FC878767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACO1_AJECA (Acyl-CoA desaturase OS=Ajellomyces capsulata GN=OLE1 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.033e-52 Identity = 94/135 (69.63%), Postives = 107/135 (79.26%), Query Frame = 3 Query: 180 RNKSYDPKKPHITDTPLTKANWYKHVNWLNVFLIGGIPLMGLIQAWWTPLRLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 R + +PKK HITDTP+T ANW+KH++WLNV LI IP+ GL+QA+W PL L TA+WA+ YYF TGLGITAGYHRLWAH SY ATLPLKI+LAAVGGGAVEGSI YTDT+KDPYSVRKGLLYSH Sbjct: 28 RRPNSEPKKVHITDTPITLANWHKHISWLNVTLIIAIPIYGLVQAYWVPLHLKTALWAVVYYFMTGLGITAGYHRLWAHCSYSATLPLKIYLAAVGGGAVEGSIRWWARGHRAHHRYTDTDKDPYSVRKGLLYSH 162
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACO1_SCHPO (Probable acyl-CoA desaturase OS=Schizosaccharomyces pombe GN=SPCC1281.06c PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 6.468e-34 Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 3 Query: 186 KSYDPKKP-HITDTPLTKANWYKHVNWLNVFLIGGIPLMGLIQAWWTPLRLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 + +DPK P HI + P T NW++H+NWL+ LI G+P++ + + TPL+ T I+AI YY +GLGITAGYHRLW+H +Y+A PL+ FLAA G A EGSI YTDT+KDPY+V+KG Y+H Sbjct: 38 RKWDPKAPKHIQEQPWTMQNWWRHLNWLHCMLIFGLPMIAIYGVFTTPLQTKTLIFAIIYYAYSGLGITAGYHRLWSHRAYKAKKPLEYFLAAGGAAAFEGSIRWWSRDHRAHHRYTDTDKDPYNVKKGFWYAH 171
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACO1_YEAST (Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae GN=OLE1 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 168 DEPNRNKSYDPKKPHITDTPLTKANWYKHVNWLNVFLIGGIPLMGLIQAWW------TPLRLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 ++ N+ K K HI++ P T NW++H+NWLN+ L+ G+P++G W+ PL L ++++ YY G+ ITAGYHRLW+H SY A PL++F A G +VEGS YTDT +DPY R+GL YSH Sbjct: 82 EKDNQEKEEAKTKIHISEQPWTLNNWHQHLNWLNMVLVCGMPMIG----WYFALSGKVPLHLNVFLFSVFYYAVGGVSITAGYHRLWSHRSYSAHWPLRLFYAIFGCASVEGSAKWWGHSHRIHHRYTDTLRDPYDARRGLWYSH 222
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: SCD5_BOVIN (Stearoyl-CoA desaturase 5 OS=Bos taurus GN=SCD5 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.082e-16 Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 261 WLNVFLIGGIPLMGLIQAWWTP-LRLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 W NVFL+ + L + P + T +WA + T LG+TAG HRLW+H SY+A LPL+IFLAA A + I Y++T+ DP++ R+G +SH Sbjct: 52 WRNVFLMSLLHLAAVYSLVLIPKAQPLTLLWAYFCFLLTALGVTAGAHRLWSHRSYKAKLPLRIFLAAANSMAFQNDIFEWSRDHRVHHKYSETDADPHNARRGFFFSH 160
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACOD_SHEEP (Acyl-CoA desaturase OS=Ovis aries GN=SCD PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.082e-16 Identity = 48/163 (29.45%), Postives = 78/163 (47.85%), Query Frame = 3 Query: 99 QPAAGMMAVDPAYVSQPSPMASKDEPNRNKSYDPKKPHITDTPLTKANWYKHVNWLNVFLIGGIPLMGLIQAWWTPL-RLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 Q G + P Y+ + +D+ YDP + P K + W N+ L+G + L L P ++YT +W + YY + LGITAG HRLW+H +Y+A LPL++FL A + + +++T+ DP++ R+G +SH Sbjct: 29 QNGGGKLEKTPLYLEEDIRPEMRDD-----IYDPNYQD-KEGPKPKLEYV----WRNIILMGLLHLGALYGITLIPTCKIYTFLWVLFYYVISALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSH 181
