FC878413

Overview
NameFC878413
Unique NameFC878413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:35..952. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.187e-41
Identity = 94/256 (36.72%), Postives = 141/256 (55.08%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC--GLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLDV 916
            IIG+LH       PH+S   LA +LGP+  + LG +P ++VS+ E+A+++LKTHD +FASRPS  +A+ +     DV FSP G YWRQ RKICV ELLS KRVNS++ + +EEV   M R+   C  G   ++S+L+    +      AFG ++   E E ++    A +  E+  L+  F+ GD+F  + W   LTG   R+ +    L   VD + D     ++  G+        +D +DVL  ++K   L V
Sbjct:   40 IIGNLHQL--GNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKY---EGEEERKNKFADLATELTTLMGAFFVGDYFPSFAWVDVLTGMDARLKRNHGELDAFVDHVIDDHLLSRKANGSDGV---EQKDLVDVLLHLQKDSSLGV 287          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.906e-34
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 2
Query:  158 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKK 898
            IG+LH       PH+S   L+ K GP+ ++QLG +P +VVSS E+A+++ K HD VF+ RPS+ +A  +  G + V+F+P G YWR+ RKI + ELLSPKRV SF+ V  EEV   +  +    G   ++S+L  +   +  C  A G R     D+  K   ++ +  E + +L GF+  DFF    W    +G   R+ K  R + N  D++  +         +GA     +ED +DVL RV+K
Sbjct:   43 IGNLHQL--GTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYG-STVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTIALSHG-PVNLSELTLSLTNNIVCRIALGKRNRSGADDANK---VSEMLKETQAMLGGFFPVDFFPRLGWLNKFSGLENRLEKIFREMDNFYDQVIKEHIADNSSERSGA----EHEDVVDVLLRVQK 278          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.350e-31
Identity = 86/256 (33.59%), Postives = 133/256 (51.95%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE--TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGW----LTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSD 904
            IIG+LH   +   PH++  KL++K GP+ ++ LGRVP VVVSS + A+QVL+ HD    +RPS+   + +S    D+ FSP   YW++ RK+CV EL S K+V+S + + DEEV + +  +      +   ++++          C  AFGV F   E     S     +  E  E+L  F   DF     + GW    LTG   R  +  R+L    +++FD   + K+          GNEDF+D+L R++K +
Sbjct:   39 IIGNLHQIGE--LPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRTAFGVSF---EGTVLNSDRFNKIVREALEMLGSFSAADFIP---YVGWIIDVLTGLQGRRERSKRDLNAFFEQMFDLHKEGKK---------EGNEDFVDLLLRLEKEE 277          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.763e-31
Identity = 89/239 (37.24%), Postives = 120/239 (50.21%), Query Frame = 2
Query:  194 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFD---KTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKS 901
            PH+    LA+K GP+ ++QLG V  ++VSS E AK+V+KTHD  FASRP  L    V  G  D+ FSP G YWRQ RKIC  ELLS KRV S   + +EEV   + R+ +  G   ++S  I +        +AFG R+ME E+         S   EV +L  GF   D F    W   LT    +     + +   ++ I D     S+ K+    G     G ED IDVL + + S
Sbjct:   40 PHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVNLSQAIDSLIFTITSRSAFGKRYMEQEE-------FISCVREVMKLAGGFNIADLFPSAKWLENLTRMRSKFEYLHQKMDRILETIIDDHKANSRTKEGQVEG-----GEEDLIDVLLKYENS 266          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.928e-31
Identity = 83/241 (34.44%), Postives = 121/241 (50.21%), Query Frame = 2
Query:  194 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKA--RCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDL 910
            PH+    LAEK GP+ ++QLG V AVVV+S E+AKQVLKTHD  FASRP +L+   +     D+ FSP G YWRQ RKIC+ E+LS K V SF  +  +EV R +  ++     G   + ++ I  F +   C +AFG    E E           +  EV  L  GF   D F  + +     G   +++   R + + V+++  +  K      +   +  G ED +D L R+     L
Sbjct:   52 PHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERIIWFTSSMTCRSAFGQVLKEQE-------VFIKLIREVISLAEGFDVADIFPSYKFLHGFGGAKQKLLNAHRKVDSIVEDVIKEHKKNLATRKSDDAI--GGEDLVDALVRLMNDKSL 283          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.700e-31
Identity = 87/256 (33.98%), Postives = 133/256 (51.95%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPG----WLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSD 904
            IIG+LH   +   PH+S  KL++K GP+  ++LGRVP V+VSS E AKQ LK HD    SRP    A+ +S    D+ FSP   YW++ RK+ V EL S K+V+S + + DEEV + +  +      +T  +++  + A      C  AF V F   E     S+   ++  E  E+L  F   DF     + G     LTG   R  +  R+L    +++FD   ++K+          G+EDF+D+L R++K +
Sbjct:   40 IIGNLHQLGE--LPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRTAFSVNF---EGTVLNSERFNNIVREALEMLGSFSASDFIP---YVGRIIDLLTGLQGRRERSMRDLDAFYEQMFDLHKQKKE---------EGSEDFVDLLLRLEKEE 278          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.700e-31
