FC878624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.831e-75 Identity = 161/233 (69.10%), Postives = 181/233 (77.68%), Query Frame = 3 Query: 66 NSMELTHITRSASGVSPTLGQLLKRVGDVRKEQTGDETPVHQILDVSDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 +SMEL I+ S TLGQLLK V DVRK GDETPVH+ L+ D + R++PFVLSF+NLTY+V R K + +F R+ DP + KTKTLLN+ISGE RDGEIMAVLGASGSGKSTLIDALANRIAK SLKGT+KLNGE L+SRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPR+L KSKKK+RVQALIDQLG+RNAAKT+IGDEGH Sbjct: 11 DSMELNTIS---SIHDSTLGQLLKNVSDVRKMAIGDETPVHESLN-QDYNDGYMRTVPFVLSFDNLTYNVSVRPK-LDFRNLFPRR-------RTEDPEIAQTARPKTKTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGH 231
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2) HSP 1 Score: 279.256 bits (713), Expect = 1.835e-74 Identity = 158/225 (70.22%), Postives = 174/225 (77.33%), Query Frame = 3 Query: 111 SPTLGQLLKRVGDVRKEQTGDETPVHQILDVSDTSSVE------TRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENL-FSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 S TLGQLLK V DVRK + GDETPVH+ D D SS++ R +PFVLSFNNLTY+V RRK + D VP FSKTKTLL++ISGE RDGEI+AVLGASGSGKSTLIDALANRIAK SLKGT+ LNGE L+SRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPR+L KSKKK+RVQALIDQLG+RNAAKT+IGDEGH Sbjct: 23 SLTLGQLLKNVSDVRKVEVGDETPVHEFFD-RDGSSLDGDNDHLMRPVPFVLSFNNLTYNVSVRRK-----------------LDFHDLVPWRRTSFSKTKTLLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGH 229
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 5.351e-66 Identity = 154/255 (60.39%), Postives = 178/255 (69.80%), Query Frame = 3 Query: 3 NRVVAENNTSPARDTLPFFSTNSMELTHITRSASGVSPTLGQLLKRVGDVRKEQTGDETPVHQILDVSDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFS-KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 +RVVA ++ LPFFS ++ AS T QLL+ V D + H +D++ +S+PFVLSF +LTYSVK RRK +RR +V++ P E +FS KTKTLLN I+GEARDGEI+AVLGASGSGKSTLIDALANRIAK SLKG + LNGEVL S+M K ISAYVMQDDLLFPMLTVEETLMFAAEFRLPR+LSKSKK +RVQALIDQLGLRNAA TVIGDEGH Sbjct: 2 SRVVAADDNM----ALPFFSPEFGNVS----GASSSPTTFAQLLQNVDDSTRRSHHQH---HVDVDLASPD----QSVPFVLSFTDLTYSVKVRRKF-----TWRR------SVSSDPGAPSEGIFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSLKGNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGH 230
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.248e-64 Identity = 151/252 (59.92%), Postives = 170/252 (67.46%), Query Frame = 3 Query: 30 SPAR----DTLPFFST--NSMELTHITRSASGVSPTLGQLLKRVGDVRKEQT-GDETPVHQILDVSDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 SPA+ D LP F S+EL R + VS TL +LL V D +Q+ + V S SS S PFVLSF +LTYSVK ++K P P G ++ TK LLN ISGEAR+GE+MAVLGASGSGKSTLIDALANRI+KESL+G I LNGEVLES + KVISAYVMQDDLLFPMLTVEETLMF+AEFRLP +LSK KKK RVQALIDQLGLRNAAKTVIGDEGH Sbjct: 9 SPAKRVNGDGLPLFYNIHKSVELQRCHRDTARVSVTLAELLMSVEDEGDDQSRAMDIAVASNFWSSVPSSRVPSSSPFVLSFKDLTYSVKIKKKFKPFPCC------------GNSPFDGNDMEMNTKVLLNGISGEAREGEMMAVLGASGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGH 248
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.457e-63 Identity = 140/234 (59.83%), Postives = 170/234 (72.65%), Query Frame = 3 Query: 69 SMELTHITRSASGVSPTLGQLLKRVGDV-RKEQTGDETPVHQILDVSDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGE-VLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 S E+ I+ + SPTLG+LLK D RK+ G+ P ILD++ + ETRS+PF+LSFNNL+Y+V RR+ F R+ + KTLL+DI+GEARDGEI+AVLG SG+GKSTLIDALA R+A++SLKGT+ LNGE VL+SR+LKVISAYVMQDDLLFPMLTV+ETLMFA+EFRLPR+L KSKK RV+ LIDQLGLRNAA TVIGDEGH Sbjct: 5 SAEILDISHTGGNESPTLGELLKDFNDSGRKKYPGENAPTQHILDLAPAA--ETRSVPFLLSFNNLSYNVVLRRRFD-----FSRRKT-----------------ASVKTLLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAEDSLKGTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSKKMERVETLIDQLGLRNAADTVIGDEGH 214
