FC878053

Overview
NameFC878053
Unique NameFC878053
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 61/176 (34.66%), Postives = 93/176 (52.84%), Query Frame = 1
Query:   40 CSPNMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 552
            CSPN   + H Y+ V+ G+ LH  E G+GP  +   HGFPE W+SWR+Q+             D +GYG S  P E E+ + + +  +++  L+ LGI +   +  D+     +  AL HPERV  V +L  P +PP       E  +S+P   Y   +QEPG AEA+  ++ ++T
Sbjct:  230 CSPN--DVSHGYVTVKPGIRLHFVEMGSGP-AICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT 402          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.463e-22
Identity = 60/176 (34.09%), Postives = 94/176 (53.41%), Query Frame = 1
Query:   40 CSPNMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 552
            C+PN   + H Y+ V+ G+ LH  E G+GP  +   HGFPE W+SWR+Q+             D +GYG S  P E E+ + + +  +++  LD LGI +   +  D+     +  AL +PERV  V +L  PF+PP       +  +S+P   Y   +QEPG AEA+  ++ ++T
Sbjct:  230 CNPN--DVSHGYVTVKPGIRLHFVEMGSGP-ALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT 402          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 9.483e-22
Identity = 61/175 (34.86%), Postives = 90/175 (51.43%), Query Frame = 1
Query:   43 SPNMDKIEHKYIKVQG-LNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 552
            S N   + H Y+ V+  + LH  E G+GP  V   HGFPE WYSWR+Q+             D +GYG S  P E E+   + +  +++  LD LG+++   +  D+G    +  AL +PERV  V +L  PFIP        E  K+ P   Y   +QEPG AEA+  ++ ++T
Sbjct:  231 SCNPSDMSHGYVTVKPRVRLHFVELGSGP-AVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRT 404          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 60/176 (34.09%), Postives = 92/176 (52.27%), Query Frame = 1
Query:   40 CSPNMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 552
            C P+   + H Y+ ++ G+ LH  E G+GP  V   HGFPE W+SWR+Q+             D +GYG S  P E E+ S + +  D++  L+ LG+++   +  D+G    +  AL +PERV  V +L  PF+P        E  K+ P   Y   +QEPG AEA+  ++  +T
Sbjct:  232 CDPSA--LSHGYVLIKPGVRLHFVEMGSGP-AVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQLYFQEPGVAEAELEQNLDRT 404          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.046e-16
Identity = 50/177 (28.25%), Postives = 83/177 (46.89%), Query Frame = 1
Query:   52 MDKIEHKYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP---FIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNI 567
            MD ++ +++   G+ LHVA  G   GP ++V LHGFPE WY W++Q+            PD RGY LSD P   +      + +D++  +      K  ++  D+G   A+  A   PE +  +I + +P    +   T  +     +  YI+ +Q P   EA    +D  T+ + I
Sbjct:    1 MDGVKCQFVNTNGITLHVAAAGREDGP-LIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPLYPPQWLKSSYIAYFQLPDIPEASLRENDYDTLDKAI 176          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.490e-16
Identity = 46/126 (36.51%), Postives = 65/126 (51.59%), Query Frame = 1
Query:   67 HKYIKVQ--GLNLHVAETGT-GPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 435
            H Y++++  GL  H    G  G  +++ LHGFPE WYSWRHQ+             D RGYG SD PA  E      +  D+   LD LG +K  L+  D+G   A+L A+ +PE +  +I +  P
Sbjct:   69 HCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSEYRVVAL-DLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFP 193          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: EPHX4_HUMAN (Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.466e-14
Identity = 43/126 (34.13%), Postives = 64/126 (50.79%), Query Frame = 1
Query:   67 HKYIKVQ--GLNLHVAETGT-GPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 435
            H Y++++  GL  H    G  G  +++ LHGFPE WYSWR+Q+             D RGYG +D P   +      +  D+   LD LG +K  L+  D+G   A+L A+ +PE V  +I +  P
