FC878169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878169 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 7.116e-57 Identity = 104/122 (85.25%), Postives = 116/122 (95.08%), Query Frame = 2 Query: 557 MACVKLGSKTDAFQRQGQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGGAKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEYGDGNL 922 MAC+KLGSK+DAFQRQGQAWFCT+GLPSDIVVEVGEMSFHLHKFPLLSRSG MER IAEAS++ ++KC+I + D+PGG KTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEE+G+GNL Sbjct: 1 MACMKLGSKSDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVMERRIAEASKEGDDKCLIEISDLPGGDKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNL 122
BLAST of FC878169 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.596e-32 Identity = 65/116 (56.03%), Postives = 91/116 (78.45%), Query Frame = 2 Query: 575 GSKTDAFQRQGQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGGAKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEYGDGNL 922 G KTD F+ +GQ+WF + +PSD++V++G+M+FHLHK+PLLSRSG M RLI E+ + + I+ L D+PGG + FEL +KFCYGV ++LTA+N+ LRCAAE+LEMTE+ +GNL Sbjct: 32 GVKTDGFELRGQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRD--PDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNL 145
BLAST of FC878169 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.184e-27 Identity = 57/121 (47.11%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 581 KTDAFQRQGQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKC-------IINLLDIPGGAKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEYGDGNL 922 K D F R+ ++W+ S +PSD++V+VG+++F+LHK+P++SRSG M R + E+S E + ++ + D+PGGA +FEL A+F YG+ ++LTA+N+ LRCAAE+LEMTEE +GNL Sbjct: 32 KNDGFVRRDRSWYVNSDIPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAAAVAVVEMGDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNL 152
BLAST of FC878169 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.090e-24 Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 2 Query: 545 HRQKMACVKLGSKTDAFQRQGQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGGAKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEYGDGNL 922 H QK++ K RQ + + +PSDI +EV +F LHKFPL+SRSG + R++AE + K + LL++PGGA+TFEL AKFCYG+ E+T+SNV L C +++LEMTEEY NL Sbjct: 19 HHQKLSLAKSS-------RQSCSEWIFRDVPSDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISK--VELLNLPGGAETFELAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNL 135
BLAST of FC878169 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.655e-24 Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 2 Query: 566 VKLGSKTDAFQRQGQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGGAKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEYGDGNL 922 + + S + + R GQ W + +P+D+VVEVGE +F LHKF L+++S + +LI E+ + + INL DIPGG + FE AKFCYGV E+T NV L CAAE L+MT++Y D NL Sbjct: 9 INMNSMSSSLARTGQ-WVFSQDIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIMESKDSDVTR--INLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNNL 124 The following BLAST results are available for this feature:
BLAST of FC878169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878169 ID=FC878169; Name=FC878169; organism=Citrus clementina; type=EST; length=924bpback to top |