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 6.769e-61 Identity = 147/263 (55.89%), Postives = 175/263 (66.54%), Query Frame = 3 Query: 27 TSPAR-----DTLPFFSTNSMELTHITRSA--SGVSPTLGQLLKRVGDVRKEQT------GDETPVHQILDV----SDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 +SPA+ + LP + N M + R + + VS T + L V D R +++ G +P++ + + S PFVLSF +LTYSVK ++K L A RR G + TK LLN ISGEAR+GE+MAVLGASGSGKSTLIDALANRIAK+SL+G+I LNGEVLES M KVISAYVMQDDLLFPMLTVEETLMF+AEFRLPR+LSK KKK RVQALIDQLGLR+AAKTVIGDEGH Sbjct: 8 SSPAKRVDGNNDLPMYYVNPMSVEPQGRPSDTTRVSVTFAEHLMNVEDARNDESASSRALGIASPINSAASSFNSWASAPASSISSSPFVLSFTDLTYSVKIQKKFNPL-ACCRRS--------------GNDSSVNTKILLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGH 255
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 6.336e-59 Identity = 132/223 (59.19%), Postives = 160/223 (71.75%), Query Frame = 3 Query: 111 SPTLGQLLKRVGDVRKEQTGD----ETPVHQILDVSDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGE-VLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 SPTL +LLK RK +GD + P H I+DV ++ + +P+VL+FNNL Y V RR+ F RQ + KTLL+D+SGEA DG+I+AVLGASG+GKSTLIDALA R+A+ SL+G++ LNGE VL+SR+LKVISAYVMQDDLLFPMLTV+ETLMFA+EFRLPR+LSKSKK RV+ALIDQLGLRNAA TVIGDEGH Sbjct: 27 SPTLDELLKDCDSFRKGDSGDGVKSDDPAHHIIDVE---ALYVKPVPYVLNFNNLQYDVTLRRRF-----GFSRQ-------------------NGVKTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGH 222
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.367e-52 Identity = 113/188 (60.11%), Postives = 137/188 (72.87%), Query Frame = 3 Query: 201 VSDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 V D E +PFVL+FN+LTY+V +++ G P +K KTLLN I+GEA++GEI+A+LGASG+GKSTLIDALA +IA+ SLKGT+ LNGE L+SR+L+VISAYVMQ+DLLFPMLTVEETLMFAAEFRLPR+LSKSKK+ RV+ LIDQLGL TVIGDEGH Sbjct: 7 VIDVDESEIPPIPFVLAFNDLTYNVTLQQR--------------FGLRFGHSP-------AKIKTLLNGITGEAKEGEILAILGASGAGKSTLIDALAGQIAEGSLKGTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTTVKNTVIGDEGH 173
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22 Identity = 55/124 (44.35%), Postives = 85/124 (68.55%), Query Frame = 3 Query: 381 SKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 S K++LN ISG A GE++A++G SGSGK+TL++AL R ++++ G++ N + S+ LK +V QDD+LFP LTV+ETL + A RLP+TL++ +K+ R ++I +LGL T+IG Sbjct: 162 SSEKSILNGISGSAYPGELLALMGPSGSGKTTLLNALGGRFNQQNIGGSVSYNDKPY-SKHLKTRIGFVTQDDVLFPHLTVKETLTYTALLRLPKTLTEQEKEQRAASVIQELGLERCQDTMIG 284
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22 Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = 3 Query: 381 SKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 S K +L ISG GE++A++G SGSGK+TL+ LA RI++ S G++ N + S+ LK +V QDD+LFP LTV+ETL +AA RLP+TL++ +KK R +I +LGL T+IG Sbjct: 174 SVEKEILTGISGSVNPGEVLALMGPSGSGKTTLLSLLAGRISQSSTGGSVTYNDKPY-SKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDTMIG 296 The following BLAST results are available for this feature:
BLAST of FC878624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878624 ID=FC878624; Name=FC878624; organism=Citrus clementina; type=EST; length=819bpback to top |