FC878394

Overview
NameFC878394
Unique NameFC878394
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878394 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.234e-25
Identity = 61/170 (35.88%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   74 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTNHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAKDVFDAMKAMSKPAFRDLL--ISLGEETEQRQRPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIYFHLPKLIEDGHIPFLGDMF 577
            PHVV +PYP QGHI PMM +A+LL +  F VTFVNT +NH+  LR+   ++  +  P+F+F SI  GLP   + +      + ++        FR+LL  I+ G+        +C+++DG + F TLDV+EEL +P +   T +      Y H    IE G  P   + +
Sbjct:   12 PHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRG-SNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPP---VSCIVSDGCMSF-TLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESY 176          

HSP 2 Score: 38.5058 bits (88), Expect = 2.234e-25
Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 3
Query:  654 DKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF-EIEAPVVSLLGS 854
            D  +  IP  +N ++ +D+P   R  T+ DD ++ F + ET    RASA+ILNTF ++E  VV  + S
Sbjct:  184 DTVIDFIPTMKN-VKLKDIPSFIRT-TNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAMQS 249          
BLAST of FC878394 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.330e-23
Identity = 57/168 (33.93%), Postives = 86/168 (51.19%), Query Frame = 2
Query:   74 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTNHNHDLLLR---NTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAKDVFDAMKAMSKPAFRDLLISLGEETEQRQRP--TCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIYFHLPKLIEDGHIPF 562
            PHVVL+P+P QGH+ P+M LA LL +   +VTFV T +N+  LLR      +         F+   I  GL  +V ++ +    + D+++      FR LL  LG+E E +  P  TCV+ D ++ F     + E  IP +   T +A     Y H  +L+E G +PF
Sbjct:   11 PHVVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSARFRIEVIDDGLSLSVPQNDVGG--LVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTCVVGDVVMTFAAA-AAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPF 175          

HSP 2 Score: 45.4394 bits (106), Expect = 3.330e-23
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 3
Query:  630 SLIADEN-MDKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNT-FEIEAPVVSLLGSHF 860
            SL+AD++ +D P+  +PG  + +R RD+P  CR  T  DD ++   + +  +   + ALILNT +E+E  VV  L + F
Sbjct:  179 SLLADDDYLDTPLEWVPGMSH-MRLRDMPTFCRT-TDPDDVMVSATLQQMESAAGSKALILNTLYELEKDVVDALAAFF 255          
BLAST of FC878394 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13
Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = 2
Query:   53 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTNHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAKDVFDAMKAMSKPAFRDLLISLGEETEQRQRPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIYFHLPKLIEDGHIP 559
            ME       V+L P PLQG I PM+ LA +L    F +T ++T  N              +  P F F  IP GL    I+ G+ +  +   +   ++  FRD L  +  E+++ +R TC+I D    F T  VSE L++P L L T  A++   Y  LP +   G++P
Sbjct:    1 MEEKRNGLRVILFPLPLQGCINPMLQLANILHVRGFSITVIHTRFN----------APKASSHPLFTFLQIPDGLSETEIQDGVMS--LLAQINLNAESPFRDCLRKVLLESKESERVTCLIDDCGWLF-TQSVSESLKLPRLVLCTFKATFFNAYPSLPLIRTKGYLP 156          
The following BLAST results are available for this feature:
BLAST of FC878394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
COGT2_ARATH2.234e-2535.88Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI3.330e-2333.93Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
CNGT2_ARATH1.970e-1331.95Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA53BG11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA53BG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878394 ID=FC878394; Name=FC878394; organism=Citrus clementina; type=EST; length=867bp
CACATTTGCAGCAATACTGTGATCTTTCTTCCAACAAGAGAACATGATTA
GAATGGAGCGATCACATGTTAATCCTCACGTAGTGCTCCTGCCCTACCCT
TTACAAGGCCACATCAAACCCATGATGAGTCTAGCGGAGCTTCTTGGCAG
TGCAAATTTTCAAGTCACCTTCGTAAACACTAATCACAACCACGACCTTC
TTCTTCGCAACACCGACATAACTTCATTCTGCAATCGATTCCCTAATTTC
CAGTTCAGGTCCATCCCTAGCGGTCTTCCCGCCAATGTGATACGTTCCGG
CTTAACTGCCAAAGATGTATTTGACGCCATGAAGGCGATGAGCAAGCCGG
CGTTCCGGGATCTGTTGATTTCACTCGGTGAAGAGACCGAGCAGCGCCAG
CGCCCAACATGTGTTATAGCAGATGGTATCCTGTGTTTCTTGACTCTCGA
TGTTTCGGAGGAGCTTCAAATTCCACTCCTCGCTCTAAGAACTCACAATG
CTTCTTACTCTTGGATTTACTTCCACCTTCCCAAGCTCATTGAGGATGGC
CATATCCCATTTCTAGGTGATATGTTTTCGGAGGATTTTTAATTTGTTTT
CCGTTTTCGGTTATTTACATAAAATTTATTCATTAATTGCAGATGAAAAC
ATGGACAAACCCGTTGCAGGCATTCCAGGATTTGAAAATTTTCTTCGAAA
TAGAGATCTTCCAGGAACTTGCAGAGTCAAAACAAGCGACGATGATTATC
TTTTGCAGTTCTTCATCGGAGAAACCTTTGCCATGACTCGAGCTTCTGCC
CTCATTCTCAACACCTTTGAAATCGAAGCCCCCGTAGTTTCTCTACTTGG
CTCTCATTTTACAAAGA
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