FC878605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB_ARATH (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1) HSP 1 Score: 412.149 bits (1058), Expect = 1.640e-114 Identity = 200/245 (81.63%), Postives = 230/245 (93.88%), Query Frame = 2 Query: 38 VRGLLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 +RGL+NKLVSRSL+++G+WQ QQLRRLNIHEYQGAELM KYG+NVPKG+A +S++EVKKAIQD FP+ ELVVKSQILAGGRGLGTFKSGLKGGVHIVK++E E++AGKMLGQ+LVTKQTGPQGK+VSKVYLCEKLSLVNEMYF+I+LDRK+AGP+II C KGGTSIEDLAEK+P+MI+KVPIDVF GITDEDAAKVVDGLAPK ADR D+IEQVKKLY+LF ++DCT+LEINPLAETS QLVA Sbjct: 1 MRGLVNKLVSRSLSISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVA 245
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB_ORYSJ (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0621700 PE=1 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 4.467e-112 Identity = 200/246 (81.30%), Postives = 220/246 (89.43%), Query Frame = 2 Query: 35 MVRGLLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 MVRG L KL SR+L+VAG+WQ QQLRRLNIHEYQGAELM KYGINVP+G A SV+EVK +++ FP KE+VVKSQILAGGRGLGTFKSGL+GGVHIVK EE E LA KMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAI LDR TAGP+II CSKGGTSIEDLAEKYP+MI+KVPIDVF GITD+DAAKVVDGLAPK ADR +IEQ+KKLY+LFC+SDCTLLEINPLAET+ +LVA Sbjct: 1 MVRGSLGKLASRALSVAGKWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQILAGGRGLGTFKSGLQGGVHIVKAEEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDAAKVVDGLAPKTADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVA 246
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB1_DICDI (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsC PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.152e-49 Identity = 102/218 (46.79%), Postives = 142/218 (65.14%), Query Frame = 2 Query: 104 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETS 754 Q R LN+HEYQ ++M YGIN P G + +E +K + + ++LVVK+Q+LAGGRG G F SGLKGGV + E+V+ A KMLG LVTKQTG GK+V +VY+ E+ L EMYFAI++DRK GP+++ +GG IE +A P+ I K PID+ G+ E ++ + L + + A +Q+KKLY F ++DCTL+EINPLAET+ Sbjct: 31 QKRFLNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAE--VMNTQDLVVKAQVLAGGRGKGIFTSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKEMYFAILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFSKKNISMAQDQMKKLYDFFIKNDCTLVEINPLAETA 246
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB1_PIG (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.259e-47 Identity = 102/225 (45.33%), Postives = 145/225 (64.44%), Query Frame = 2 Query: 89 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETS 754 Q QQQQ R L++HEY EL+ + G+++PKG S DE + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S+GG +IED+A + P IVK PID+ GI E A ++ G P + D A E + KLY LF + D T++EINP+ E S Sbjct: 6 QIQQQQQRNLSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPPSIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDS 226
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB1_MOUSE (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Sucla2 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.121e-46 Identity = 105/230 (45.65%), Postives = 146/230 (63.48%), Query Frame = 2 Query: 89 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETS-GKQL 766 Q QQQQ R L++HEY EL+ + G++VPKG S DE + K++V+K+Q+LAGGRG GTF SGLKGGV IV EE + ++ +M+GQ L+TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG ++GG +IED+A + P IVK PID+ GI E A + G + D A E + KLY LF + D T++EINP+ E S GK L Sbjct: 44 QVQQQQQRTLSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFPSNIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVL 269
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB1_HUMAN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.121e-46 Identity = 101/225 (44.89%), Postives = 144/225 (64.00%), Query Frame = 2 Query: 89 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETS 754 Q QQQQ R L++HEY EL+ + G++VPKG S DE + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S GG +IED+A + P I+K PID+ GI E A ++ G P + + A E + KLY LF + D T++EINP+ E S Sbjct: 44 QVQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDS 264
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB_NEUCR (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Neurospora crassa GN=B9J10.140 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.464e-46 Identity = 100/226 (44.25%), Postives = 145/226 (64.16%), Query Frame = 2 Query: 98 QQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 QQQ R L+IHEY A+L+ +YGI VPKG VA +AI +++V+K+Q+LAGGRG GTF +GLKGGV ++ E + A +M+G L+TKQTG QG++ S VY+CE+ E Y A+++DR + GP+I+ S+GG IE +A++ P I ID+ G+TDE A + L +A + ++KLYK+FCE D T +EINPL+ETS +++A Sbjct: 31 QQQRRALSIHEYLSADLLRQYGIGVPKG-DVARTGAEAEAIAKQIGG-EDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPEAIHTTYIDINVGVTDEMARDIATKLGFSEQCVEEAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVMA 254
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB1_MACFA (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Macaca fascicularis GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.261e-46 Identity = 99/225 (44.00%), Postives = 144/225 (64.00%), Query Frame = 2 Query: 89 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETS 754 Q QQQQ R L++HEY EL+ + G+++PKG S DE + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S+GG +IED+A + P I+ PID+ GI E A ++ G P + + A E + KLY LF + D T++EINP+ E S Sbjct: 44 QVQQQQQRNLSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDS 264
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB1_BOVIN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.151e-45 Identity = 97/223 (43.50%), Postives = 141/223 (63.23%), Query Frame = 2 Query: 89 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETS 754 Q Q QQ R L++HEY EL+ + G+++PKG S DE + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S GG +IED+A + P IVK PID+ GI E A ++ + + + A E + KLY F + D T++EINP+ E S Sbjct: 44 QIQHQQQRNLSLHEYLSMELLQEAGVSIPKGHVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDS 264
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_AKKM8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=sucC PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.987e-44 Identity = 95/220 (43.18%), Postives = 137/220 (62.27%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 +NIHEYQ +L ++G+ PKG+A ++ E + ++ + VVK+Q+ AGGRG GTFK+G KGGVH+VK EEVE++AGKML Q+LVTKQTG GK+VSK+ + E + L E YFAI+ DR P+I+ ++GG IE++A P I++ I+ GI A K+ L A + + +YKLF DC+L+EINPL T+ ++ A Sbjct: 1 MNIHEYQAKQLFERFGVATPKGIAASTAQEAAQTARNM--GLSQYVVKAQVHAGGRGKGTFKNGFKGGVHVVKSVEEVEEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYFAILQDRARECPVIVASTEGGMDIEEVAATRPEAIIREHINPALGILPFQALKIAVALELTGPLLRQATKLITNVYKLFTALDCSLVEINPLVVTTDDRVCA 218 The following BLAST results are available for this feature:
BLAST of FC878605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878605 ID=FC878605; Name=FC878605; organism=Citrus clementina; type=EST; length=773bpback to top |