FC878566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.180e-61 Identity = 122/218 (55.96%), Postives = 144/218 (66.06%), Query Frame = 3 Query: 219 APSLFTNI-------IDRPLHPSVDPKHVFTGNFAPV-DELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVAST-ARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETFA 845 A +LFT + ID P PSVDPKHV + NFAPV DEL PT+C ++ G LP SL G YIRNGPNPQ +PRGP H F+GDGMLH++++ G+A SRYVKTYKY +E+ G + PNVFSGF G+ V A T ARVL G N G GLANT GESDLPY ++ T GDIET+GR+DFD +L SMTAHPKTD T ETFA Sbjct: 82 ATALFTTVEDVINTFIDPPSRPSVDPKHVLSDNFAPVLDELPPTDCEIIHGTLPLSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIKIHNGKATLCSRYVKTYKYNVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGETFA 299
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 82/199 (41.21%), Postives = 115/199 (57.79%), Query Frame = 3 Query: 249 RPLHPSVDPKHVFTGNFAPVDELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETFA 845 +PL +VDP+H +GN+APV E VDGK+PD + G Y+RNG NP P H F+GDGM+H+++++ G A YS R+ +T + E+ G IFP +G + + + AR L G +N K G G+AN E DLPY ++ T GD+ET+GR+DFD +L ++M AHPK D TKE FA Sbjct: 101 KPLPKTVDPRHQISGNYAPVPEQSVKSSLSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAMIAHPKIDPVTKELFA 299
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.589e-36 Identity = 77/207 (37.20%), Postives = 115/207 (55.56%), Query Frame = 3 Query: 225 SLFTNIIDRPLHPSVDPKHVFTGNFAPVDELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETFA 845 +L ++ D PL + DP+ GN++PV E V+G +PD + G YIRNG NP P H F+GDGM+H+++++ G A Y+ R+ KT + E+ G +FP +G + + + AR L G +N + G G+AN E DLPY +K T+ GD++T+GR+DFD +L ++M AHPK D TKE A Sbjct: 86 ALISHEQDSPLPKTADPRVQIAGNYSPVPESSVRRNLTVEGTIPDCIDGVYIRNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDLPYQLKITQTGDLQTVGRYDFDGQLKSAMIAHPKLDPVTKELHA 292
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 78/198 (39.39%), Postives = 109/198 (55.05%), Query Frame = 3 Query: 252 PLHPSVDPKHVFTGNFAPVDELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETFA 845 PL + DP GNFAPV+E V GKLPDS+ G Y+RNG NP H P HFF+GDGM+H+++ G A Y+ R+ +T ++ ER G +FP +G + + + AR G V+ G G+AN E DLPY ++ T GD++T+GR+DFD +L ++M AHPK D + E FA Sbjct: 112 PLPKTADPSVQIAGNFAPVNEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHHFFDGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLESTMIAHPKVDPESGELFA 309
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 84/255 (32.94%), Postives = 125/255 (49.02%), Query Frame = 3 Query: 126 QNIPFRSSQKPKICAPIQSLMGTNSSYNTKSAPSLFTNII------------DRPLHP---SVDPKHVFTGNFAPVDELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETFA 845 Q+ F+ K+C + +L+ ++ N K P T + +R HP + DP GNF PV E V G +P+ + G Y+RNG NP H P H F+GDGM+H+++ G Y+ R+ +T + ER+ G +FP +G + + + + R L G V+ G G+AN E DLPY +K T+ GD+ET GR+DFD +L ++M AHPK D T+E FA Sbjct: 115 QSPTFKPPSWKKLCNDVTNLIPKTTNQNPKLNPVQRTAAMVLDAVENAMISHERRRHPHPKTADPAVQIAGNFFPVPEKPVVHNLPVTGTVPECIQGVYVRNGANPLHKPVSGHHLFDGDGMVHAVRFDNGSVSYACRFTETNRLVQERECGRPVFPKAIGELHGHLGIAKLMLFNTRGLFGLVDPTGGLGVANAGLVYFNGHLLAMSEDDLPYHVKVTQTGDLETSGRYDFDGQLKSTMIAHPKIDPETRELFA 369
