FC878416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878416 vs. ExPASy Swiss-Prot
Match: STLP2_ARATH (SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4) HSP 1 Score: 242.276 bits (617), Expect = 2.980e-63 Identity = 137/303 (45.21%), Postives = 190/303 (62.71%), Query Frame = 3 Query: 15 SRNEESHNLQKYGVPLYGAGWVPYDQVIRSTHXXXXXXXXXXXXXXXHGSKDEAVADKSDDIRRNYYVVLXXXXXXXNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGP-GRVWDLASSAVATPLAKENDELFASCXFSPLNNEDYVLYIAAITDRGASIVTWNTTL-GRDSHKQVVREPVSSF 917 + + N+Q YGVP+Y A W+P + +RS S+D+ + S R+ +VL SGI N +L+ D +NSLS+QP+ L SDLPYRMA+HP G+ICAL NSC+LF W+++ + E + G SE+V+ +L +VGQQLAL F+ EG++ AAG+E+G LRVFKWPS+ +LNES+AH+SVK L+FS G+FLVSLG GP RVWD+ +SA L+KE DE+FASC FS + + VLYIAA T+RG SI+T +T L R K + + +S+F Sbjct: 6 TETNQPSNMQTYGVPIYAADWIP-EVDVRSK-----------IIMDPEKSEDDDESSSSSSSSRSC-IVLSGGGGEGRSGISNVILICRVDLNTNSLSEQPLGRLVVGSDLPYRMAVHPREGGLICALPNSCKLFHWEDIMSREDNQAGE--SEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLG--GPVCRVWDVNASAAVASLSKEKDEMFASCRFSVDSAGNEVLYIAANTERGGSIITCDTKLWKRKWSKPIKKNSISAF 291
BLAST of FC878416 vs. ExPASy Swiss-Prot
Match: PHF1_ARATH (SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.821e-21 Identity = 61/196 (31.12%), Postives = 97/196 (49.49%), Query Frame = 3 Query: 213 YVVLXXXXXXXNSGIRNAVLLSHFDF--ASNSLSDQPVAE--LRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCXFS 785 +V++ S + + LL+ F F + SLS P+A L+ P +++HP GD +C+ + C+LFE G+ I K L L+N G Q + F +G+ A G +G LR+ +WP+L +IL+E +AH S++D+ FS D +FL + G R+W + L + DE C FS Sbjct: 27 WVLIAKASKRRGSSVSSPALLNIFSFDPITASLSSSPLATHTLKDSDGDPVAVSVHPGGDYFVCSTSKGGCKLFELVGGAT------GITILAKELLPLQNAGLQKCMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARIWKAEDGFPLSTLERSGDENIELCRFS 216 The following BLAST results are available for this feature:
BLAST of FC878416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878416 ID=FC878416; Name=FC878416; organism=Citrus clementina; type=EST; length=917bpback to top |