FC878025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.688e-64 Identity = 131/229 (57.21%), Postives = 155/229 (67.69%), Query Frame = 3 Query: 114 NFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 +F + IE V++A+ D A Y +A+ Y N L+Y LKYEKNPK K+ I KFTEYL RAE+++ L+ A +A + K + + KLR L+SAI+ EKPNVKW DVAGLE AK+AL+EAVILPVKFP F G R+P LLYGPPGTGKSYLAKAVATEA+STFFS+SSSDLVSKWMGESEKLV LF MAREN PSIIFID Sbjct: 5 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRAEQLKKHLESEEANAAKKSPSAGSGSNGGNKKISQEEGEDNGGE-DNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFID 232
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 6.291e-64 Identity = 133/231 (57.58%), Postives = 163/231 (70.56%), Query Frame = 3 Query: 123 EQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEA-DSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 ++AI+ +A QED AGNY +A LY +A++YF +KYE + K K++I K TEYL RAE+++ L + P G A A K +DPE+ KL+ L AI+ E+PNVKW+DVAGLE AK+AL+EAVILP+KFP FTGKR PWR LL+GPPGTGKSYLAKAVATEA +STFFSISSSDLVSKW+GESEKLV +LFQ+AREN PSIIFID Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKREKKPQKPVKEGQPAPADE-----KGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFID 234
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 8.216e-64 Identity = 132/231 (57.14%), Postives = 163/231 (70.56%), Query Frame = 3 Query: 123 EQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEA-DSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 ++AI+ +A QED AGNY +A LY +A++YF +KYE + K K++I K TEYL RAE+++ L + P G + A K +DPE+ KL+ L AI+ E+PNVKW+DVAGLE AK+AL+EAVILP+KFP FTGKR PWR LL+GPPGTGKSYLAKAVATEA +STFFSISSSDLVSKW+GESEKLV +LFQ+AREN PSIIFID Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADE-----KGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFID 234
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.391e-63 Identity = 131/231 (56.71%), Postives = 163/231 (70.56%), Query Frame = 3 Query: 123 EQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEA-DSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 ++AI+ +A QED AGNY +A LY +A++YF +KYE + K K++I + TEYL RAE+++ L + P G + A K +DPE+ KL+ L AI+ E+PNVKW+DVAGLE AK+AL+EAVILP+KFP FTGKR PWR LL+GPPGTGKSYLAKAVATEA +STFFSISSSDLVSKW+GESEKLV +LFQ+AREN PSIIFID Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAQCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADE-----KGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFID 234
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 6.956e-63 Identity = 130/228 (57.02%), Postives = 159/228 (69.74%), Query Frame = 3 Query: 123 EQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEA-DSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 ++AI+ +A QED AGNY +A LY +A++YF +KYE + K K++I K TEYL RAE+++ L P K +DPE+ KL+ L AI+ E+PNVKW+DVAGLE AK+AL+EAVILP+KFP FTGKR PWR LL+GPPGTGKSYLAKAVATEA +STFFSISSSDLVSKW+GESEKLV +LFQ+AREN PSIIFID Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKKEKKPQK--PVKEEQSGPVDEKGNDSDGEAESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFID 234
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.888e-62 Identity = 126/230 (54.78%), Postives = 152/230 (66.09%), Query Frame = 3 Query: 126 QAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDD-----GGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 +AI VK A+ DNA Y A+ Y +AL+YF LKYEKN K KE I K EYL RAE+++ L + NG+ + P D + KLR+ L SAI+ EKPNV+W+D+AGLE+AK+AL+E V+LP+K PQ F+ R+PW LLYGPPGTGKSYLAKAVATEA STFFSISSSDLVSKWMGESE+LV LF+MARE PSIIFID Sbjct: 9 KAISLVKTAIDNDNAEQYPDAYKYYQSALDYFMMALKYEKNEKSKEIIRSKVIEYLDRAEKLKVYLQEKNNQISSKSRVSNGNVEGSNSPTANEAL----------DSDAKKLRSALTSAILVEKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSHGRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFID 228
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.888e-62 Identity = 123/230 (53.48%), Postives = 155/230 (67.39%), Query Frame = 3 Query: 114 NFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDG-GPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 NF ++AI+ V+QA ++DNA NYA+A LY+ +LE+F T LKYEK+ + K I K EYL+RAE+++ LD P G + DPE K L+S+I+ KPNVKW+DVAGL AK+ L+EAVI P+KFPQ FTG R+PW+ LLYGPPGTGKSYLAKAVATE STFFSIS SD+V+KW+G+SEKLV LF+MARE S+IFID Sbjct: 5 NFLQKAIQIVQQATEQDNAKNYAEAHRLYIQSLEWFTTALKYEKSERSKATIKAKTLEYLQRAEQLKEYLDKSKNKKPVAVGGNKSNSAGSANGAGKSAKEDDEDMDPEDKKRNDSLSSSIVTTKPNVKWDDVAGLYQAKEYLKEAVIFPIKFPQMFTGNRKPWKGILLYGPPGTGKSYLAKAVATEISSTFFSISPSDIVTKWLGDSEKLVKQLFEMAREKNNSVIFID 234
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.401e-60 Identity = 123/234 (52.56%), Postives = 166/234 (70.94%), Query Frame = 3 Query: 105 MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNP-KIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEA-DSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 M ++ ++AI+ V +A +ED A NY +A LY +A+EYF +KYE + K KE+I K +YL RAE+++ L + +G V + + + ++PE+ KL+ L A++ EKPN++WNDVAGLE AK+AL+EAVILP+KFP FTGKR PWR LL+GPPGTGKSYLAKAVATEA +STFFS+SSSDL+SKW+GESEKLV +LF++AR++ PSIIFID Sbjct: 1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRN----KEKHGKKPVK---ENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFID 227
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.401e-60 Identity = 123/234 (52.56%), Postives = 166/234 (70.94%), Query Frame = 3 Query: 105 MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNP-KIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEA-DSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 M ++ ++AI+ V +A +ED A NY +A LY +A+EYF +KYE + K KE+I K +YL RAE+++ L + +G V + + + ++PE+ KL+ L A++ EKPN++WNDVAGLE AK+AL+EAVILP+KFP FTGKR PWR LL+GPPGTGKSYLAKAVATEA +STFFS+SSSDL+SKW+GESEKLV +LF++AR++ PSIIFID Sbjct: 1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRN----KEKHGKKPVK---ENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFID 227
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.401e-60 Identity = 123/234 (52.56%), Postives = 165/234 (70.51%), Query Frame = 3 Query: 105 MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNP-KIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEA-DSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 M ++ ++AI+ V +A +ED A NY +A LY +A+EYF +KYE + K KE+I K +YL RAE+++ L +G V + + + ++PE+ KL+ L A++ EKPN++WNDVAGLE AK+AL+EAVILP+KFP FTGKR PWR LL+GPPGTGKSYLAKAVATEA +STFFS+SSSDL+SKW+GESEKLV +LF++AR++ PSIIFID Sbjct: 1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLDRAEKLKDYLRS----KEKHGKKPVK---ENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFID 227 The following BLAST results are available for this feature:
BLAST of FC878025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 355
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878025 ID=FC878025; Name=FC878025; organism=Citrus clementina; type=EST; length=801bpback to top |