FC878039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP6_ARATH (Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.686e-63 Identity = 114/178 (64.04%), Postives = 145/178 (81.46%), Query Frame = 1 Query: 373 RRGRSYIAPEGXXXXXKII----VEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSP---GDMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 RRGRS+IAPEG + + QS W ++PPELL DIIQRIE+ Q+ WP RRDVVACASVCKSWR +TKE+++ PE GL++FP+SL+QPGPRDAPIQC+I+RER TG YRLYLGLSP GD SKLLL+A+++R+AT +F++SL G+DFSR+S+ Y+GKLRSNFLG KFT+Y+ Sbjct: 41 RRGRSHIAPEGSSVSSSLSTNEGLNQSIWVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYE 218
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.093e-58 Identity = 103/154 (66.88%), Postives = 132/154 (85.71%), Query Frame = 1 Query: 433 EQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSP---GDMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 +Q +WAN+PPELL D+IQR+EAS+ +WPARR VVACA+VC+SWR VTKE+++T E+CG ++FP+SLKQPGPR+ P+QC++RR+R T TY LYLGLSP G+ KLLLAARKIR+AT T F+ISLV +DFS +S+TYVGKL+ NFLG KFTI+D Sbjct: 64 QQGRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRATRTSFVISLVSNDFSLSSSTYVGKLKPNFLGTKFTIFD 217
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.570e-58 Identity = 111/169 (65.68%), Postives = 133/169 (78.70%), Query Frame = 1 Query: 385 SYIAPEGXXXXXKIIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPGDM--SKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 S+IAP+ I QS WA++PPELLHDII R+E S+T+WPAR VV+CASVCKSWR +T EI+R PEQCG L+FP+SLKQPGPRD+PIQC+I+R R T TY LY GL P + KLLLAAR+IR+AT TDF+ISL +FSR+S+TYVGKLRS FLG KFTIYD Sbjct: 29 SHIAPDQTTPPLDNI-PQSPWASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQPGPRDSPIQCFIKRNRATATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISLSAKNFSRSSSTYVGKLRSGFLGTKFTIYD 196
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.898e-53 Identity = 108/214 (50.47%), Postives = 140/214 (65.42%), Query Frame = 1 Query: 268 MALKNIVKEMRDXXXXXXXXXXXXXXXXXXKHNMRRR------GRSYIAPEGXXXXXKIIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSP--GDMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 M+ +++++EMRD +H++R R G +A G + +QS WA +PPELL +++ RIE S+ WP+RRDVVACA VC+SWR +TKEI+R PE G L+FP+SLKQPGPRD ++C+IRR R T TY LY+GL+ D K LLAARK RK T TD+LISL D S+ SNTY+GKLRSNFLG KFT+YD Sbjct: 1 MSFRSLIQEMRDEFGSIS------------RHSLRSRSHRGGGGAPRVAAVGPAEAAAM--QQSCWAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYD 200
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.227e-51 Identity = 98/209 (46.89%), Postives = 143/209 (68.42%), Query Frame = 1 Query: 268 MALKNIVKEMRDXXXXXXXXXXXXXXXXXXKHNMRRRGRSYIAPEGXXXXXKIIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSP---GDMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 M+ ++IV+++RD RG+S +I+++S+WA++PPELL D+I+R+EAS+++WP+R+DVV+CA+VCK+WR + KEI+ +PE CG L+FP+SLKQPGPRD IQC+I+R++ TY LYL LS D K LL+A++ RK T T+++IS+ D+ SR+S+TY+GKLRSNFLG KF IYD Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVH-ELCDADLIIQESRWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYD 208
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.227e-51 Identity = 98/209 (46.89%), Postives = 141/209 (67.46%), Query Frame = 1 Query: 268 MALKNIVKEMRDXXXXXXXXXXXXXXXXXXKHNMRRRGRSYIAPEGXXXXXKIIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG---DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 M+ ++IV+++RD K + RG + + ++++ WAN+PPELL D+I+R+E S++ WPARR VVACASVC+SWR + KEI+++PE G ++FPVSLKQPGPRDA +QC+I+R++ TY LYL LSP + K LL+A++IR+ T T+++IS+ D SR+SNTY+GK+RSNFLG KF IYD Sbjct: 1 MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGS---VQDSHEEQLVVTIQETPWANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNTYIGKIRSNFLGTKFIIYD 206
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.098e-50 Identity = 96/209 (45.93%), Postives = 144/209 (68.90%), Query Frame = 1 Query: 268 MALKNIVKEMRDXXXXXXXXXXXXXXXXXXKHNMRRRGRSYIAPEGXXXXXKIIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPGDMS---KLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 M+ ++IV+++RD + RG+S + ++V+QS+W +PPELL D+++R+E +++WP+R+DVVACA+VC++WR + K+I+++PE CG L+FPVSLKQPGPRD IQC+I+R++ TY LYL LSP +S K LLAA++ R+ATST+++IS+ + SR+SN YVGK+RSNFLG KF +YD Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKS-LGSLSELRDRPVVVDQSRWVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYD 208
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.740e-50 Identity = 91/157 (57.96%), Postives = 127/157 (80.89%), Query Frame = 1 Query: 424 IIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG---DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 +IV+ S+WAN+PPELL D+I+R+E S+++WPAR+ VVACASVC+SWRA+ +EI+ PE CG L+FPVSLKQPGPRDA IQC+I+R++ T+ L+L LSP + K LL+A++ R+ T T+++IS+ D+ SR+SN+Y+GKLRSNFLG KF +YD Sbjct: 52 VIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFLGTKFLVYD 208
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.041e-49 Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 1 Query: 367 MRRRGRSYIAPEGXXXXXKIIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG--DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 +RR + P +++ +S W +PPELL +++ R+E S+ WP RRDVVACA VC+SWR + +EI+RTPE G L+FP+SLKQPGPRDAP++C+I R R T TY LY+GL+ D K LLAARK R+ T T++LISL +D S+ +++YVGKLRSNFLG KFTIYD Sbjct: 29 VRRVAAAAEEPPDESSAAALVMRESCWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNFLGTKFTIYD 203
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.319e-49 Identity = 92/175 (52.57%), Postives = 127/175 (72.57%), Query Frame = 1 Query: 370 RRRGRSYIAPEGXXXXXKIIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG---DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 R RG+S I P ++ +QS+WA +PPELL D+++R+E ++WP+R+DVVACASVC +WR + K+I+R PE CG L+FPVSLKQPGPRD IQC+I+R++ TY LYL LS + K LL+A++ R+ T TD++IS+ + SR+S+ Y+GKLRSNFLG KF IYD Sbjct: 32 RHRGKS-IGPSSELDDTPVVAQQSKWAGLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKNISRSSSGYIGKLRSNFLGTKFIIYD 205 The following BLAST results are available for this feature:
BLAST of FC878039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878039 ID=FC878039; Name=FC878039; organism=Citrus clementina; type=EST; length=887bpback to top |