FC878716

Overview
NameFC878716
Unique NameFC878716
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length944
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15364 contig Ccv1_Contig15364:18..961. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.937e-65
Identity = 121/214 (56.54%), Postives = 140/214 (65.42%), Query Frame = 2
Query:  299 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSKP 940
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QG C            S++ G E    ++T +YLA SASAEF AD+AL P EA KVR+QTQPG+A  L D  PK  K EG    YKG+ PLW RQIPYTMMKFA FE  VE +YK  VP P+ +CSKP
Sbjct:   46 LAAAAVEEYSCEFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEENTYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEGLKAFYKGVAPLWMRQIPYTMMKFACFERTVEALYKFVVPKPRSECSKP 259          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.640e-64
Identity = 119/217 (54.84%), Postives = 142/217 (65.44%), Query Frame = 2
Query:  287 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSK 937
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QG C            S+I G E    ++T +YLA SASAEF AD+AL P EA KVR+QTQPG+A  L + +PK  K EG    YKG+ PLW RQIPYTMMKFA FE  VE +YK  VP P+ +C+K
Sbjct:   38 RSRHLAAAAVEEYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEENTYLWRTSLYLASSASAEFFADIALAPMEAAKVRIQTQPGYANTLREAVPKMYKEEGLNAFYKGVAPLWMRQIPYTMMKFACFERTVEALYKFVVPKPRSECTK 254          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.142e-64
Identity = 119/217 (54.84%), Postives = 141/217 (64.98%), Query Frame = 2
Query:  290 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSKP 940
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYKSI +GF V LKE G RG  +GW PT +GYS QG C            S++ G E A  ++T +YLA SASAEF AD+AL P EA KVR+QTQPG+A  L D  PK  K EG    YKG+ PLW RQIPYTMMKFA FE  VE +YK  VP P+ +CSKP
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRGLAKGWAPTFIGYSLQGLCKFGFYEVFKVLYSNMLGEENAYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEGLKAFYKGVAPLWMRQIPYTMMKFACFERTVEALYKFVVPKPRSECSKP 260          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.771e-64
Identity = 118/217 (54.38%), Postives = 142/217 (65.44%), Query Frame = 2
Query:  287 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSK 937
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QG C            S+I G E    ++T +YLA SASAEF AD+AL P EA KVR+QTQPG+A  L + +PK  K EG    YKG+ P+W RQIPYTMMKFA FE  VE +YK  VP P+ +C+K
Sbjct:   37 RSRHLAAAAVEGYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEENTYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLREAVPKMYKEEGLNAFYKGVAPVWMRQIPYTMMKFACFERTVEALYKFVVPKPRSECTK 253          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 4.771e-64
Identity = 118/217 (54.38%), Postives = 140/217 (64.52%), Query Frame = 2
Query:  290 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSKP 940
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QG C            S++ G E    ++T +YLA SASAEF AD+AL P EA KVR+QTQPG+A  L D  PK  K EG    YKG+ PLW RQIPYTMMKFA FE  VE +YK  VP P+ +CSKP
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEENTYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEGLKAFYKGVAPLWMRQIPYTMMKFACFERTVEALYKFVVPKPRSECSKP 260          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.074e-59
Identity = 110/211 (52.13%), Postives = 139/211 (65.88%), Query Frame = 2
Query:  305 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSK 937
            +A S PG++E  S  +YA C +GG+LSCG+THTA+ PLDLVKC +Q++P KY  I++GF   + E+G R   +GW PTLLGYSAQG              +D+ G E A  Y+T +YLA SASAEF AD+ L P EA KVR+QT PG    L    P   K+EG  G YKG+ PLW RQIPYTMMKFA FE  VE +Y++ VP P+ +CSK
Sbjct:   27 SAVSAPGQVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARALVKGWAPTLLGYSAQGLGKFGFYEIFKNVYADMLGEENAYLYRTSLYLAASASAEFFADILLAPMEATKVRIQTSPGAPPTLRGCAPMIYKAEGLTGFYKGLPPLWMRQIPYTMMKFACFEKTVEALYQYVVPKPRAECSK 237          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.178e-54
Identity = 103/203 (50.74%), Postives = 134/203 (66.01%), Query Frame = 2
Query:  332 EMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALG-LYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSK 937
            E  S  ++A C +GGILSCG+THTAV PLDLVKC +Q+D  KYK++ +GF V ++E+G+RG  +GW PT +GYS QG C            +++   E A  Y+T +YLA SASAEF AD+AL P EA KVR+QT PG  +     + +     GA     + +VPLWGRQIPYTMMKFA FE  VE++YKH VP P+ +CSK
Sbjct:   42 EFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRGLAKGWAPTFIGYSLQGLCKFGLYEVFKVQYNNMLDEETAYTYRTFVYLAASASAEFFADIALSPLEAAKVRIQTMPGVRQHTARRVAQDGPERGAWARSTRALVPLWGRQIPYTMMKFACFEKTVELLYKHVVPKPRAECSK 244          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.208e-52
