FC878698

Overview
NameFC878698
Unique NameFC878698
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length960
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC878698 vs. ExPASy Swiss-Prot
Match: YO092_YEAST (Uncharacterized membrane protein YOL092W OS=Saccharomyces cerevisiae GN=YOL092W PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.064e-14
Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = 2 
Query:  566 QWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRK 841
            Q  G+L A +Y+G R+PQI LN KR S EG++ L F+FA + N T++ S++V + +W+ +  N  WL+ +I  + +D  I  Q+  Y+  +K
Sbjct:  213 QIFGYLSALLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIVISLDWKYLIMNASWLVGSIGTLFMDFVIFSQFFIYKRNKK 304
The following BLAST results are available for this feature:
BLAST of FC878698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YO092_YEAST6.064e-1438.04Uncharacterized membrane protein YOL092W OS=Saccha... [more]
back to top
Properties
Property NameValue
Genbank descriptionIC0AAA71CA03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA71CA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878698 ID=FC878698; Name=FC878698; organism=Citrus clementina; type=EST; length=960bp
GCTTTTGGGTCCAATTGCCGATCAATGGCCTCTCTGACTCTACACCATAA
GTACTGTAGTGTTAGTGCTGCAAGGTGTATACTACGATCATATTTTCAAG
AGATTGAAAGGCCGCCACACTAAAGCTACACGAAGGGAGGAGGAAGAGAA
AAAACCTTTGGCACCTAAGTCAGGTGACGCGGCCATTCCCATTCCCAAGG
CATCAGTAAAATCATCTCCTCGAAGAGAGTATTACTACACGTCAGCAAGA
TCGTTAGCAAGCAGTGGCACTCCTCCATTTCGCACGTTTCTCAGAGCAGC
GCAAAGTGGGCCTTCAGCTTTGGGACTTGACAACGATTCCTCGTCGGATG
ATGAGGCGGCAGCAGCGGCTCCCACGCTTTCATCTTCTGGGAACCCACCG
ACTAGCCAGCCCAGGCCCATCCCAAGATCTGCTGGTTATGGAACGTTTCT
TGCTGCATCTGTTAACCTTCCTTTCCAAAGTAATGCACTGGCGGGAGCTA
TGGCAGCTGGGTTTCATTCAAGAACACTTTTAAACGGAAATAACATGGAG
CACAGTGCTTTTGGACAATGGCTGGGATGGCTGATGGCAGCTATTTACAT
GGGCGGCCGTCTCCCCCAAATATGGCTAAACATTAAAAGAGGGAGCGTGG
AGGGTCTCAATCCTCTCATGTTCGTGTTTGCATTAGTCGCGAATGTCACT
TACGTTTTAAGTATTGTTGTGAGAACCACGGAATGGGAAAGTATAAAGGC
AAATATGCCATGGTTGCTGGATGCCATTGTCTGCGTGTTGCTCGACTTAT
TTATTATACTGCAGTACATCTATTACAGGTATTTCAGAAAGAAAGTACGG
ATTATGGAGAAGATGACGACGGCGACTATATGGATGCAACTAAAGCAAAT
GATTATTCTTAATTGCTCTTTTTGTATTTATTGGTACTTTTAACGTCTAT
TTATTTCCGT
back to top