FC878772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_PROVI (Homoserine kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=thrB PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29 Identity = 86/206 (41.75%), Postives = 112/206 (54.37%), Query Frame = -2 Query: 273 AFNEMFGNKLLPDELVLAGLESEAKVSGY-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAFW-KEGNLKAVSMVKRLDRVGARLV 884 A NE+ G ELV +E E G HADN APAI+G FVLIRSY PLDL+ + PEK L LV P E T R+ LP ++ + GALVA +L D +G++L D + EPKRAPLIPG AGA GC+I+G+GP+ A D+ E GE M +AF + +LK+ V + R GAR++ Sbjct: 118 AANELLGRPCTKMELVHFAIEGERVACGSAHADNAAPAILGNFVLIRSYTPLDLIVIPPPEK--LFCSLVHPHTELRTSFARSVLPTDITLKDATRQWGNVGALVAGLLTSDYALVGRSLV-DVVAEPKRAPLIPGFAEVKEAALNAGALGCSIAGSGPSIFAFSDSAETAHAAGEAMQKAFLASKKSLKSDMWVSPICREGARIL 320
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_CHLPD (Homoserine kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=thrB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29 Identity = 83/206 (40.29%), Postives = 111/206 (53.88%), Query Frame = -2 Query: 273 AFNEMFGNKLLPDELVLAGLESEAKVSGY-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAF-WKEGNLKAVSMVKRLDRVGARLV 884 A NE+ G ELV +E E G HADN APAI+G FVLIRSY PLDL+ + PE L LV P E T R+ LP + + GAL+A +L D +G+AL D + EPKRAPLIPG GA GC+I+G+GP+ A ++E + +G+ M EAF E NLK+ V + + GA+++ Sbjct: 118 AANELLGQPCSKMELVHFAVEGERVACGSAHADNAAPAILGNFVLIRSYAPLDLITIPSPE--HLFCTLVHPHTELKTSFARSVLPRSIPLKTATQQWGNVGALIAGLLKSDYDLIGRALV-DVVAEPKRAPLIPGFLDVKHAAIDCGALGCSIAGSGPSVFAFSSSKETAERVGQAMREAFLLPETNLKSDMWVSPICKEGAKVL 320
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_CHLTE (Homoserine kinase OS=Chlorobium tepidum GN=thrB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.528e-27 Identity = 79/208 (37.98%), Postives = 109/208 (52.40%), Query Frame = -2 Query: 267 AFNEMFGNKLLPDELVLAGLESEAKVSGY-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAF-WKEGNLKAVSMVKRLDRVGARLVGS 884 A NE+FG+ ELV +E E G HADN APA++G F+LIRSY PLDL+ + P K L LV P E T R+ LP + + GAL+A +L D +G+AL D + EPKRAPLIPG AGA GC+I+G+GP+ A + + + +G M AF L++ V + GAR++ + Sbjct: 118 AANELFGSPCTKMELVHFAIEGERVACGSAHADNAAPAMLGNFILIRSYNPLDLITIKPP--KNLFGTLVHPHTELKTSFARSVLPKSIPLSTATQQWGNVGALIAGLLMEDYDLIGRALV-DVVAEPKRAPLIPGFNEVKQAALDAGALGCSIAGSGPSVFAFSSSRQTAEAVGSAMQSAFLHSRAALQSDMWVSPICSQGARIIST 322
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_CHLT3 (Homoserine kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=thrB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.231e-26 Identity = 78/205 (38.05%), Postives = 110/205 (53.66%), Query Frame = -2 Query: 273 AFNEMFGNKLLPDELVLAGLESEAKVSG-YHADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAFWKEGNLKAVSMVKRLDRVGARLV 884 A N + G+ ELV +E E G HADN APA++G F+L RSY+PLDL+ ++ P +L LV P E PT R+ L E+ + + GALVA +L D +G+AL D + EP RAPLIPG AGA G +I+G+GP+ A D+ K + I + M E F K NL++ + R G+R++ Sbjct: 118 AANSLLGSPCTKMELVPFVMEGERIACGSIHADNAAPAMLGNFILTRSYDPLDLIPISTPP--ELYCSLVHPHIEVPTSHARSILKKEIALSSAVRQWGNVGALVAGLLRCDYELIGRALE-DVVAEPVRAPLIPGFYDVKHAALDAGALGGSIAGSGPSIFAFSDSLAKAETIAKAMQETFRKVSNLESDIWFCPVSREGSRIL 319
