FC878333

Overview
NameFC878333
Unique NameFC878333
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length909
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10517 contig Ccv1_Contig10517:1..909. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GL8D1_MOUSE (Glycosyltransferase 8 domain-containing protein 1 OS=Mus musculus GN=Glt8d1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.378e-20
Identity = 73/251 (29.08%), Postives = 111/251 (44.22%), Query Frame = 3
Query:  207 EPVHIAMTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALD-SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTK-----------YFSDEFWFDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIYE---LGSL--PPFLLVFGGDVEAIDHRWNHHGLG 908
            E + + +    + L GTIAA++SV  H +   NV F+ +   S+  +      +   +   + +++  F  K + G +     +     PL +AR YL  IL PS K+ IY+D DVIV  DI  L+  PL  G      E C +  TK           Y     +      ++      C FN GV V +L  W+  +   ++EKWM++  E  +Y     GS+  PP L+VF      ID  WN   LG
Sbjct:   64 EEIPVVIAASEDRLGGTIAAINSV--HQNTRSNVMFYIVTFNSTADHLRSWLNS--GSLKSIRYKIVNFDTKLLEGKVKQDPDQGESMKPLTFARFYLP-ILVPSAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVIIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLG 309          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GL8D1_XENTR (Glycosyltransferase 8 domain-containing protein 1 OS=Xenopus tropicalis GN=glt8d1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.009e-20
Identity = 78/279 (27.96%), Postives = 124/279 (44.44%), Query Frame = 3
Query:  135 ASVQFLEAPVYRNGLECPNLAANGEPVHIAMTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRS-----AFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKY--------FSDEFWFDREFSRVFE-GKR--PCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIYELG-----SLPPFLLVFGGDVEAIDHRWNHHGLG 908
            A + F      R+  E P     GE + + +    E L G +AA++S+  +T    NV F+ I        TND    +RS         +++++  F  + + G +          P+ +AR YL ++L P  K+ IYLD DVIV DDI+ L+  PL  G      + C +  +K+        ++   + D +  R+   G R   C FN GV V +L  WR  +  R++EKWM +     +Y        + PP L+VF      +D  W+   LG
Sbjct:   41 APLVFQRLEALRDAHESPPEERQGEEIAVVIPGVEERLGGLVAAINSISSNTK--SNVVFYIIT-------TNDTKGHIRSWLDGTGLKRVTYKLLAFDTRVLDGKVRVDAGAEPVKPMTFARFYLPNLL-PETKKAIYLDDDVIVQDDIRDLYNTPLRPGHAAAFSDDCDSVTSKFPVRGAANQYNYIGFLDYKKERIRSLGMRANTCSFNPGVFVANLTEWRRQNVTRQLEKWMELDVAEELYSKTLSASITAPPLLIVFYQRHSNLDPLWHVRHLG 309          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GL8D1_RAT (Glycosyltransferase 8 domain-containing protein 1 OS=Rattus norvegicus GN=Glt8d1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.839e-20
Identity = 71/251 (28.29%), Postives = 110/251 (43.82%), Query Frame = 3
Query:  207 EPVHIAMTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALD-SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTK-----------YFSDEFWFDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIYE---LGSL--PPFLLVFGGDVEAIDHRWNHHGLG 908
            E + + +    + L GTIAA++S+  H +   NV F+ +    +  +      +   +   + +++  F  K + G +     +     PL +AR YL  IL PS K+ IY+D DVIV  DI  L+  PL  G      E C +  TK           Y     +      ++      C FN GV V +L  W+  +   ++EKWM++  E  +Y     GS+  PP L+VF      ID  WN   LG
Sbjct:   64 EEIPVVIAASEDRLGGTIAAINSI--HQNTRSNVIFYIVTFNRTADHLRSWLNS--GSLKSIRYKIVNFDTKLLEGKVKEDPDQGESMKPLTFARFYLP-ILVPSAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVMIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLG 309          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GL8D1_BOVIN (Glycosyltransferase 8 domain-containing protein 1 OS=Bos taurus GN=GLT8D1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19
Identity = 72/251 (28.69%), Postives = 111/251 (44.22%), Query Frame = 3
Query:  207 EPVHIAMTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALD-SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKY--------FSDEFWFDREFSRVFE---GKRPCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIYE---LGSL--PPFLLVFGGDVEAIDHRWNHHGLG 908
