FC878108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIAS_HUMAN (Lipoyl synthase, mitochondrial OS=Homo sapiens GN=LIAS PE=2 SV=3) HSP 1 Score: 249.21 bits (635), Expect = 2.218e-65 Identity = 132/256 (51.56%), Postives = 162/256 (63.28%), Query Frame = 3 Query: 117 PTKFPQTLAGLRARLASESPALSDFI--DLQSNSSYSVEVGTXXXXXXXXX----WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 P + +L + L P L DF+ DL S++ G W+K IP G Y ++K LR L LHTVCEEA+CPN+GECW GGE TATATIM++GDTCTRGCRFC+VKT+R N A+AIA WGLDYVV+TSVDRDD+ D G+ H A+TV LKE P +L+E L PDFRG+ + +VA SGL+V+AHN+ETV ELQS VRD RANF QSL VL AK P ++ TSI Sbjct: 24 PVRPLSSLPDKKKELLQNGPDLQDFVSGDLADRSTWDEYKGNLKRQKGERLRLPPWLKTEIPMGKNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTRGCRFCSVKTARNPPPLDASEPYNTAKAIAEWGLDYVVLTSVDRDDMPDGGAEHIAKTVSYLKERNPKILVECLTPDFRGDLKAIEKVALSGLDVYAHNVETVPELQSKVRDPRANFDQSLRVLKHAKKVQP-DVISKTSI 278
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIAS_MOUSE (Lipoyl synthase, mitochondrial OS=Mus musculus GN=Lias PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 8.429e-65 Identity = 130/237 (54.85%), Postives = 157/237 (66.24%), Query Frame = 3 Query: 174 PALSDFI--DLQSNSSYSVEVGTXXXXXXXXX----WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 P L DF+ DL S++ G W+K IP G Y ++K LR L LHTVCEEA+CPN+GECW GGE TATATIM++GDTCTRGCRFC+VKT+R N A+AIA WGLDYVV+TSVDRDD+AD G+ H A+TV LKE P +L+E L PDFRG+ V +VA SGL+V+AHN+ETV ELQ VRD RANF QSL VL AK+ P ++ TSI Sbjct: 42 PDLQDFVSGDLADKSTWDEYKGNLKRQKGERLRLPPWLKTKIPMGKNYNKLKNTLRNLSLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTRGCRFCSVKTARNPPPLDANEPDNTAKAIAEWGLDYVVLTSVDRDDVADGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLRHAKEVQP-DVVSKTSI 277
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIAS_BOVIN (Lipoyl synthase, mitochondrial OS=Bos taurus GN=LIAS PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.438e-64 Identity = 121/201 (60.20%), Postives = 146/201 (72.64%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K IP G Y ++K LR L LHTVCEEA+CPN+GECW GGE TATATIM++GDTCTRGCRFC+VKT+R N A+AIA WGLDYVV+TSVDRDD+ D G+ HFA+TV LKE P +L+E L PDFRG+ + +VA SGL+V+AHN+ETV ELQ VRD RANF QSL VL AK+ P ++ TSI Sbjct: 79 WLKTEIPMGKNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTRGCRFCSVKTARNPPPLDANEPYNTAKAIAEWGLDYVVLTSVDRDDMPDGGAEHFAKTVSYLKERNPKILVECLTPDFRGDLKAIEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLKHAKEVRP-DVISKTSI 278
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIAS_RAT (Lipoyl synthase, mitochondrial OS=Rattus norvegicus GN=Lias PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.203e-64 Identity = 129/245 (52.65%), Postives = 157/245 (64.08%), Query Frame = 3 Query: 150 RARLASESPALSDFI--DLQSNSSYSVEVGTXXXXXXXXX----WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 + + P L DF+ DL S++ G W+K IP G Y ++K LR L LHTVCEEA+CPN+GECW GGE TATATIM++GDTCTRGCRFC+VKT+R N A AIA WGLDYVV+TSVDRDD+ D G+ H A+TV LKE P +L+E L PDFRG+ V +VA SGL+V+AHN+ETV ELQ VRD RANF QSL VL AK+ P ++ TSI Sbjct: 34 KKKFLHNGPDLQDFVSGDLADKSTWDDYKGNLKRQKGERLRLPPWLKTKIPMGKNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTRGCRFCSVKTARNPPPLDPSEPDNTARAIAEWGLDYVVLTSVDRDDVVDGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLKHAKEVQP-DVVSKTSI 277
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_SCHPO (Lipoyl synthase, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC8D2.15 PE=2 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 3.315e-61 Identity = 123/249 (49.40%), Postives = 155/249 (62.25%), Query Frame = 3 Query: 144 GLRARLASESPALSDFIDLQS--------NSSYSVEVGTXXXXXXXXXWMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 G +LA + P+ +DF+++ VE+ W+K +P G + +IK LR LHTVCEEAKCPN+GECW G + ATATIM++GDTCTRGCRFC+VKTSR N AEAI W L Y+V+TSVDRDDL D G+ H A+T++K+KE P++L+EAL PDF G V VAKSGL+VFAHN+ETVEEL VRD RA ++QSL VL K P +T TSI Sbjct: 26 GFSEKLA-KGPSFADFLNMDKPLTADEAFELDRKVELPNGSIHKRLPSWLKTKVPLGTNFNRIKHDLRGSHLHTVCEEAKCPNIGECWGGKDKSRATATIMLMGDTCTRGCRFCSVKTSRRPGPLDPNEPENTAEAIKQWNLGYIVLTSVDRDDLTDLGANHIAKTIQKIKEKAPHILVEALTPDFSGRMDLVEIVAKSGLDVFAHNVETVEELTPFVRDRRATYRQSLSVLKHVKKTCP-HLITKTSI 272
