FC878402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 458.373 bits (1178), Expect = 2.519e-128 Identity = 212/244 (86.89%), Postives = 229/244 (93.85%), Query Frame = 2 Query: 158 VVTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 +V V+QDG+G Y +VQ+AID VPL NTCRT+IR+SPG+YRQPVYVPK KN IT AG PE TVLTWNNTA+KIEHHQA+RVIGTGTFGCGSVIVEGEDF+AENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLH+GKQYLKDCYIEGSVDFIFGNSTAL+EHCHIHCKSQGFITAQSRKSSQE+TGYVFLRCVITGNG +GYMYLGRPWGPFGRVV A+TYMD CIR+V WHNW Sbjct: 6 MVRVSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSSQESTGYVFLRCVITGNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNW 249
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.782e-57 Identity = 115/242 (47.52%), Postives = 150/242 (61.98%), Query Frame = 2 Query: 185 GHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEG-----SGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ--GFITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 G + +Q+AID +PL N R +I++ GVY++ V +P K IT+ G E T + W +TA + ++ GT+ S V FVA+NITF N+ P QAVA+RV+AD AF+ CR LG QDTLY H G+ Y KDCYIEGSVDFIFGN+ +L E CH+H + G +TAQ R S E TG+ F++C +T GTG +YLGR WGPF RVVFA+TYMD I W+NW Sbjct: 94 GDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPD----SKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLEDTGFSFVKCKVT---GTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNW 328
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 1.198e-45 Identity = 105/256 (41.02%), Postives = 143/256 (55.86%), Query Frame = 2 Query: 167 VAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAP-----EGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS----------QGFITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 V ++G ++ TVQ A+D V + R +I I+ G+Y + V +PKTK ITL G+ + T + WN+TA GTF C +V V G FVA+NI+F N AP + QAVAIR+ D AF C F G QDTL+ G+ Y KDCYI+GS+DFIFGN+ +L + C I + G +TA R S E +G+ F+ C I GGTG+++LGR W P+ RVVF T M I W+N+ Sbjct: 93 VDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYS----------ANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTI---GGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNF 335
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.668e-45 Identity = 98/251 (39.04%), Postives = 141/251 (56.18%), Query Frame = 2 Query: 158 VVTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEG-----SGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ--GFITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 V+TV+ +G +R+VQ+A+D +P N I+I+PG YR+ V VP TK IT G + T + W++ A+ + A T+ SV V F A NI+F N+AP QAVA R++ D+ F C F G QDTL G+ Y K+CYIEGS+DFIFGN ++ + C +H + G I A R +E TG+ F+ C +T GTG +Y+GR G + R+V+A+TY D + H W +W Sbjct: 60 VITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDL----GANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRTCPEEKTGFAFVGCRVT---GTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDW 303
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.950e-44 Identity = 100/247 (40.49%), Postives = 143/247 (57.89%), Query Frame = 2 Query: 158 VVTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPE----GSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGF--ITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXW 880 ++TV Q G +++T+ EAI +P N R +I+++PGVY + V + + ITL G+ TVLT++ TA + GT ++IV E F A ++T +N+AP GQA+A+R+ AD+ AFY+CRF G+QDTL G + KDCYIEG+ DFIFG +L + +H G ITAQ R+S+ E GY F+ C +TG GTG +YLGR W +VV+AFT M + W Sbjct: 66 IITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQY-----------GTVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAVGDGLRVITAQGRQSATEQNGYTFVHCKVTGT-GTG-IYLGRSWMSHPKVVYAFTEMTSVVNPSGW 299