Sbjct:   71 HCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSEYRVVAL-DLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFP 195          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: EPHX3_XENTR (Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.241e-13
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 1
Query:   64 EHKYIKVQ--GLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRW 501
            +H YI+++  G+  H   +G   N +++ LHGFPE WYSWR+Q+             D RG+G SD P+  E    + +  DL   +  LG ++  LV  D+G   A+ FA+ H + V+ +I +  P  P    ++  S P   + SR+
Sbjct:   74 QHGYIRMKDSGIRFHYVASGDKRNPLMLLLHGFPENWYSWRYQLDEFSNGYRTVAI-DLRGFGGSDAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLIVMNAPH-PSAFHDYVLSHPSQLFSSRY 220          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: EPHX3_MOUSE (Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.612e-13
Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   76 IKVQGLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 435
            +K  GL LH    G G   +++FLHGFPE W+SWR+Q+             D RGY  SD P E +  +   + +D+  T+  LG +K  LV+ D+GA  A+ F++ +P  V  ++    P
Sbjct:   87 VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQL-REFQSHFHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMVVANGP 206          
BLAST of FC878053 vs. ExPASy Swiss-Prot
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12
Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1
Query:   64 EHKYI--KVQGLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSG-VITLGVP 435
            EH ++  K  GL LH    G G   +++FLHGFPE W+SWR+Q+             D RGYG SD P + +  +   +  D+   +  LG +K  LVA D+GA  A+ F++ +P  V   V+  G P
Sbjct:   74 EHGFLNLKSSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQL-REFQSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAP 200          
The following BLAST results are available for this feature:
BLAST of FC878053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
HYES_RAT6.567e-2334.66Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE1.463e-2234.09Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
HYES_HUMAN9.483e-2234.86Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
HYES_PIG1.618e-2134.09Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
YFHM_BACSU2.046e-1628.25AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
EPHX4_MOUSE3.490e-1636.51Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
EPHX4_HUMAN1.466e-1434.13Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 ... [more]
EPHX3_XENTR1.241e-1331.54Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3... [more]
EPHX3_MOUSE3.612e-1334.71Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 ... [more]
EPHX3_HUMAN1.051e-1235.94Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ12YE12RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ12YE12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878053 ID=FC878053; Name=FC878053; organism=Citrus clementina; type=EST; length=661bp
TCTTCATATACCTTAACATAAACAGCAGTGCGCAGGATTTGCTCTCCAAA
TATGGACAAAATTGAGCACAAGTACATCAAAGTACAAGGCCTGAACCTTC
ACGTCGCCGAGACAGGAACAGGTCCAAATGTGGTGGTGTTTTTGCATGGG
TTCCCCGAGATATGGTACTCGTGGCGCCATCAGATGGTGGCTGTAGCCGC
TGCTGGCTTCAGGGCTATTGCGCCTGATTACAGAGGCTACGGCCTCTCTG
ACCCACCTGCTGAACCCGAAAAGGCCTCCTTTAAAGACATCACTAATGAT
CTCCTCGCCACTTTAGATCACCTCGGAATTAACAAGGTTTTTCTTGTTGC
AAAAGATTTTGGAGCCCGGCCTGCCTACCTGTTTGCACTTCTACACCCAG
AGAGGGTCTCCGGTGTTATTACATTAGGAGTGCCGTTTATACCTCCAGGT
ACTGCTGAATTTCACAAATCCCTTCCTGAAGGTTTCTACATATCGAGATG
GCAGGAACCTGGACGAGCAGAAGCTGATTTTGGTCGCCATGATGCAAAGA
CTGTGGTGAGAAACATTTACATTCTTTTCTCCAGAAGTGAAATACCAATA
GCACCTGAAAACAAGGAGATCATGGATTTGGTGGATGCTTCTACTCCTCT
TCCACCTTGGC
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