FC878568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFA_ARATH (Probable phenylalanyl-tRNA synthetase alpha chain OS=Arabidopsis thaliana GN=At4g39280 PE=2 SV=3) HSP 1 Score: 456.447 bits (1173), Expect = 8.935e-128 Identity = 222/267 (83.15%), Postives = 240/267 (89.89%), Query Frame = 1 Query: 52 MAEEAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 MAEEAILG+L+ NEQI+DSG F+AE DHN++VNVIKSLHGFRYID QDIK+ETW+LT EGKKYAAEGSPEVQLFLAVP EGSISKDELQKKL PAVFKIGCSQAGKNKWVEMGKQVSRKV++VEDKVK LLQ+Q G KE I+SLKARKLIVPQ WKGYSV+KGPNYAP+RKK ATDLTRENLQ +WKELEFKEYNF AKG P + GHLH LLKVRKQ KDIF+QMGFEEMPTNN+VESSFWNFDALFQPQQHPARDSHDT Sbjct: 1 MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTDEGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQVSRKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKVATDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPTNNYVESSFWNFDALFQPQQHPARDSHDT 265
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFA_DANRE (Phenylalanyl-tRNA synthetase alpha chain OS=Danio rerio GN=farsa PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 2.479e-61 Identity = 129/273 (47.25%), Postives = 176/273 (64.47%), Query Frame = 1 Query: 61 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 EA+L +E+ + DS + +A G DH VV +KSL I A+ + W LTGEG++ A +GS E ++F A+PAEG + +++L K A K+G S+A NKW+ + G +V R V+++ED V+D L VQNG + L ++E + LK RKL+ T K Y + KG +++ K T+LT E + G+WKE +FK YNF A G + GHLHPL+KVR Q + IFL+MGF EMPTNNF+ESSFWNFD+LFQPQQHPARD HDT Sbjct: 8 EALLQRVEQLDGGVDSQDVSAALGVDHQLVVGAVKSLQALGEVISAEQKSSKHWELTGEGREIAEQGSHEARVFNAIPAEG-LPQNQLMKM---ASGKVGFSKAMSNKWIRLDKAHEGGPRVFRTVESIEDTVRDKLQLVQNGQSAKLEEKEKNELKKRKLLAEVTVKSYWITKGNSFSTTITKQETELTPEMIASGNWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDT 276
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFA_CHICK (Phenylalanyl-tRNA synthetase alpha chain OS=Gallus gallus GN=FARSA PE=1 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.958e-59 Identity = 132/282 (46.81%), Postives = 172/282 (60.99%), Query Frame = 1 Query: 46 SAMAEEAILGYLEKNEQISDSG----NFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQ--NGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 S E +L LE+ + G AA G DH +V +KSL I+A+ W L+ EG++ +GSPEV+LF +VP+EG D + KL A ++G S+A NKW+ + G ++ R V V+D V+ L QVQ NG +LS+ E + LK RKL++ T K Y +RKG ++ + TDLT E + G W++L FK YNF+A G P GHLHPLLKVR QL+ IFL+MGF EMPT+NFVESSFWNFDALFQPQQHPARD HDT Sbjct: 2 SPSVAELLLQRLERTPPGPEGGLCSLEAAAALGLDHQTLVGAVKSLQALGEVIEAETRATTRWELSAEGEEVLRDGSPEVRLFRSVPSEGLPQSDAM--KLPGA--QVGFSKAMANKWLRLDKGAPGGPRIFRAVDAVQDVVQSSLRQVQEGNGGSLSERERTDLKRRKLLLEVTLKSYWIRKGSAFSTAVVRQETDLTPEMIATGSWRKLPFKAYNFSALGLPPTCGHLHPLLKVRSQLRQIFLEMGFTEMPTDNFVESSFWNFDALFQPQQHPARDQHDT 279
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFA_RAT (Phenylalanyl-tRNA synthetase alpha chain OS=Rattus norvegicus GN=Farsa PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.078e-56 Identity = 120/280 (42.86%), Postives = 170/280 (60.71%), Query Frame = 1 Query: 52 MAEEAILGYLEKNEQISDSG----NFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 MA+ +L L + +++D G A + G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F ++P EG + + +Q K+G S+A NKW+ + G +V R V ++ED+V+ L QVQ G A L+++E + L+ RKL+ K Y V KG ++ K +L+ E + G W++ FK YNF+A+G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDT Sbjct: 1 MADNPVLEQLLRRLEVADGGLDSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKCWELTTEGEEIAREGSHEARVFRSIPLEGLVQSELMQLPSG----KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSIEDEVQRRLQQVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKGFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDT 276
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFA_HUMAN (Phenylalanyl-tRNA synthetase alpha chain OS=Homo sapiens GN=FARSA PE=1 SV=3) HSP 1 Score: 220.32 bits (560), Expect = 1.078e-56 Identity = 124/273 (45.42%), Postives = 168/273 (61.54%), Query Frame = 1 Query: 61 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 E +L LE ++ DS AAE G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F ++P EG +++ EL + K+G S+A NKW+ + G +V R V ++ED+V+ L V+ G A L ++E S L+ RKL+ T K Y V KG ++ K T+L+ E + G W++ FK YNF A G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDT Sbjct: 8 ELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKHWELTAEGEEIAREGSHEARVFRSIPPEG-LAQSELMRLPSG---KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDT 276