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.314e-34 Identity = 84/212 (39.62%), Postives = 114/212 (53.77%), Query Frame = 3 Query: 216 SAPSLFTNIIDRPLHPSVDPKHVFTGNFAPV-DELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNV--FSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETF 842 SA L + H P H +GNFAPV DE P V G LP+ L G ++R GPNP+ MP H+F+GDGM+H M++ G+A Y+SRYVKT + K E G F + GF+GL MVQ A++ + +++ G G NT E+D PY++K +GD++TLG D+D+ L S TAHPK D T E F Sbjct: 29 SAVDLIEKAVVYLFHDKSKPCHYLSGNFAPVVDETPPCPDLPVRGHLPECLNGEFVRVGPNPKFMPVAGYHWFDGDGMIHGMRIKDGKATYASRYVKTSRLKQEEYFEGPKFMKIGDLKGFFGLF-MVQMQLLRAKLKV--IDVSYGVGTGNTALIYHHGKLLALSEADKPYVVKVLEDGDLQTLGLLDYDKRLSHSFTAHPKVDPFTDEMF 237
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.664e-33 Identity = 83/214 (38.79%), Postives = 115/214 (53.74%), Query Frame = 3 Query: 210 TKSAPSLFTNIIDRPLHPSVDPKHVFTGNFAPV-DELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNV--FSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETF 842 T A L II + + S P H +GNFAPV DE P + V G LPD L G ++R GPNP+ P H+F+GDGM+H +++ G+A Y SR+VKT ++K E G F + G +GL+ MV A++ + +++ G G ANT E D PY IK +GD++TLG D+D+ L + TAHPK D T E F Sbjct: 23 TSKAVDLLEKIIVKLFYDSSLPHHWLSGNFAPVKDETPPVKDLTVQGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKASYVSRFVKTSRFKQEEYFNGSKFMKIGDLKGLFGLL-MVNMQMLRAKLKI--LDVSYGHGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNFTAHPKVDPFTGEMF 233
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.785e-33 Identity = 86/252 (34.13%), Postives = 123/252 (48.81%), Query Frame = 3 Query: 135 PFRSSQKPKICAPIQSLMGTNSSY-NTKSAPSLFTNIID-------------RPLHPSVDPKHVFTGNFAPVDELGPTECPV-----VDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAI-YSSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTT 830 PF+ P + +P+ S + +Y N L ++D RPL DP +GNFAPV+E CPV V G++P L G YIRNG NP P H F+GDGM+H++ + + YS RY KT + E G +FP +G + + TAR +G V+ +G G+AN E DLPY +K +GD+ET+GR+ FD+++ +S+ AHPK D TT Sbjct: 37 PFKIPTLPDLTSPVPSPVKLKPTYPNLNLLQKLAATMLDKIESSIVIPMEQNRPLPKPTDPAVQLSGNFAPVNE-----CPVQNGLEVVGQIPSCLKGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDATT 283
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.375e-32 Identity = 70/190 (36.84%), Postives = 103/190 (54.21%), Query Frame = 3 Query: 252 PLHPSVDPKHVFTGNFAPVDELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTD 821 PL + DPK GNFAPV E + V GK+P + G Y+RNG NP + P HFF+GDGM+H+++ + G A Y+ R+ +T + E+ G +FP +G + + + AR L V+ G G+AN E DLPY ++ T GD+ T+GR+DF+ +L ++M AHPK D Sbjct: 131 PLPKTADPKVQIAGNFAPVPEHAADQALPVVGKIPKCIDGVYVRNGANPLYEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLLAMSEDDLPYHVRITSNGDLTTVGRYDFNGQLNSTMIAHPKLD 320
BLAST of FC878566 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32 Identity = 77/206 (37.38%), Postives = 108/206 (52.43%), Query Frame = 3 Query: 228 LFTNIIDRPLHPSVDPKHVFTGNFAPVDELGPTECPVVDGKLPDSLTGTYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRAIYSSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTXXXXXXXXXXXXGESDLPYIIKCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETFA 845 L ++ + L+ S P H TGNF PV E PT+ V G LPD L G ++R GPNP+ P H+F+GDGM+H +++ G+A Y SR+V+T + K E G F + GL ++ R + ++L G G NT E+D PY IK +GD++TLG D+D+ L S TAHPK D T E F+ Sbjct: 32 LLEKLLVKFLYDSSLPHHYLTGNFGPVTETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVETSRLKQEEYFGRSKFMKI-GDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGEMFS 236 The following BLAST results are available for this feature:
BLAST of FC878566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878566 ID=FC878566; Name=FC878566; organism=Citrus clementina; type=EST; length=845bpback to top |