Identity = 81/250 (32.40%), Postives = 128/250 (51.20%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV-KARCGLETD-MSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKK 898
            +IG+LH       PH+S   L+ + GP+  +  GRVP +VVSS E A ++LKTHD  FA+RP   +   +  G  DV F P G YWRQ + +C+  LL+ K V SF+ V +EEVN  M ++ KA C    + +S+L     +D     + G ++ EDE  G   K +     ++ ELL  F  GD+     W   + G+  ++++ SR    A  ++ +K  +     G          DF+++L  ++K
Sbjct:   42 VIGNLHQL--SLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRVSLGKKYWEDETAGGLKKRVR----QIMELLREFPIGDYVPALAWIDRINGFNSKIVEVSR----AYSDLMEKVVQEHLEAG------EHKADFVNILLSIEK 275          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.493e-30
Identity = 80/251 (31.87%), Postives = 127/251 (50.60%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNE---DFIDVLRRVKK 898
            +IG+LH     R PH+S   L+ + GP+  +  GRVP +VVSS ELA+ VLKTHD+VFASRP     + +     DV  +P G YWRQ + +CV  L S K V SF+ V +EE++  M +++    L  ++S ++ +   D  C  A G ++  + D          +   + +LL  F  G +     W  W+ G   ++ K +    N VD+ F++  +           + GN    DF+DVL  +++
Sbjct:   40 LIGNLHQL--GRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVNLSKILVSLTNDVICKVALGRKYGGETD-------FKELMERLNKLLGTFSVGSYVPWLAWIDWIRGLDCQLEKTA----NDVDKFFERVVQDH---------VDGNRDMTDFVDVLLAIQR 268          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.493e-30
Identity = 79/248 (31.85%), Postives = 128/248 (51.61%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKK 898
            +IG+LH     R  H+S   L+ + GP+  + LGRVP ++VSS ++A+++LKTHDQ FA+RP    ++ +     DV  +P G YWRQ + +CV  LLS K V SF+ V +EE+   M++++    L  ++S ++     D  C  A G ++  + D  + +  L+       ELL  F  G F     W  W+ G+  ++ K  ++L    D+ F+K  +  +             D ID L RVK+
Sbjct:   39 LIGNLHQL--GRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFNVSKVLECLTNDVICRVALGRKYGGETDFKKLTDRLS-------ELLGTFSIGSFVPWLAWVDWIRGWDAQLDKMGKDL----DDFFEKVVQDHEDGDR-----RDGTDLIDALLRVKR 268          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.493e-30
Identity = 81/252 (32.14%), Postives = 129/252 (51.19%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDL 910
            +IG+LH       PH+S   L+ + GP+  + LGRVP +VVSS ++A+ +LKTHD+VFASRP     + +     DV F+P G YWRQ + +CV  LLS K V SF+ V  EE++  M +++    L+ ++S+L+ +   D     A G ++  + D  +  K L         L+  F  G +     W  W++G   ++ K      N +DE  +K  +     G G        DF+DVL R+++   +
Sbjct:   41 LIGNLHQL--GHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVNVSELLGSLTNDVISRIALGRKYSGETDSKELMKRLMM-------LMGEFSVGTYVPWLGWIDWISGLDGQLNKTG----NDLDEFLEKVVQDHVD-GDGQ-----RTDFVDVLLRIQREKSI 273          
The following BLAST results are available for this feature:
BLAST of FC878413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
C71A1_PERAE4.187e-4136.72Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71A9_SOYBN2.906e-3435.63Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71BW_ARATH1.350e-3133.59Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA1.763e-3137.24Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D7_SOLCH3.928e-3134.44Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BV_ARATH6.700e-3133.98Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH6.700e-3132.40Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH1.493e-3031.87Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH1.493e-3031.85Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH1.493e-3032.14Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA49BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878413 ID=FC878413; Name=FC878413; organism=Citrus clementina; type=EST; length=918bp
AGGAAATTAAGTTGAGGGACTAATGGCCAACTTTAGCCCCGAAATCCTCT
TTCTGTCATTCGTTGTCTCGACGGCAATCCTCTACATGATTAATAATCGG
CGAAGGTCACTGCCAAATTCACCGTCACTGCCGTCACCACCAAACAAACT
TCCGATAATAGGTCACCTTCATCTCTTCTACAAAGAGCGCAAGCCACATA
AAAGTTTCGCTAAACTCGCAGAGAAGCTGGGTCCCATATTTTACATCCAG
CTCGGCCGAGTCCCCGCCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACA
AGTTCTCAAAACTCACGACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCA
GCGCCAAGCACGTCTCCGTCGGCCCCGCTGACGTCACCTTCTCCCCCAAC
GGCCCTTACTGGCGCCAAGCTCGCAAGATCTGCGTCACCGAGTTACTCAG
CCCAAAACGAGTCAACTCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACC
GGTTTATGAGCCGCGTGAAAGCCCGCTGTGGGTTAGAAACAGACATGAGT
GATCTTATTTTCGCCTTCTGTACTGATTTCTTTTGCCTTGCAGCATTTGG
GGTGAGGTTCATGGAAGATGAAGACGAAGGGCAAAAGAGTAAATACTTGG
CGAGTGTTTTCATAGAGGTTGAAGAGTTGCTGACAGGGTTTTATTATGGG
GATTTTTTCTCGGAGTGGGTTTGGCCCGGCTGGCTCACTGGGTACACACC
TAGGGTGATCAAGGGTTCTCGGAACTTGTTGAATGCTGTTGATGAGATTT
TCGATAAGACTTCCAAGAGGAAGCAGCCGCTGGGTACCGGCGCATTCTTA
TTGCACGGTAATGAAGATTTTATTGATGTTTTGCGTAGAGTCAAAAAAAG
CGACGATTTGGATGTGCC
back to top