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFA_PONAB (Phenylalanyl-tRNA synthetase alpha chain OS=Pongo abelii GN=FARSA PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.096e-56 Identity = 123/273 (45.05%), Postives = 167/273 (61.17%), Query Frame = 1 Query: 61 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 E +L LE ++ DS AAE G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F ++P EG +++ EL + K+G S+A NKW+ + G +V R V ++ED+V+ L V+ G A L ++E S L+ RKL+ K Y V KG ++ K T+L+ E + G W++ FK YNF A G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDT Sbjct: 8 ELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKRWELTAEGEEIAREGSHEARVFRSIPPEG-LAQSELMRLPSG---KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVILKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDT 276
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFAA_XENLA (Phenylalanyl-tRNA synthetase alpha chain A OS=Xenopus laevis GN=farsa-A PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.556e-55 Identity = 117/259 (45.17%), Postives = 157/259 (60.62%), Query Frame = 1 Query: 103 DSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 DS AA G +H VV +KSL I A+ + W L+ EG++ EGS E ++F +P EG + +++ K+G S+A NKW+ + G ++ R V ++ED VK+ L + G A +++++ + LK RKL+ T K Y V KG ++ K TDLT E + G W+E +FK YNF+A G E GHLHPLLKVR Q + IFL+MGF EMPTNNF+ESSFWNFDALFQPQQHPARD HDT Sbjct: 23 DSLELAALLGVEHQQVVGAVKSLQCLGEIIQAEQRSSKKWELSSEGEEIGREGSHEARVFQTLPKEGLLQAQLMKQPFS----KVGFSKAMSNKWIRLDKAAEGGPRIYRVVDSIEDTVKEKLQLILKGRADDVNEKDRNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFDALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDT 277
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFAB_XENLA (Phenylalanyl-tRNA synthetase alpha chain B OS=Xenopus laevis GN=farsa-B PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.655e-55 Identity = 121/259 (46.72%), Postives = 159/259 (61.39%), Query Frame = 1 Query: 103 DSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQ------VSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 D+ AA DH VV +KSL I+A+ + W L+ EG++ A GS E ++F ++P EG + + + KL A K+G S+A NKW+ + K V R V+ +ED VK+ L + G A +++++ + LK RKL+ T K Y V KG ++ K TDLT E + G W+E +FK YNFNA G E GHLHPLLKVR Q + IFL+MGF EMPTNNF+ESSFWNFDALFQPQQHPARD HDT Sbjct: 23 DTLELAAVLSVDHQQVVGAVKSLQCLGEIIEAEQRSSKKWELSSEGEEIAQVGSHEARVFQSLPKEGLLQAELM--KLPFA--KVGFSKAMSNKWIRLDKAAAGGPCVYRVVETIEDTVKEKLQLILKGRADDVNEKDKNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFNALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDT 277
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFA_MOUSE (Phenylalanyl-tRNA synthetase alpha chain OS=Mus musculus GN=Farsa PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.467e-55 Identity = 118/280 (42.14%), Postives = 168/280 (60.00%), Query Frame = 1 Query: 52 MAEEAILGYLEKNEQISDSG----NFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 MA+ +L L + +++D G A + G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F ++P EG + + + K+G S+A NKW+ + G +V R V ++ED+V+ L VQ G A L+++E + L+ RKL+ K Y V KG ++ K +L+ E + G W++ FK YNF+A+G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDT Sbjct: 1 MADNPVLELLLRRLEVADGGLDSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKCWELTTEGEEIAREGSHEARVFRSIPLEGLVQSELMHLPSG----KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSIEDEVQKRLQLVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKAFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDT 276
BLAST of FC878568 vs. ExPASy Swiss-Prot
Match: SYFA_DROME (Probable phenylalanyl-tRNA synthetase alpha chain OS=Drosophila melanogaster GN=CG2263 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.363e-51 Identity = 120/273 (43.96%), Postives = 165/273 (60.44%), Query Frame = 1 Query: 61 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSL--HGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVS-----RKVQNVEDKVKDLLLQVQ--NGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDT 852 E IL +LE ++ +D+ + AA DH +V +KS+ HG + A+ + ++ LT EG+ GS E ++ VP EG I++ L A K+G S+A + W+ + K V+ RKV + D V++ L QV G L +E++ K RKL+ T K + + +GP +A K TDLT E L G W +L+FK YNF+A G P GHLHPLLKVR + + IFL+MGF EMPTNN+VESSFWNFDAL+QPQQHPARD+HDT Sbjct: 7 ERILQHLETTDK-ADTLDLAALFAEDHQKIVGSLKSIQAHG-ELVTAETVTHKSLGLTDEGRAVVENGSHEALVYDLVPPEG-IAQAALMAA-GGANAKVGFSKAMSHGWILVDKSVTPPLVRRKVDTITDVVRNQLQQVALGKGDQLPAKEVADFKKRKLLQETTTKSFVLARGPEFATTLTKLETDLTVEMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALYQPQQHPARDAHDT 275 The following BLAST results are available for this feature:
BLAST of FC878568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878568 ID=FC878568; Name=FC878568; organism=Citrus clementina; type=EST; length=852bpback to top |