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACOD_CAPHI (Acyl-CoA desaturase OS=Capra hircus GN=SCD PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.082e-16 Identity = 48/163 (29.45%), Postives = 78/163 (47.85%), Query Frame = 3 Query: 99 QPAAGMMAVDPAYVSQPSPMASKDEPNRNKSYDPKKPHITDTPLTKANWYKHVNWLNVFLIGGIPLMGLIQAWWTPL-RLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 Q G + P Y+ + +D+ YDP + P K + W N+ L+G + L L P ++YT +W + YY + LGITAG HRLW+H +Y+A LPL++FL A + + +++T+ DP++ R+G +SH Sbjct: 29 QNGGGKLEKTPLYLEEDIRPEMRDD-----IYDPTYQD-KEGPKPKLEYV----WRNIILMGLLHLGALYGITLIPTCKIYTFLWVLFYYMMSALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSH 181
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACOD_PIG (Acyl-CoA desaturase (Fragment) OS=Sus scrofa GN=SCD PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.943e-16 Identity = 49/163 (30.06%), Postives = 77/163 (47.24%), Query Frame = 3 Query: 99 QPAAGMMAVDPAYVSQPSPMASKDEPNRNKSYDPKKPHITDTPLTKANWYKHVNWLNVFLIGGIPLMGLIQAWWTPL-RLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 Q G P YV + KD+ YDP + P K + W N+ L+ + L L P ++YT +WA AYY + +G+TAG HRLW+H +Y+A LPL++FL A + + +++T+ DP++ R+G +SH Sbjct: 18 QNGGGKSEKTPQYVEEDIRPEMKDD-----IYDPTYQD-KEGPQGKLEYV----WRNIILMSLLHLGALYGIILIPTCKIYTLLWAFAYYLLSAVGVTAGAHRLWSHRTYKARLPLRVFLIIANTMAFQNDVYEWARDHRAHHKFSETDADPHNSRRGFFFSH 170
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACOD_HUMAN (Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15 Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 261 WLNVFLIGGIPLMGLIQAWWTPL-RLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 W N+ L+ + L L P + YT +W + YYF + LGITAG HRLW+H SY+A LPL++FL A + + +++T DP++ R+G +SH Sbjct: 73 WRNIILMSLLHLGALYGITLIPTCKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSH 181
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACOD1_MOUSE (Acyl-CoA desaturase 1 OS=Mus musculus GN=Scd1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.725e-15 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 261 WLNVFLIGGIPLMGLIQAWWTP-LRLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 W N+ L+ + L GL P +LYT ++ I YY + LGITAG HRLW+H +Y+A LPL+IFL A + + +++T DP++ R+G +SH Sbjct: 69 WRNIILMVLLHLGGLYGIILVPSCKLYTCLFGIFYYMTSALGITAGAHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSH 177
BLAST of FC878767 vs. ExPASy Swiss-Prot
Match: ACOD_BOVIN (Acyl-CoA desaturase OS=Bos taurus GN=SCD PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.147e-14 Identity = 48/163 (29.45%), Postives = 76/163 (46.63%), Query Frame = 3 Query: 99 QPAAGMMAVDPAYVSQPSPMASKDEPNRNKSYDPKKPHITDTPLTKANWYKHVNWLNVFLIGGIPLMGLIQAWWTPL-RLYTAIWAIAYYFATGLGITAGYHRLWAHTSYQATLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTEKDPYSVRKGLLYSH 584 Q G + P Y+ + +D+ YDP + P K + W N+ L+ + L L P ++YT IW + YY LGITAG HRLW+H +Y+A LPL++FL A + + +++T+ DP++ R+G +SH Sbjct: 29 QNGGGKLEKTPLYLEEDIRPEMRDD-----IYDPTYQD-KEGPKPKLEYV----WRNIILMSLLHLGALYGITLIPTCKIYTYIWVLFYYLMGALGITAGAHRLWSHRTYKARLPLRVFLIIGNTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSH 181 The following BLAST results are available for this feature:
BLAST of FC878767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878767 ID=FC878767; Name=FC878767; organism=Citrus clementina; type=EST; length=584bpback to top |