FC878756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878756 vs. ExPASy Swiss-Prot
Match: CCD55_RAT (Coiled-coil domain-containing protein 55 OS=Rattus norvegicus GN=Ccdc55 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.118e-25 Identity = 76/221 (34.39%), Postives = 115/221 (52.04%), Query Frame = 3 Query: 246 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEK---EVDKKAEQRRPEKEEIQRAADTPEKERLSAYSNSAAESSRGKEG 893 V + R+A K +A+++ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKLEE+ + + R DVTK+ D+S FY +L N A G + + V K EK D+ + RP++ ++ +E A S+S G+ G Sbjct: 40 VSESLQREAAKKQAMRQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEENNPKLLMGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEARLDVTKQKDLSGFYRHL-LNQAVGEEAVPKSSFREARTVIKEEKLRGYPDETNSENRPQQNCALQSGVEEAEENPDADSDSEESCDDGERG 259
BLAST of FC878756 vs. ExPASy Swiss-Prot
Match: CCD55_MOUSE (Coiled-coil domain-containing protein 55 OS=Mus musculus GN=Ccdc55 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.073e-25 Identity = 74/210 (35.24%), Postives = 112/210 (53.33%), Query Frame = 3 Query: 246 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEK----EVDKKAEQRRPEKEEI-----QRAADTPEKER 842 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E+ F DKE FVT AYKKKLEE+ + + DVTK+ D+S FY +L N A G + + V K EK + +E R P++ + Q A + P+ +R Sbjct: 40 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSVYDEMQKKKEENNPKLLPGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMENGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEAHLDVTKQKDLSGFYRHL-LNQAVGEEAAPKSSFREARTVIKEEKLRGYPDETNSESRPPQQSCVLQRGAQEAEENPDADR 248
BLAST of FC878756 vs. ExPASy Swiss-Prot
Match: CCD55_BOVIN (Coiled-coil domain-containing protein 55 OS=Bos taurus GN=CCDC55 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.947e-25 Identity = 77/220 (35.00%), Postives = 114/220 (51.82%), Query Frame = 3 Query: 246 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKE---VDKKAEQRRPEKEEIQRAADTPEKERLSAYSNSAAESSRGKE 890 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKL+E+ + + R DVTK+ D+S FY +L N A G + + + K EK D+ + + R E R +E A S+ A+SS E Sbjct: 42 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEERERRAAALEARLDVTKQRDLSGFYRHL-LNQAVGEEEVPTCSFREARSEIKEEKSKGYSDEVSSESRIPPENCIRQTGVKVEENPDADSDFDAKSSENDE 260
BLAST of FC878756 vs. ExPASy Swiss-Prot
Match: CCD55_HUMAN (Coiled-coil domain-containing protein 55 OS=Homo sapiens GN=CCDC55 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 80/224 (35.71%), Postives = 117/224 (52.23%), Query Frame = 3 Query: 246 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKL----EEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKE---VDKKAEQRRPEKEEIQRAADTPEKERLSAYSNSAAESSRGKE 890 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKL EE++R R AL DVTK+ D+S FY +L N A G + + K EK ++ + + R +E+ D +E A S+ A+SS E Sbjct: 41 VSESLQREAAKKQAMKQTKLEIQKALAEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKRAAALEACL----DVTKQKDLSGFYRHL-LNQAVGEEEVPKCSFREARSGIKEEKSRGFSNEVSSKNRIPQEKCILQTDVKVEENPDADSDFDAKSSADDE 259
BLAST of FC878756 vs. ExPASy Swiss-Prot
Match: CCD55_DANRE (Coiled-coil domain-containing protein 55 OS=Danio rerio GN=ccdc55 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 8.492e-23 Identity = 69/225 (30.67%), Postives = 120/225 (53.33%), Query Frame = 3 Query: 258 ISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVR--RKVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFN-LHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPEKE--------EIQRAADTPEKERLSAYSNSAAESSRGKEGHQ 899 + ++AIK + +K+ + +KAL ED V++YD YD+++++ + +K+ D +PKYI++L+ +ERK+E + ERK+ KER E FADKE FVT AY++KL+E+Q + + DV K+ D+S FY + L++ V + + D+ A+ EK A +R P E E + +D + + A+S + A + ++ Q Sbjct: 43 LQKEAIKKKMMKQTRLEMQKALEEDSTVYEYDNVYDDIQKQRLESNKKLLGGEDKKPKYINQLLRAVEERKKEQERRDERKIQKEREAEGEKFADKEAFVTSAYRQKLKERQEELEREKREAELEAALDVKKQKDLSGFYRHFLNQTVG------EEVVPDRSAQ--SEEKATSSAAAERSPSPESTANRRESEAESHSDDDQVDVKPAFSKTTANNHAKRQYRQ 259
BLAST of FC878756 vs. ExPASy Swiss-Prot
Match: CCD55_CAEEL (Coiled-coil domain-containing protein 55 homolog OS=Caenorhabditis elegans GN=ccdc-55 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.698e-16 Identity = 66/210 (31.43%), Postives = 100/210 (47.62%), Query Frame = 3 Query: 282 RALKEIEEQQRKALAEDPNVFDYDGCYDEMKQ-KSVRRKVQDRADT--QPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPEKEEI----QRAADTP-EKERLSAYSNSAAESSRGK 887 R K E + +KA AEDP +FDYDG YDE++ K+ +++ +AD + KY +I R+ E ER+ +ER KE F DKE FVTGAY+K+ EE ++ ++A ++ V K+ K G G +L + K K+ K +R EEI +++ P EK + S YS+ + E K Sbjct: 51 RVQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNRESKYAENIIKAHARRQLEQFSREERQQLREREKEGDEFDDKEVFVTGAYRKQQEEVKKHREQEAEEAAFNDMTSVQKQ-----------KLWEIGMGRTLLNDLARDPTAIKQRKKEQKNVRKREDSDEEIDPKPEKSDKKPAEKLKKSIYSDDSDEEKAPK 249
BLAST of FC878756 vs. ExPASy Swiss-Prot
Match: CCD55_CAEBR (Coiled-coil domain-containing protein 55 homolog OS=Caenorhabditis briggsae GN=ccdc-55 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.715e-15 Identity = 60/189 (31.75%), Postives = 91/189 (48.15%), Query Frame = 3 Query: 282 RALKEIEEQQRKALAEDPNVFDYDGCYDEMKQ-KSVRRKVQDRADT--QPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPEKEEIQRAADTPEKE 839 R K E + +KA AEDP +FDYDG YDE++ K+ +++ +AD + KY +I R+ E ER+ KER KE F DKE FVTGAY+K+ EE +++ ++A ++ V K+ K G G +L + K K K +R +E ++ D +KE Sbjct: 51 RIQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNKESKYAEAIIKAHARRQLEQFSREERQQIKEREKEAGEFDDKEVFVTGAYRKQQEEVKKYREQEAEEAAFNDMTSVQKQ-----------KMWEMGMGRTLLNDLARDPTAIKQRKMEKKNVRKREDSGDEEEQKEDVKKKE 228 The following BLAST results are available for this feature:
BLAST of FC878756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878756 ID=FC878756; Name=FC878756; organism=Citrus clementina; type=EST; length=901bpback to top |