            E + + +    + L G IAA++S+  +T    NV F+ +    +  +      +  S    + +++  F  K + G +     +     PL +AR YL  IL P  K+ IY+D DVIV  DI  L+  PL  G      E C +   K         ++   + D +  R+ E       C FN GV V +L  WR  +   ++EKWM++  E  +Y     GS+  PP L+VF      ID  WN   LG
Sbjct:   64 EEIPVVIAASEDRLGGAIAAINSIQHNTR--SNVIFYIVTLNGTADHLRSWLSS--SNLKRIRYKIVNFDTKLLEGKVKEDPDQGESIKPLTFARFYLP-ILVPRAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSTSAKVVIRGAGNQYNYIGYLDYKKERIRELSMKASTCSFNPGVFVANLTEWRRQNITNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLG 309          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GL8D1_XENLA (Glycosyltransferase 8 domain-containing protein 1 OS=Xenopus laevis GN=glt8d1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 72/255 (28.24%), Postives = 115/255 (45.10%), Query Frame = 3
Query:  201 NGEPVHIAMTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTN---DLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKY--------FSDEFWFDREFSRVFE---GKRPCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIYELG-----SLPPFLLVFGGDVEAIDHRWNHHGLG 908
            +GE + + +    E L G IA ++S+  +T    NV F+ I    +  + +   D     R A+  L+F   +   K      +  ++     P+ +AR YL  +L P  K+VIYLD DVIV DDI +L+  P+S G      E C +  +K+        ++   + D +  R+         C FN GV V +L  WR  +  R++EKWM +     +Y        + PP L+VF      I+  W+   LG
Sbjct:   61 HGEEIAVVIPGVEERLGGLIATINSISSNTK--SNVVFYIITTNDTKKHISSWLDGTDLKRVAYKLLTFDARVLDGKVRVDAGAEPVK-----PMTFARFYLPSLL-PGAKKVIYLDDDVIVQDDIVQLYNTPISPGHAAAFSEDCDSVTSKFPVRGGANQYNYIGFLDYKKERIRSLGIKANTCSFNPGVFVANLTEWRRQNITRQLEKWMELDVTEELYSKSLSGNIAAPPLLIVFYRLYSNINPLWHVRHLG 307          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GL8D1_HUMAN (Glycosyltransferase 8 domain-containing protein 1 OS=Homo sapiens GN=GLT8D1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.200e-18
Identity = 69/251 (27.49%), Postives = 109/251 (43.43%), Query Frame = 3
Query:  207 EPVHIAMTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALD-SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTK-----------YFSDEFWFDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIYE---LGSL--PPFLLVFGGDVEAIDHRWNHHGLG 908
            E + + +    + L G IAA++S+  +T    NV F+ +   ++  +      +   +   + +++  F  K + G +     +     PL +AR YL  IL PS K+ IY+D DVIV  DI  L+   L  G      E C +  TK           Y     +      ++      C FN GV V +L  W+  +   ++EKWM++  E  +Y     GS+  PP L+VF      ID  WN   LG
Sbjct:   64 EEIPVVIAASEDRLGGAIAAINSIQHNTR--SNVIFYIVTLNNTADHLRSWLNS--DSLKSIRYKIVNFDPKLLEGKVKEDPDQGESMKPLTFARFYLP-ILVPSAKKAIYMDDDVIVQGDILALYNTALKPGHAAAFSEDCDSASTKVVIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNITNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLG 309          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GLTR_ARATH (Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.743e-15
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 3
Query:  468 SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWFDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNHHGLG 908
            S LN+ R YL ++  P + ++++LD DV+V  D+  LW+I L G +  GA E C  +F +Y      F     +       C +  G+ + DL  WR      +   W  + ++R +++LG+LPP L+ F    +++D  W+  GLG
Sbjct:  363 SMLNHLRFYLPEMY-PKLNKILFLDDDVVVQKDVTGLWKINLDG-KVNGAVETCFGSFHRY-GQYLNFSHPLIKENFNPSACAWAFGMNIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLG 506          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: QUA1_ARATH (Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.624e-15
Identity = 45/147 (30.61%), Postives = 74/147 (50.34%), Query Frame = 3
Query:  468 SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWFDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNHHGLG 908
            S LN+ R YL ++  P + R+++LD DV+V  D+  LW I + G +  GA E C  +F +Y +    F     +     + C +  G+   DL  WR      +   W  + + R +++LG+LPP L+ F    + +D  W+  GLG
Sbjct:  361 SILNHLRFYLPEMY-PKLHRILFLDDDVVVQKDLTGLWEIDMDG-KVNGAVETCFGSFHRY-AQYMNFSHPLIKEKFNPKACAWAYGMNFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLG 504          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GL8D1_DANRE (Glycosyltransferase 8 domain-containing protein 1 OS=Danio rerio GN=glt8d1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 64/254 (25.20%), Postives = 110/254 (43.31%), Query Frame = 3