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIP5_YEAST (Lipoyl synthase, mitochondrial OS=Saccharomyces cerevisiae GN=LIP5 PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.179e-58 Identity = 113/201 (56.22%), Postives = 141/201 (70.15%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K IP G Y ++K ++EL L TVCEEA+CPN+GECW G + ATATIM+LGDTCTRGCRFC+VKT+R N AEAI WGL YVV+T+VDRDDL D G+ H A+TVRK+K+ PN L+E L DFRG+ V +A+ GL+V+AHN+ETVE L VRD RA ++QSL VL AK VP+ +T TSI Sbjct: 123 WLKVPIPKGTNYHKLKGDVKELGLSTVCEEARCPNIGECWGGKDKSKATATIMLLGDTCTRGCRFCSVKTNRTPSKPDPMEPENTAEAIKRWGLGYVVLTTVDRDDLVDGGANHLAETVRKIKQKAPNTLVETLSGDFRGDLKMVDIMAQCGLDVYAHNLETVESLTPHVRDRRATYRQSLSVLERAKATVPS-LITKTSI 322
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_HALSA (Probable lipoyl synthase OS=Halobacterium salinarium GN=lipA PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.126e-54 Identity = 100/184 (54.35%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVL 815 W+K P G+++ IK+ LR+ LHTVCEEA CPN+GECWSG + G TAT M++GD C+RGC FC+VKT NVAE++A GLDYVV+TSVDRDDL DQG+GHFA+T+R++KE P++L+E L+PDF+G V+++ +G +V AHNIETV Q VRD RA ++QSL VL Sbjct: 9 WLKMRPPSGERFTDIKETLRDNDLHTVCEEASCPNMGECWSGRD-GPGTATFMLMGDRCSRGCNFCDVKTG-GMEPLDPDEPANVAESVAEIGLDYVVLTSVDRDDLDDQGAGHFARTIREIKERDPSILVEVLIPDFQGEKSLVQKIIDAGPDVIAHNIETVARRQVPVRDRRAGYEQSLSVL 190
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_HALS3 (Probable lipoyl synthase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=lipA PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.126e-54 Identity = 100/184 (54.35%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVL 815 W+K P G+++ IK+ LR+ LHTVCEEA CPN+GECWSG + G TAT M++GD C+RGC FC+VKT NVAE++A GLDYVV+TSVDRDDL DQG+GHFA+T+R++KE P++L+E L+PDF+G V+++ +G +V AHNIETV Q VRD RA ++QSL VL Sbjct: 9 WLKMRPPSGERFTDIKETLRDNDLHTVCEEASCPNMGECWSGRD-GPGTATFMLMGDRCSRGCNFCDVKTG-GMEPLDPDEPANVAESVAEIGLDYVVLTSVDRDDLDDQGAGHFARTIREIKERDPSILVEVLIPDFQGEKSLVQKIIDAGPDVIAHNIETVARRQVPVRDRRAGYEQSLSVL 190
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_HALLT (Probable lipoyl synthase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=lipA PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.667e-53 Identity = 98/184 (53.26%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVL 815 W+K P G ++ +IK++LRE LHTVCEEA CPN+GECWSG + G TAT M++GD C+RGC FC+V+T NVA+A+A GLDYVV+TSVDRDDLAD GS HFA+T+R+++ P +L+E L+PDF+G+ + + +G +V AHN+ETVE LQ VRD RA+++QSL VL Sbjct: 10 WLKSRPPSGSRFTEIKERLRERDLHTVCEEANCPNMGECWSGRD-GPGTATFMLMGDRCSRGCNFCDVETG-GMKSLDSDEPENVADAVAEIGLDYVVLTSVDRDDLADGGSEHFAETIREIQRRDPEILVETLIPDFQGDPEAIDRIIDAGPDVIAHNVETVERLQWPVRDRRADYEQSLAVL 191
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_ANADE (Lipoyl synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=lipA PE=3 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.263e-52 Identity = 100/201 (49.75%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W++ ++PGG++Y ++++ L+ L+LHTVC EA CPN+ ECW GG TAT+M++GD CTRGCRFCNVKT+ ++A AIA GLDY+V+TSVDRDDL D G+ HFA +R+LKE+ P +L+E L PDFRG+ VR V ++ +VFA+N+ETV L AVRD +A + Q+L VL K P +T +SI Sbjct: 8 WLRVNVPGGERYQKVRETLKGLQLHTVCAEAHCPNVAECWGGG-----TATVMLMGDVCTRGCRFCNVKTAAHPPALDPDEPRHLAAAIAELGLDYIVVTSVDRDDLPDGGAAHFADAIRRLKEI-PGLLVEVLTPDFRGDPAAVRTVGRAAPDVFANNLETVRRLTPAVRDAKATYDQTLGVLAQMKREFPQ-VVTKSSI 201 The following BLAST results are available for this feature:
BLAST of FC878108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878108 ID=FC878108; Name=FC878108; organism=Citrus clementina; type=EST; length=866bpback to top |