FC878726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: PPF1_PEA (Inner membrane protein PPF-1, chloroplastic OS=Pisum sativum GN=PPF-1 PE=2 SV=2) HSP 1 Score: 348.206 bits (892), Expect = 3.856e-95 Identity = 184/276 (66.67%), Postives = 199/276 (72.10%), Query Frame = 3 Query: 90 MTKTLISSPPFVGTXXXXXXXXXXXXXXXXXXNRRLASTRVRLSFQEXXXXXXXXXXXXXNSVFSRTESLLYXXXXXXXXXXXXXXXXXXXXXXXXXQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLTFVDGHPPLGWHDTAAYLVLP 917 M KTLISSP F+GT NR T+V+ SF + + +F+R E LLY QKNGGWFGFIS+ MEFVLK+LKDG+ +VHVPYSYGFAIILLTVIVK AT PLTK+QVESTLAMQNLQPKIKAIQ+RYAGNQERIQLETSRLY QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF WIPSL GPT+IAARQSGSGISWL FVDGHP LGW+DTAAYLVLP Sbjct: 1 MAKTLISSPSFLGTPLPSLHRTFSP-------NRTRLFTKVQFSFHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATVAADAAASTDVAA------QKNGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPLLGWYDTAAYLVLP 263
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: ALB3_ARATH (Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2) HSP 1 Score: 342.428 bits (877), Expect = 2.116e-93 Identity = 174/239 (72.80%), Postives = 187/239 (78.24%), Query Frame = 3 Query: 201 STRVRLSFQEXXXXXXXXXXXXXNSVFSRTESLLYXXXXXXXXXXXXXXXXXXXXXXXXXQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLTFVDGHPPLGWHDTAAYLVLP 917 ST VR S E ++F+R ESLLY QK+GGWFGFIS+AME VLKILKDG+ AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL TEGFFWIPSL GPT+IAARQSGSGISWL FVDGHPPLGW+DT AYLVLP Sbjct: 51 STTVRFSLNEIPPFHGLDSSVDIGAIFTRAESLLYTIADAAVVGADSVVTTDSSAV----QKSGGWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLP 285
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: ALB31_ARATH (ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=ALB3L1 PE=2 SV=3) HSP 1 Score: 293.893 bits (751), Expect = 8.629e-79 Identity = 137/178 (76.97%), Postives = 161/178 (90.45%), Query Frame = 3 Query: 384 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLTFVDGHPPLGWHDTAAYLVLP 917 ++ WF I+ ME +LK+LKDG+ VHVPYSYGFAIILLTV+VK ATFPLTKKQVES +AM++L P+IKAIQ+RYAG+QE+IQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GPTT+AARQ+GSGISWL F++GHPPLGW DT AYLVLP Sbjct: 92 QSNDWFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLP 269
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: ALB32_CHLRE (Inner membrane ALBINO3-like protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.2 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 7.339e-62 Identity = 113/176 (64.20%), Postives = 142/176 (80.68%), Query Frame = 3 Query: 390 GGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLTFVDGHPPLGWHDTAAYLVLP 917 GG +++ EFVL+ L +G+++ +PYSYGFAII LTV+VKVATFPLT+KQVESTL++Q LQP++K +Q +YA + E +QLET+RLY++AGVNPLAGC PTLATIPV+IGLY ALSN A EGLLTEGFFWIPSL GPTTI G G+ WL+ F +G PP+GW + AAYLV+P Sbjct: 71 GGPIDVLAQFFEFVLQTLDEGLESAKIPYSYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPRVKELQAKYADDPENLQLETARLYKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLLTEGFFWIPSLGGPTTI-----GGGLEWLVPFENGAPPVGWANAAAYLVMP 241
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: ALB31_CHLRE (Inner membrane ALBINO3-like protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.1 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.999e-59 Identity = 110/181 (60.77%), Postives = 148/181 (81.77%), Query Frame = 3 Query: 381 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLTF-VDGHPPLGWHDTAAYLVLP 917 Q+ GGW +++A+E VL L++G+D +HVPYSYG++IILLT+IVK+ T+PLTK+QVES +A+Q L+P+I I+ R+ ++++IQ ETS LY QAGVNPLAGCLPTLATIP++IGL+ +L+NVAN+GLL T+GF+++PSL+GPTT+A RQSG G SWL DG PP+GW D AAYL LP Sbjct: 108 QRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLP 288
