FC878760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878760 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14 Identity = 49/149 (32.89%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 141 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNG-DDCKNK---KKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFL 572 +FL VP +++ ++ V + DV I++++ L R+Y P + D +N + +P+I+ FHGG F S A+ +Y + +L A+ VSV RRAPE+R P A+DDG+ L W+ S ++WL D + R+FL Sbjct: 47 EFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS----------SSWLRSKKDSKVRIFL 185
BLAST of FC878760 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 50/149 (33.56%), Postives = 70/149 (46.98%), Query Frame = 3 Query: 141 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGD-----------------DCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRS----LSLAQAQAR 524 ++L VP ++ ++ V++ D I++ GL VRIY GD D + P+I+ FHGG F S A +Y + + K + VSV RRAPEHR P A+DDG+ AL W+ S S AQAR Sbjct: 47 EYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAA----EGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQAR 191
BLAST of FC878760 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.796e-12 Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 3 Query: 99 DGSVDRTWTGPPEVKFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKK-------LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRS 497 DGS +R +FL VP +S +D V + D ++ + L RIY P + K +P+++ FHGG F S A+ +Y +L + VSV RR+PEHR P A+DDG+ AL W++S Sbjct: 38 DGSFNRDLA-----EFLDRKVPANSFPLDGVFSFD-HVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS 171
BLAST of FC878760 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11 Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 3 Query: 141 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKK------LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLS 503 ++L V +++ +D V + DV I++ L R+Y P + + +K +P+IL FHGG F S A+ +Y + +L + VSV RRAPE+ P A+DDG+ AL W+ S S Sbjct: 47 EYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS 173 The following BLAST results are available for this feature:
BLAST of FC878760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878760 ID=FC878760; Name=FC878760; organism=Citrus clementina; type=EST; length=574bpback to top |