FC878755

Overview
NameFC878755
Unique NameFC878755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length824
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC878755_ssr703 microsatellite FC878755_ssr703:703..714. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15350 contig Ccv1_Contig15350:40..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 4.454e-52
Identity = 100/228 (43.86%), Postives = 140/228 (61.40%), Query Frame = 1
Query:  175 PPEAGGAWPVIGHLHLLGRFPL-HRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWER--------TNNYKSSDHNNNKK----VLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW 819
            PP   G+WP++GHL L+      H+ LG + DKYGPIFTI++G   ALV+SNWE+AKEC T +D V +SRPK +  E++ +N +  G++PYG +WRQ+RKI TLE+LSN R+E L H+R  EV+T +KEL   W           ++ KSS  N+       V VE+ KWF  +TLN +LR+ VG+RC      E+ +    + E +  F    G F V D +PFL+W
Sbjct:   35 PPIISGSWPLLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRIELLSHIRVSEVQTSIKELVNVWSNQISSQYGLLDDTKSSSTNDEPSTTDYVSVELKKWFAQLTLNMVLRMVVGKRCFGDVDVENKEEAKRFLENIRDFMRLIGTFTVGDGVPFLKW 262          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.210e-51
Identity = 94/225 (41.78%), Postives = 140/225 (62.22%), Query Frame = 1
Query:  148 YASNKKKRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW 819
            Y  N + +  P   GAWP++GHL LL G    H+VLG +ADKYGP+FTI++G+  ALV+SNWEM+KE  TT+D   +SRPK +  E++ +N +  G +PYGP+WR++RKI T E LSN R+E+  H+R  EV+T +KEL++ W   N       N ++  LV++ +W   +T N ++R+ VG+R       E  D    + + + +F    G F V+D +P LRW
Sbjct:   29 YRKNSRGKDAPVVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNK------NESRYTLVDIKQWLAYLTFNMVVRMVVGKRYFGVMHVEGKDKAQRFMKNIREFMNLMGTFTVADGVPCLRW 247          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 98/220 (44.55%), Postives = 137/220 (62.27%), Query Frame = 1
Query:  166 KRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWF 822
            + GPP   GAWP+IGHL LL G    H+ LGD+ADKYGPIF+I++G   A+VVSNWEMAKEC TT+D   +S P  + A +L +N SM   +PYGP+WRQ+RKI   E LS  R+E+L HVR  EV++ + EL+  W    N +S          VE+ +WF  +  N ILR+  G+R  S+S+ +D +      + + +F   +  F V D++P+LRWF
Sbjct:   34 EEGPPTVAGAWPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSG------FATVELKQWFSLLVFNMILRMVCGKRYFSASTSDD-EKANRCVKAVDEFVRLAATFTVGDAIPYLRWF 246          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.634e-47
Identity = 95/229 (41.48%), Postives = 144/229 (62.88%), Query Frame = 1
Query:  148 YASNKKKRGP----PEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW 819
            Y   KK  G     P  GGAWP+ GHL LL G    H+ LG +A+K+GP+FTI++G  +ALVVS+WEMA+EC TT+D   ++RPK LVAE++ +N +M   +PYGP+WR++RKI   E+LS+ R+E+L+ VR  EV+  + ELY+ W        S  N +    VE+ +WF     N +LR+ VG+R  S+++ ++   +    + + +F   +G F V D++P+LRW
Sbjct:   27 YGPLKKVHGSSKEAPTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWR-------SQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCV--KAVDEFMRLAGVFTVGDAIPYLRW 246          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.821e-29
Identity = 76/223 (34.08%), Postives = 118/223 (52.91%), Query Frame = 1
Query:  148 YASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFS-GKFVVSDSLPFL 813
            + S + +R PP     WP+IG+ H + R PLHR L ++A+KYGPI  +R G    +VVS+ E AK  L THD +FASRP   V +   +NF    FSPYG HWR++RKI  LELL++ R+E  KHVR+ E+   +  ++E             + + ++ V ++K       N + R+   ++     S  D   +G    +L    + + G   + D +P+L
Sbjct:   34 HQSQRNERLPP-GPYPWPIIGNFHQV-RLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWE------------ESESGRIAVNVSKAISTSLANILWRILARKK----FSDNDLGADGKGFADLVVEVSIAVGSLNIGDFIPYL 238          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.298e-29
Identity = 72/218 (33.03%), Postives = 120/218 (55.05%), Query Frame = 1
Query:  172 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLT-THDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWF 822
            GPP      P +GHLHL+ + P+HR+L   +++YGPIF++R G  R +V+++  +A+E  T  +D V +SRP  L A+ + +N +  G +PYG HWR +R+I + E+LS+HRL   +H+R+ E+   L  L  + + +N      H       +E+     D+T N I+R+  G+R          + E  +K+ +     +SG    +D LP L+ F
Sbjct:   31 GPPSR----PFVGHLHLM-KPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTH-------IELEPLLSDLTFNNIVRMVTGKRYYGDDVNNKEEAE-LFKKLVYDIAMYSGANHSADYLPILKLF 235          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.083e-25
Identity = 69/222 (31.08%), Postives = 109/222 (49.10%), Query Frame = 1
Query:  163 KKRGP---PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW 819