Query:  201 NGEPVHIAMTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTND-LAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALD-SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHA-----------NFTKYFSDEFWFDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIY-----ELGSLPPFLLVFGGDVEAIDHRWNHHGLG 908
            +GE + + +T   E L   + A++S+ +++    NV F+ +    S  + +  L++T       L  ++ +F    + G I +  ++     PL +AR Y+   L P  ++ IYLD DVIV  DI++L+   L  G      E C +           N   Y     +      ++      C FN GV V +L  W++ +   ++E WM    +  +Y     +  + PP L+VF      ID  WN   LG
Sbjct:   61 SGEEIPVLITAPEERLGAAVTAMNSIYRNSKA--NVVFNIVTLNESVVHLSTWLSKTD------LKHKIIVFDPSILLGKIPTDAQKMETVRPLTFARFYMPAFL-PDAEKAIYLDDDVIVQGDIRELFNTSLKSGHVAAFSEDCDSASSKGIVRGAGNQNSYIGYLDFKKEAIKKLGMRANTCSFNPGVFVANLTEWKQQNVTSQLEFWMERNAKEDLYSKTLADCMTTPPMLIVFYKHHSNIDPMWNVRHLG 305          
BLAST of FC878333 vs. ExPASy Swiss-Prot
Match: GL8D2_HUMAN (Glycosyltransferase 8 domain-containing protein 2 OS=Homo sapiens GN=GLT8D2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14
Identity = 61/235 (25.96%), Postives = 105/235 (44.68%), Query Frame = 3
Query:  255 TIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLIS-SSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWFDREFSRVFEGKRP-----------CYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIY--ELG---SLPPFLLVFGGDVEAIDHRWNHHGLG 908
            T+AA++S+  +T    N+ F+ +   ++        +   S    ++F++  F    + G I   S R  L  PLN+ R YL  ++    ++VIYLD DVIV  DIQ+L+   L+ G      + C     +  +        +    + ++            C FN GV+V ++  W+     +++EKWM+   E  +Y   LG   +  P L+VF G    I+  W+   LG
Sbjct:   65 TMAAINSIYSNTDA--NILFYVVGLRNTLTRIRKWIE--HSKLREINFKIVEFNPMVLKGKIRPDSSRPELLQPLNFVRFYLPLLIHQH-EKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSAQDINRLVGLQNTYMGYLDYRKKAIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSTINPLWHIRHLG 294          
The following BLAST results are available for this feature:
BLAST of FC878333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
GL8D1_MOUSE1.378e-2029.08Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_XENTR4.009e-2027.96Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_RAT6.839e-2028.29Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_BOVIN4.433e-1928.69Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_XENLA9.875e-1928.24Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_HUMAN2.200e-1827.49Glycosyltransferase 8 domain-containing protein 1 ... [more]
GLTR_ARATH1.743e-1530.61Uncharacterized glycosyltransferase At3g02350 OS=A... [more]
QUA1_ARATH6.624e-1530.61Glycosyltransferase QUASIMODO1 OS=Arabidopsis thal... [more]
GL8D1_DANRE1.130e-1425.20Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D2_HUMAN5.608e-1425.96Glycosyltransferase 8 domain-containing protein 2 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA91BA06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA91BA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878333 ID=FC878333; Name=FC878333; organism=Citrus clementina; type=EST; length=909bp
CGACATTGATCTTTGCTGCGCATTCGATAATAATGTTTCGTCCAAGATAG
GTTTTCCCATTAATCTTGTTCGTAAGTTCCCTCGTGTTCTTGTCCGTGGA
TGCTGTCAGATCGTTTCCGAGGATTAAATTCGATGCTTCCGTGCAATTTC
TAGAGGCGCCGGTGTATCGAAACGGCCTGGAGTGTCCGAATCTGGCCGCA
AATGGCGAGCCTGTTCACATTGCGATGACACTTGATCCCGAGTACTTGAG
GGGCACCATTGCTGCAGTTCATTCGGTTCTCAAACACACTTCTTGCCCGG
AAAACGTTTTCTTTCACTTCATCGCCGCGGAGTCAAGTCCGGCGAACACA
AATGACCTGGCACAGACTGTCCGGTCTGCATTCCCTTATTTGAGCTTCCA
AGTTTATCTGTTCCGAGAAAAATTCGTCACCGGTTTGATCTCGTCTTCTA
TCCGCCGTGCTCTTGACAGCCCCTTGAATTATGCGAGAATTTACTTAGCT
GACATACTTGAGCCTTCTATCAAACGCGTAATCTACCTCGACTCGGATGT
CATTGTTGTCGATGATATACAGAAACTCTGGAGGATTCCCCTATCTGGGG
GAAGAACAATCGGAGCTCCAGAGTACTGTCATGCGAATTTCACCAAGTAT
TTCTCCGATGAGTTCTGGTTCGACCGCGAGTTTTCCAGGGTTTTCGAAGG
GAAGAGACCTTGCTACTTCAATACAGGAGTGATGGTCATGGATTTGGTGA
GATGGAGGGAGGGTGATTATATGAGGAAGATTGAGAAATGGATGAGGATT
CAAAAGGAGAGGAGGATTTATGAGCTGGGATCTCTTCCGCCATTTTTGTT
AGTGTTTGGGGGAGATGTGGAGGCCATTGATCACAGATGGAATCACCACG
GGCTTGGAG
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