FC878459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F3_MOUSE (Transcription factor E2F3 OS=Mus musculus GN=E2f3 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22 Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 3 Query: 537 TPAGSCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGLDNSIPGEVDADASILQADI 812 +P+ RYD+SLGLLTKKFI L+ + DG+LDLNKAAE L+VQKRRIYDITNVLEGI LI+KK KN ++W G S G + A L ++ Sbjct: 164 SPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLAQCQGLSKEV 255
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F3_HUMAN (Transcription factor E2F3 OS=Homo sapiens GN=E2F3 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22 Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 3 Query: 537 TPAGSCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGLDNSIPGEVDADASILQADI 812 +P+ RYD+SLGLLTKKFI L+ + DG+LDLNKAAE L+VQKRRIYDITNVLEGI LI+KK KN ++W G S G + A L ++ Sbjct: 172 SPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLAQCQGLSKEV 263
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F2_HUMAN (Transcription factor E2F2 OS=Homo sapiens GN=E2F2 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22 Identity = 55/81 (67.90%), Postives = 61/81 (75.31%), Query Frame = 3 Query: 519 GSPSALTPAG---SCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKG 752 G PS TP RYD+SLGLLTKKFI L+ +EDG+LDLN AAE L+VQKRRIYDITNVLEGI LI KK KN I+W G Sbjct: 114 GLPSPKTPKSPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDVQKRRIYDITNVLEGIQLIRKKAKNNIQWVG 194
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F2_MOUSE (Transcription factor E2F2 OS=Mus musculus GN=E2f2 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22 Identity = 55/81 (67.90%), Postives = 61/81 (75.31%), Query Frame = 3 Query: 519 GSPSALTPAG---SCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKG 752 G PS TP RYD+SLGLLTKKFI L+ +EDG+LDLN AAE L+VQKRRIYDITNVLEGI LI KK KN I+W G Sbjct: 116 GLPSPKTPKSPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDVQKRRIYDITNVLEGIQLIRKKSKNNIQWVG 196
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F5_MOUSE (Transcription factor E2F5 OS=Mus musculus GN=E2f5 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.944e-21 Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 3 Query: 525 PSALTPAGSCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEV-QKRRIYDITNVLEGIGLIEKKLKNRIRWKGL 755 PS + GS R++ SLGLLT KF++L++ A+DG+LDL AA+TL V QKRRIYDITNVLEGI LIEKK KN I+WKG+ Sbjct: 30 PSRRSRGGSSRHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGV 107
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F5_HUMAN (Transcription factor E2F5 OS=Homo sapiens GN=E2F5 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.944e-21 Identity = 58/104 (55.77%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 453 KGNRSTPQTPVSNASEKISYHLGSPSALTPAG--SCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEV-QKRRIYDITNVLEGIGLIEKKLKNRIRWKGL 755 +G R PQ P + A + P L AG S R++ SLGLLT KF++L++ A+DG+LDL AA+TL V QKRRIYDITNVLEGI LIEKK KN I+WKG+ Sbjct: 19 QGQRPPPQPPQAQAPQP-----PPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGV 117
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F4_MOUSE (Transcription factor E2F4 OS=Mus musculus GN=E2f4 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.168e-20 Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 3 Query: 525 PSALTPAGS-CRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEV-QKRRIYDITNVLEGIGLIEKKLKNRIRWKGLDNSIPGEVDADASI-LQADID 815 P A P G+ R++ SLGLLT KF++L++ A+DG+LDL AA+TL V QKRRIYDITNVLEGIGLIEKK KN I+WKG+ AD I L+A+I+ Sbjct: 6 PQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIE 105
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F4_HUMAN (Transcription factor E2F4 OS=Homo sapiens GN=E2F4 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.168e-20 Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 3 Query: 525 PSALTPAGS-CRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEV-QKRRIYDITNVLEGIGLIEKKLKNRIRWKGLDNSIPGEVDADASI-LQADID 815 P A P G+ R++ SLGLLT KF++L++ A+DG+LDL AA+TL V QKRRIYDITNVLEGIGLIEKK KN I+WKG+ AD I L+A+I+ Sbjct: 6 PQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIE 105
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F5_RAT (Transcription factor E2F5 (Fragment) OS=Rattus norvegicus GN=E2f5 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.797e-20 Identity = 49/71 (69.01%), Postives = 60/71 (84.51%), Query Frame = 3 Query: 546 GSCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEV-QKRRIYDITNVLEGIGLIEKKLKNRIRWKGL 755 GS R++ SLGLLT KF++L++ A+DG+LDL AA+TL V QKRRIYDITNVLEGI LIEKK KN I+WKG+ Sbjct: 2 GSSRHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGV 72
BLAST of FC878459 vs. ExPASy Swiss-Prot
Match: E2F1_HUMAN (Transcription factor E2F1 OS=Homo sapiens GN=E2F1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 3 Query: 537 TPAGSCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGLDNSI 767 +P RY++SL L TK+F+ L+ H+ DG++DLN AAE L+VQKRRIYDITNVLEGI LI KK KN I+W G ++ Sbjct: 121 SPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTTV 197 The following BLAST results are available for this feature:
BLAST of FC878459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878459 ID=FC878459; Name=FC878459; organism=Citrus clementina; type=EST; length=820bpback to top |