Identity = 103/211 (48.82%), Postives = 140/211 (66.35%), Query Frame = 2
Query:  311 PSEPGK-IEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQT-QPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSK 937
            P+ P K +++Y+P +Y  CT+GG+L+CG TH+A+TPLDL+KC  Q++P  Y    +GF  +L ++G+RG + G +PTL+GYS QG              S + G + A +Y+T IYLA SASAE +AD+ LCP EA+KVRVQT  P FA    +   K V +EG   LY+G+ PLW RQIPYTMMKFASFE IVE +Y + +  PK+  SK
Sbjct:    8 PAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAASASAELLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNEGFGTLYRGLAPLWFRQIPYTMMKFASFERIVEALYTY-IGKPKNMYSK 217          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.722e-43
Identity = 93/206 (45.15%), Postives = 126/206 (61.17%), Query Frame = 2
Query:  317 EPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQ-TQPGFARGLGDGLPK-FVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQ 928
            +P KI++Y+  FYA CT+GGI++CG TH+++TPLDLVKC +Q++P  Y S   GF  ++  +G +  + G+  T +GYS QGA             S    P         +YL  SA+AEF+AD+ LCPFEA+KV+ Q T P F   + DG  K + +S G    YKGIVPLW RQIPYTM KF SFE IV+ IY   +P  K++
Sbjct:    6 QPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGATFVGYSLQGAGKYGGYEYFKHLYSSWLSP------GVTVYLMASATAEFLADIMLCPFEAIKVKQQTTMPPFCNNVVDGWKKMYAESGGMKAFYKGIVPLWCRQIPYTMCKFTSFEKIVQKIYS-VLPKKKEE 204          
BLAST of FC878716 vs. ExPASy Swiss-Prot
Match: MCFN_DICDI (Mitochondrial substrate carrier family protein N OS=Dictyostelium discoideum GN=mcfN PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.915e-37
Identity = 80/187 (42.78%), Postives = 113/187 (60.43%), Query Frame = 2
Query:  341 SPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYK 901
            +P+ +     GG LSC +TH+ V PLD+VK  +Q +P KY  + +GF  ++KEQG  G  +G  PT +GY+ QG              +D  G E A +++  I+LA SA+AE IAD+ALCP EAV++R+  +P FA+   +   K  K EG LG YKG+ P+  +Q+PYTM KFA FE   E +YK
Sbjct:    6 TPSLFLKYGFGGALSCSITHSLVVPLDVVKTLLQTNPGKYTGMMNGFSTVIKEQGPSGLLQGLGPTAVGYALQGFLKFGFYEVFKKTYADAVG-EKADQFRIPIWLAASATAEVIADIALCPNEAVRIRLVAEPTFAKSPVEAFGKIFKQEGVLGFYKGLPPILLKQVPYTMAKFAVFEFTAENVYK 191          
The following BLAST results are available for this feature:
BLAST of FC878716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MPCP_PONAB1.937e-6556.54Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_MOUSE1.640e-6454.84Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_BOVIN2.142e-6454.84Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_RAT4.771e-6454.38Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_HUMAN4.771e-6454.38Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_CAEEL2.074e-5952.13Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_CHOFU1.178e-5450.74Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_SCHPO3.208e-5248.82Probable mitochondrial phosphate carrier protein O... [more]
PIC2_YEAST2.722e-4345.15Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MCFN_DICDI2.915e-3742.78Mitochondrial substrate carrier family protein N O... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA83DH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA83DH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878716 ID=FC878716; Name=FC878716; organism=Citrus clementina; type=EST; length=944bp
CTTTGCCCGGGTTCTAACAAATTGGCAGCGAGAGACAGGAGGAGGAGAAG
AGAAAGAGAAAATTAGAAGAATTCTCTCTGTCTCGCTCTTTTTCTCTATA
ATTCAATCAAGCTTTTTACTCTCAAAATCAAATTTCAAAAATTCCGAAAT
GGCCCTCACAGAATCTTATAGGAAAAACTCTCTGATACCAAGCTACCTCT
ACTCCTCCCAAACATCCTTCCCGTCCACGGCGGCTTTCAATGGAGCGGCA
GCAGCCGCCACGTCGCCGGCTACTCCATCCACGGCGAGGAGGAGCTTCGT
TGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGATGTACTCCCCTGCAT
TCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGCTGCGGTCTCACTCAC
ACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAATATGCAGATTGATCC
TGTTAAGTACAAAAGCATATCATCTGGTTTTGGAGTTTTGCTCAAGGAAC
AGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCTACCTTGCTTGGTTAC
AGCGCCCAAGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTCAAGAAGTA
CTACTCTGACATTGCTGGTCCAGAGTATGCTGCTAAGTACAAGACTTTAA
TCTACCTTGCTGGCTCTGCTTCTGCTGAGTTCATTGCTGATGTTGCTCTT
TGCCCCTTTGAGGCCGTGAAGGTCCGTGTTCAGACTCAGCCTGGTTTTGC
CAGAGGTTTGGGTGATGGACTTCCCAAGTTTGTTAAATCTGAGGGCGCTC
TTGGTTTGTACAAGGGTATTGTTCCTCTTTGGGGGCGTCAGATTCCATAT
ACTATGATGAAGTTTGCTTCTTTTGAAACCATTGTTGAGATGATCTACAA
GCATGCAGTTCCCACACCAAAAGACCAGTGCAGCAAACCTCTGC
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