FC878715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.639e-92 Identity = 178/269 (66.17%), Postives = 201/269 (74.72%), Query Frame = 1 Query: 79 MAEDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEIHEYMLSKAP--PVPQLSTCEEQPG-NREGEAQASSIDAMVAGAGEGLPAP---VGDRIIEEVQEDLPASMNPHPVVAG-TSREVPANASGVQLQPKPETRGQKP 864 MA++RYN KNPAVKRILQEVKEMQ+NPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPA+YPFKPPSFMLLTPNGRFET TKICLSISN+HPEHWQPSWSVRTALVALIAFMPT+PNGALGS+DY K+ERR LAIKSRE PK+G+PERQK+IDEIH+Y+LSKA P P C + P E +Q +A+ + V D+IIEE E + + + P A + EV AS Q QKP Sbjct: 1 MADERYNRKNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPNGALGSVDYPKDERRTLAIKSRETPPKYGSPERQKIIDEIHQYILSKATVVPKPLPLECSQAPSIVSEAHSQVEPQEAITVVEERSIATTDTIVDDQIIEETAEAVNTAASVVPAAAPLPAVEVVVKASVSGEQRMARRAAQKP 269
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.959e-53 Identity = 95/146 (65.07%), Postives = 119/146 (81.51%), Query Frame = 1 Query: 85 EDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 522 E RYNLK+PAVKR+++E E++ +P+D + + PLE+N+FEW F +RGP D++F+GG+YHGRI LP EYP KPPS +LLT NGRFE KICLSIS HHPE WQPSWS+RTAL+A+I FMPT GA+GSLDY EERRALA KS++ Sbjct: 2 ETRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQD 146
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.959e-53 Identity = 95/146 (65.07%), Postives = 119/146 (81.51%), Query Frame = 1 Query: 85 EDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 522 E RYNLK+PAVKR+++E E++ +P+D + + PLE+N+FEW F +RGP D++F+GG+YHGRI LP EYP KPPS +LLT NGRFE KICLSIS HHPE WQPSWS+RTAL+A+I FMPT GA+GSLDY EERRALA KS++ Sbjct: 2 ETRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQD 146
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.906e-32 Identity = 62/135 (45.93%), Postives = 90/135 (66.67%), Query Frame = 1 Query: 112 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKS 516 A KR+ +E K M NP ++ P EENI EW + I GP DT ++GG YHG + P++YP+KPP+ ++TPNGRF+ T++CLS+S++HP+ W P WSV T L L++FM T GS+ ++E++ LA KS Sbjct: 6 AQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFM-TGDESTTGSITTTQQEKKILAKKS 139
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.595e-31 Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 112 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 522 A KR+ +E K M NP ++ P E+NI W + I GP +T +E G YHG + P +YPF PP+ +LTPNGRF T++CLS+S++HP+ W PSWSV T L L++FM T+ ++G+++ +R A KS+E Sbjct: 6 AYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTPNGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTD-ESSIGTMESTDSTKRKYAAKSKE 141
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.133e-31 Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 1 Query: 112 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKS 516 A KR+ +E K M NP ++ P E+NI EW + I GP DT ++GG YHG + P++YP+KPP+ ++TPNGRF+ T++CLS+S++HP+ W P WSV T L L++FM T+ GS+ +++ LA S Sbjct: 6 AHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFM-TSDEATTGSITTSDHQKKTLARNS 139
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.009e-31 Identity = 60/136 (44.12%), Postives = 89/136 (65.44%), Query Frame = 1 Query: 112 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSR 519 A KR+ +E K + +NP ++ P E+NI EW + I GP T +E G YHG + P++YPF PP+ ++TPNGRF+ T++CLS+S++HPE W P+WSV T L L++FM T GS+ +++R LA KS+ Sbjct: 6 ANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITPNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFM-TGDEQTTGSVSTSDKDKRTLAKKSK 140
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.330e-30 Identity = 61/135 (45.19%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 118 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 522 KR+ +E K + NP + P +ENI EW + I GP T FE G YHG ++ P+EYPFKPPS ++TPNGRF T++CLS+S++HP+ W P+WSV T L L++FM T GS+ ++ LA S+E Sbjct: 8 KRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITPNGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFM-TGDESTTGSITTSDNVKKRLARSSKE 141
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UBC6_SCHPO (Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe GN=ubc6 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.975e-30 Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 1 Query: 112 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALA 507 A KR+++E +Q NP + + P ENI EW + I GP DT +EGG YHG + P +YPFKPP+ ++TP+GRF+T T++CLS S+ HP+ W PSW V T LV L++FM T+ G + + RR A Sbjct: 6 AYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFM-TSDEITTGGIVTSESTRRTYA 136
BLAST of FC878715 vs. ExPASy Swiss-Prot
Match: UB2JL_DICDI (Ubiquitin-conjugating enzyme E2 J2-like OS=Dictyostelium discoideum GN=DDB_G0294380 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.975e-30 Identity = 62/152 (40.79%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 79 MAEDRYNLKNPAVK----RILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 522 M+E ++ +P K R+ +E +E+ NP ++ + P NI EW + I G +T +EGG+Y+G++ YP PPS ++ TP+GRFETQ ++CLSIS++HPE W PSWS + L+ L++FM N A GS+ +E+R LA KS + Sbjct: 1 MSEHNSDIVHPPTKDCITRLKREFQEISKNPIENILVTPSPSNILEWHYVILGASNTPYEGGVYYGQLIFKYNYPLSPPSILMTTPSGRFETQKRLCLSISDYHPESWSPSWSTSSILLGLLSFMSDNEVTA-GSIVTTNDEKRILATKSMD 151 The following BLAST results are available for this feature:
BLAST of FC878715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878715 ID=FC878715; Name=FC878715; organism=Citrus clementina; type=EST; length=867bpback to top |