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_PELPD (Inner membrane protein oxaA OS=Pelobacter propionicus (strain DSM 2379) GN=oxaA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.400e-20 Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = 3 Query: 393 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLTFVDGHPPL 881 GWF I++ + + LK + +YG AII++T+I+K FPLT K +S MQ +QP + A++++Y ++E + LYR VNPL GCLP L IPV+ LY+AL + E +FWI LSGP + + G L FV G PL Sbjct: 326 GWFTVIAKPLLYTLKYFYRYVG------NYGVAIIIITIILKALFFPLTHKSYKSMKDMQKIQPMMAALKEKYKDDREGMNKAVMELYRDHKVNPLGGCLPMLVQIPVFFALYKALM-FSIELRHAPFYFWITDLSGPDNLFGQMLG------LPFVIGPLPL 475
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_ANADF (Inner membrane protein oxaA OS=Anaeromyxobacter sp. (strain Fw109-5) GN=oxaA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.829e-20 Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 399 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGIS 845 F F + + FV++ L+ + ++G AIILLTV+VKV +PLT K ++S M+ LQP+I+ ++ ++ ++E++ L T +LY+Q VNPL GCLP L +P+W LY L L E F WI L+ + G+S Sbjct: 337 FAFFARLLLFVMRWLE------RLVANWGLAIILLTVLVKVLLYPLTAKSMQSMNEMRKLQPEIEKLKAKHGNDREKLNLATMQLYQQHKVNPLGGCLPMLIQLPIWFALYATLQTSVE--LYREPFLWIHDLTVKDPLYVLPIAMGVS 477
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_SYNFM (Inner membrane protein oxaA OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=oxaA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20 Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 393 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF-FWIPSLSGP 806 GWF FI++ + +VL +++G AIILLT+++K+ +PLT+K +S M+ +QPK+ I+++Y G++E++ E LYR VNP+ GCLP L IPV+ LY+ L+ L E F WI L+ P Sbjct: 338 GWFTFIAKPLVYVLDWF------YRYTHNWGVAIILLTIVIKILFWPLTQKSYQSMQKMKKIQPKMTQIREKYKGDREKMNQELMGLYRTYKVNPMGGCLPMLLQIPVFFALYRMLNGAVE--LRHEPFMLWIDDLTAP 468
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_CHLT3 (Inner membrane protein oxaA OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=oxaA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.321e-20 Identity = 49/113 (43.36%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 477 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 815 SYG IIL + +K+ T+PLT +S M LQP++KAIQ++Y N E++Q E S +YR+AGVNPL GCLPT+ +P+ ++ + L EGF W LS P +I Sbjct: 369 SYGVIIILFALFIKLVTYPLTMASTKSMKKMAALQPQLKAIQEQYKDNPEKLQAEISGIYREAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQ--LRQEGFLWSNDLSVPDSI 479
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_CLOTE (Membrane protein oxaA OS=Clostridium tetani GN=oxaA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19 Identity = 44/121 (36.36%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 474 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 836 YSYG AII +T+I+K+ PL K + ST+ + +QP+I+ IQ++Y + +R+Q E +LY++ +NP CLP L P+ I LY +N+ +G+ F W+ L+ P + A +G+ Sbjct: 28 YSYGVAIIFVTLIIKLILLPLNIKSMRSTIRINEIQPEIQKIQKKYKNDPQRLQQEQMKLYKEYNINPFGSCLPLLLQWPILIALYYVFNNI--QGISGVSFLWVKDLASPDIVLAVLAGA 146 The following BLAST results are available for this feature:
BLAST of FC878726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 384
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878726 ID=FC878726; Name=FC878726; organism=Citrus clementina; type=EST; length=918bpback to top |