FC878349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878349 vs. ExPASy Swiss-Prot
Match: Y4466_ARATH (ZF-HD homeobox protein At4g24660 OS=Arabidopsis thaliana GN=At4g24660 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.826e-37 Identity = 89/219 (40.64%), Postives = 120/219 (54.79%), Query Frame = 3 Query: 102 VSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPNAAATHRLPPAATASHSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYYSSAPHMLLALSTGFSAPPDDGDDNXXXXXXXXXXXXXFNQVLAANSSDNGKKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKNASGRK 758 + Y+ECLKNHA ++GGHA+DGC EFMPS + D +L CAACGCHRNFHR++ E HR+P ++ P PQ HQP P + ++P + + P GD+ +SS KR RTKFT EQKEKML+FAERLGW++ + ++ + FC+E GV R+V K+WMHNNKN+ G+K Sbjct: 47 IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLD--ALKCAACGCHRNFHRKET-ESIGGRAHRVP-----TYYNRP------------PQPHQP-----PGYLHLTSP------AAPYRPPAASGDEEDTSNP---------------SSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKK 219
BLAST of FC878349 vs. ExPASy Swiss-Prot
Match: Y5541_ARATH (ZF-HD homeobox protein At5g65410 OS=Arabidopsis thaliana GN=At5g65410 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.330e-36 Identity = 86/220 (39.09%), Postives = 119/220 (54.09%), Query Frame = 3 Query: 108 YKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRD-PYEPNAAATHRLPPAATASHSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYY---SSAPHMLLALSTGFSAPPDDGDDNXXXXXXXXXXXXXFNQVLAANSSDNGKKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKNASGR 755 ++ECLKN A ++GGHA+DGCGEFMP+ + D +L CAACGCHRNFHR++ PY +A H+ PP + P P SY S AP + LAL PP + + + +A + +KR RTKFT EQKE+ML+ AER+GW++ R ++++ Q FC E GV R+V KVW+HNNK+ G+ Sbjct: 75 FRECLKNQAVNIGGHAVDGCGEFMPAGIEGTID--ALKCAACGCHRNFHRKELPYFHHAPPQHQPPPPPPGFYRL-----------------------PAPVSYRPPPSQAPPLQLAL------PPPQRERSEDPM-----------ETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQVLKVWLHNNKHTLGK 252 The following BLAST results are available for this feature:
BLAST of FC878349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878349 ID=FC878349; Name=FC878349; organism=Citrus clementina; type=EST; length=926bpback to top |