQGGLANCVLALGFEKMERGSIGTKFSDRTTPTDKHIEVLIDKYGLSAHPITPQMFGYAGKEHMEKYGTKVEHFAKIGWKNHKHSVNNTYSQFQDEYSLEEVMKSKPVFDFLTILQCCPTSDGAAAAILSSEEFVQQ 244
BLAST of FC878011 vs. ExPASy Swiss-Prot
Match: Y793_METTH (Uncharacterized protein MTH_793 OS=Methanobacterium thermoautotrophicum GN=MTH_793 PE=4 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.374e-21 Identity = 73/229 (31.88%), Postives = 110/229 (48.03%), Query Frame = 2 Query: 68 VYVLGVGMTKFIKPRGKVDYPELGFEAGVKAMLDAHINYDDVDQGVACYCYGDSTCGQRVFYQF---------GMTGIPVYNVNNNCSTGSTGLYMGRNMIAHGAADCVLVVGFEKMFPGSLQTFFQDRANPTGTSSLMMKETRGITKAPGAAQMFGNAGREHMEKYGSELKDFAEIGRINHAHSKNNPYSQFQDEYTLEQVMNAPMIHEPLTKLQCCPTSDGAAATVL 727 V V+GV TKF + V + ++ EAG+ A+ DA + D+D A Y G+ + G + + G+T IP V C++G L G +A G D V+ G EKM D +PT + + + ++ R HM +YG+ + A + INH ++ NNP +QF + T+EQVMN+ M+ +PL L C P SDGAAA +L Sbjct: 4 VAVIGVSQTKFGE-LWDVSFRDMITEAGLGAIEDAGVEGADLD---AMYV-GNMSAGLFIKQEHISSLIADHAGLTPIPSTRVEAACASGGLALRSGIMAVASGYHDIVIAAGVEKM---------TDVVDPTPAIATASDQEWEAQQGVTFPSLYAMMARRHMYEYGTTREQLAMVSVINHENASNNPRAQFPMKVTVEQVMNSTMVADPLRLLDCSPISDGAAAVIL 218
BLAST of FC878011 vs. ExPASy Swiss-Prot
Match: Y1549_METJA (Uncharacterized protein MJ1549 OS=Methanocaldococcus jannaschii GN=MJ1549 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.666e-18 Identity = 70/229 (30.57%), Postives = 104/229 (45.41%), Query Frame = 2 Query: 68 VYVLGVGMTKFIKPRGKVDYPELGFEAGVKAMLDAHINYDDVDQGV-----ACYCYGDSTCGQRVFYQFGMTGIPVYNVNNNCSTGSTGLYMGRNMIAHGAADCVLVVGFEKMFPGSLQTFFQDRANPTGTSSLMMKETRGITKAPGAAQMFGNAGREHMEKYGSELKDFAEIGRINHAHSKNNPYSQFQDEYTLEQVMNAPMIHEPLTKLQCCPTSDGAAATVLVSXE 739 V ++G G TKF + + + L EAGVKA+ A I+ D+D+ A G + G+ IP V C++GS L +A GA+D VLV G EKM D + T S + ++ + +M +YG L++ + I H ++ N Y+QF + TLEQV+N+ + EPL L C P SDGAAA ++ E Sbjct: 4 VAIIGYGQTKFGELWER-SFRSLIVEAGVKAVEAAGIDGKDIDEMYVGNMSAGLFVGQEHIASLIAEHAGLNPIPSTRVEAACASGSLALRQAVLNVASGASDVVLVGGVEKM---------TDVVDATSAISSASDQEWEALFGATFPSLYAMMAQRYMYEYGLTLEELSMWSVIMHENASKNRYAQFPFKVTLEQVLNSSPVAEPLRLLHCSPVSDGAAALIVCEAE 222 The following BLAST results are available for this feature:
BLAST of FC878011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878011 ID=FC878011; Name=FC878011; organism=Citrus clementina; type=EST; length=788bpback to top |