            +KR P   P     WP+IG+L  LG  P H+    MA  YGP+  ++MG    +V ++  +A + L THD  F+SRP    AE + +N+    F+PYGP WR +RKI ++ L S   L+  +HVR+ EVKT  + L    ++                V++ +     T N + RV +G+R  +  S +       +K  + +    +G F + D +P L W
Sbjct:   26 RKRYPLPLPPGPKPWPIIGNLVHLGPKP-HQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRALASAGQKP---------------VKLGQLLNVCTTNALARVMLGKRVFADGSGDVDPQAAEFKSMVVEMMVVAGVFNIGDFIPQLNW 231          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.721e-25
Identity = 67/221 (30.32%), Postives = 118/221 (53.39%), Query Frame = 1
Query:  172 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQR-----CNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW 819
            GPP      P+IG+LH L R PLHR    +++KYG +F++  G    +VVS+    ++C T +D V A+RP+ L  + + +N++  G + YG HWR +R+I  L++LSNHR+     +R  E +  +  L            +D ++     +E++    D+T N I+R+  G+R     C++S  QE +     +++ +++    SG    +D +P LR+
Sbjct:   35 GPPSL----PIIGNLHHLKR-PLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRL------------ADDSSTNFAEMELSSRLYDMTFNNIMRMISGKRYYGEDCDTSDLQEASQ----FRDMVSELLQLSGANNKTDFMPLLRF 234          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.641e-25
Identity = 65/219 (29.68%), Postives = 120/219 (54.79%), Query Frame = 1
Query:  163 KKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW 819
            KK   P +    P+IG+LH LGR P HR L  ++++YGP+  +R G+   LVVS+ ++A++ L T+DRVFASRP++ + E + +       +PYG +WRQ++ +  L LL+N  +   ++VR+ E+   ++++                 +  + V +++    +T + I RV +G++ +     ++TD    +KE + +     G+F V   +P+L W
Sbjct:   28 KKSNTPASPPRLPLIGNLHQLGRHP-HRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKI---------------QKSSSLQVNLSELLGSLTNDVISRVALGRKYS-----DETD----FKELMKRLTKLLGEFCVGTYVPWLAW 221          
BLAST of FC878755 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.061e-25
Identity = 65/219 (29.68%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  163 KKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYEFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNTILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW 819
            KK   P +    P+IG+LH LG  P HR L  ++ +YGP+  + +G    LVVS+ ++A++ L THDRVFASRP++ + E L ++     F+PYG +WRQI+ +  L LLSN  +   ++VR+ E+   ++++                 +  + V +++    +T + I R+ +G++ +  +           KE + +     G+F V   +P+L W
Sbjct:   28 KKSNTPRSPPRLPLIGNLHQLGHHP-HRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKI---------------QKSSSLQVNVSELLGSLTNDVISRIALGRKYSGETDS---------KELMKRLMMLMGEFSVGTYVPWLGW 221          
The following BLAST results are available for this feature:
BLAST of FC878755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
C82A1_PEA4.454e-5243.86Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C82A3_SOYBN2.210e-5141.78Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C82A2_SOYBN1.341e-4844.55Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C82A4_SOYBN5.634e-4741.48Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C75A1_PINTA1.821e-2934.08Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C81F1_ARATH5.298e-2933.03Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
F3PH_PETHY2.083e-2531.08Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C81E1_GLYEC2.721e-2530.32Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71AM_ARATH4.641e-2529.68Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH6.061e-2529.68Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA55AD05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AD05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878755 ID=FC878755; Name=FC878755; organism=Citrus clementina; type=EST; length=824bp
TGCATGCATATTATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGC
GGCGATGGCCTTTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAA
CCCTTATAATCTTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTAC
GCAAGCAATAAGAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCC
TGTGATTGGGCATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGT
TGGGAGACATGGCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGC
GTACATCGCGCTTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCT
CACTACACATGACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAG
AGATATTAGGCTTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCC
CATTGGCGCCAGATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCA
TCGGCTTGAGAAGCTCAAGCATGTTCGAGAAGGCGAGGTAAAGACTTGTT
TGAAGGAGTTATATGAGTTTTGGGAACGTACGAACAATTACAAAAGTTCG
GATCATAATAACAACAAGAAGGTATTGGTGGAGATGAACAAATGGTTTGA
GGATGTAACCCTTAATACGATCTTAAGGGTAACGGTTGGACAAAGATGCA
ATTCATCATCATCACAAGAGGATACCGATCATGAAGGAGCATGGAAAGAG
GAATTGACCAAATTTTTTGCATTTAGTGGTAAGTTCGTGGTGTCAGATTC
GCTGCCGTTTTTGAGATGGTTTGA
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