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44 Identity = 102/258 (39.53%), Postives = 146/258 (56.59%), Query Frame = 2 Query: 152 SCVVTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPE-----GSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ-------GFITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 S V+TV G G++ VQ AID VP ++ +TLI ++ G YR+ V V + K + + GR +NT + WN+TA + T S +V +F A NI+F+N+APE QAVA+R+ D+ AFY C F G QDTL G+ + K+C+I+GS+DFIFGN +L + C I+ ++ G ITAQ R+S E +G+ F+ C I G+G + LGR WG + VVF+ TYM I W+NW Sbjct: 88 SLVLTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGN----------TADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNW 332
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44 Identity = 107/291 (36.77%), Postives = 158/291 (54.30%), Query Frame = 2 Query: 41 YTFLFKFIFGCVISQQSIPSPPARCGCVSFFLVLKMASCVVTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGS-----GQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ----GFITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHN 886 + LF I + S P++C +S F K + V+ V+ +G G ++ VQ+AID + +TLI I G+YR+ V + KN + + G T + WNNT GTF SV V GE F A NI+F+N+AP + QAVA++V D+ AFY C F G QDTL G+ + K C+IEGS+DFIFGN +L E C +H ++ G ITA + + ++ TG+VF+ C IT G+ ++LGR W P+ RV+F+ TYM + + W++ Sbjct: 3 FFILFLSIISPIESVDQRIHHPSKCDHLSKFPT-KGFTMVLKVSLNGCGRFKRVQDAIDASIGSSQSKTLILIDFGIYRERFIVHENKNNLVVQGMGYSRTSIEWNNTTAS----------SNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKENTIGCITANGKDTLKDRTGFVFVNCKIT---GSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWND 279
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44 Identity = 96/248 (38.71%), Postives = 139/248 (56.05%), Query Frame = 2 Query: 158 VVTVAQDGTGHYRTVQEAIDRVP--LCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS--QGFITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 ++ V Q G G + +QEAI+ +P L N+ I + PG+YR+ V +P K ITL+G NT L W++ G ++ + DFV +T +N +G+AVA+RV AD+ AFY C +QDTL G Y K+CYIEG+ DFI G++++L E CH+H S G ITAQ R S+ E +G+ FL C +TG+G T +LGRPWG + RVVFA+++ + W+ W Sbjct: 50 LIRVDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWSD--------------GEDILESPTLTIFASDFVCRFLTIQNKFGT-AGRAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGSITAQMRTSATEKSGFTFLGCKLTGSGST---FLGRPWGAYSRVVFAYSFFSNVVAPQGWNQW 279
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.262e-43 Identity = 103/252 (40.87%), Postives = 142/252 (56.35%), Query Frame = 2 Query: 158 VVTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGR--CPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENS----APEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIH--CKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 V+ V ++G G TVQ A+D VP N+ R I I PG+YR+ V VPK+K I+ G +TV++W++ A+ + GT+ SV +E + F A ITFEN+ A E QAVA+R+ D+ FY R LG QDTL+ G Y CYI+G+VDFIFGN+ +L + C IH K G I A R S E TG+ F+ C I+ GTG +YLGR WG + R V++ ++ I V W +W Sbjct: 81 VIVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKE----LGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYGAIAAHHRDSETEDTGFSFVNCDIS---GTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDW 325
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 8.034e-42 Identity = 97/245 (39.59%), Postives = 143/245 (58.37%), Query Frame = 2 Query: 167 VAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSG-----QAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGF--ITAQSRKSSQETTGYVFLRCVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXW 880 V Q+G GH++T+ EAI+ V NT R +I+I PGVY++ V + ++K ITL G VLT++ TA + GT ++IV + F+A NI +NSAP G QA+++R++ ++ AFYNC+F G+QDT+ G + KDCYIEG+ DFIFG+ +L ++ G ITA + KS+ E +GY F+ C +TG GTG +YLGR W +VV+A+T M + W Sbjct: 45 VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQY-----------GTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGIRVITAHAGKSAAEKSGYSFVHCKVTGT-GTG-IYLGRSWMSHPKVVYAYTDMSSVVNPSGW 276 The following BLAST results are available for this feature:
BLAST of FC878402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878402 ID=FC878402; Name=FC878402; organism=Citrus clementina; type=EST; length=891bpback to top |