FC878245

Overview
NameFC878245
Unique NameFC878245
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length329
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878245 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.057e-13
Identity = 37/56 (66.07%), Postives = 39/56 (69.64%), Query Frame = 2 
Query:  152 HSSDYAPYPKIDPNDVAPPPQNWSNVSTATGPAPI-NESAATTMPAESNPYVSPSP 316
            HSSDYAPYPK+DP DV PPP           P PI   +AATTMPAESNPYVSPSP
Sbjct:   28 HSSDYAPYPKLDPTDVTPPP-----------PQPIPTGAAATTMPAESNPYVSPSP 72
The following BLAST results are available for this feature:
BLAST of FC878245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GEML1_ARATH8.057e-1366.07GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA1DE06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA1DE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878245 ID=FC878245; Name=FC878245; organism=Citrus clementina; type=EST; length=329bp
AGAATCCCCCAAAATTTTCGGTCCGAGTTCCGTTCGACGGATAATTTGTA
CTTAGAAAGAGTAAAAAAGGATGAATCCGCAACAAGCCGATCATCAAATT
GAAACCAAAGCTTCTTCAGAGACCCACCATATGCAGCAACAGCAAGAACC
TCACTCATCTGACTACGCTCCTTACCCTAAGATTGACCCAAACGACGTCG
CTCCACCTCCTCAAAATTGGTCGAACGTGTCCACGGCCACGGGGCCAGCG
CCTATCAACGAGAGTGCCGCCACCACCATGCCTGCAGAATCCAATCCCTA
CGTGTCCCCCTCTCCGATTGAGCCATCCT
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