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_CHLPB (Homoserine kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=thrB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.033e-25 Identity = 73/182 (40.11%), Postives = 96/182 (52.75%), Query Frame = -2 Query: 342 AFNEMFGNKLLPDELVLAGLESEAKVSGY-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAF 884 A NE+ G ELV +E E G HADN APA++G FVLIRSY P+DL+ + P+ L LV P E T R+ LP + + GAL++ +L D +G++L D I EPKRAPLIPG AGA GC+I+G+GP+ A + E +GE M AF Sbjct: 118 AANELMGRPCNKMELVNFAIEGERVACGSAHADNAAPAMLGNFVLIRSYNPIDLITIPSPDN--LYCTLVHPHIEVRTAYARSVLPRMISLKTATEQWGNVGALISGLLTSDYELIGRSLV-DVIAEPKRAPLIPGFYDVKHAALEAGAIGCSIAGSGPSIFAFSSSPETASRVGEAMQTAF 296
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_PYRHO (Homoserine kinase OS=Pyrococcus horikoshii GN=thrB PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20 Identity = 71/188 (37.77%), Postives = 101/188 (53.72%), Query Frame = -2 Query: 291 DELVL-AGLESEAKVSGY-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAFWKEGNLKAVSMVKRLDR 848 DEL+L A ++ E K SG H DN+ P+ GGF +I S PL R++F + K L V+V PE E PT K R LP+ V + + N + A +L+ A+ GD +G+ L D + P R L+P GAYG T+SG+GP A+ +N K IG+ +VE F +E +KA V + R Sbjct: 111 DELILKAAMKGEEKASGEPHPDNVVPSYYGGFTVIESKSPL---RVHFVDAK-LRGVVVLPEVEIPTAKARKILPSMVPLKDAVKNIAMASSLILALKEGDLETIGRLL-DDNLALPYRKKLMPWFDEIRRVALETGAYGITVSGSGPALFAIGENL---KDIGKTIVEKF-EELGIKAEYWVTKTGR 289
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_METMP (Homoserine kinase OS=Methanococcus maripaludis GN=thrB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.548e-20 Identity = 66/168 (39.29%), Postives = 87/168 (51.79%), Query Frame = -2 Query: 384 AFNEMFGNKLLPDELVLAGLESEAKVSGY-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNE 884 A NE+F KL ELV EA +G HADN+APAI GGF L SYEPL++ L+ P ++L L P + TK R LP E+ + + N +A +V A+ N D G+ +S D +VEP RA LI G YG TISG+GP + + E Sbjct: 107 ALNELFELKLSKLELVKYSSLGEAVAAGAPHADNVAPAIFGGFTLTTSYEPLEV--LHIPVDLEVLVAL--PNIQVSTKTAREILPKEIPIKDMVNNVGKAAGMVYALYNNDLDLFGRYMSKDCVVEPCRANLIDGYTEVKEKVKDM-VYGITISGSGPAIITIPKKE 269
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_METM5 (Homoserine kinase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=thrB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.548e-20 Identity = 65/168 (38.69%), Postives = 88/168 (52.38%), Query Frame = -2 Query: 384 AFNEMFGNKLLPDELVLAGLESEAKVSGY-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNE 884 A NE+F KL ELV EA +G HADN+APAI GGF L SY+PL++ L+ P ++L L P + TK R LP E+ + + + N +A +V A+ N D G+ +S D +VEP RA LI G YG TISG+GP + + E Sbjct: 107 ALNELFELKLSKLELVKYSSLGEAVAAGAPHADNVAPAIFGGFTLTTSYDPLEV--LHIPVDIEVLVAL--PNIQVSTKTAREILPKEIPIKYMVNNVGKAAGMVYALYNNDLELFGRYMSKDCVVEPCRANLIDGYAEVKEKVKDL-VYGITISGSGPAIITIPKKE 269
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_METVS (Homoserine kinase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=thrB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19 Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = -2 Query: 384 NEMFGNKLLPDELVLAGLESEAKVSGY-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNE 878 NE+F KL +LV EA +G HADN+APAI GGF L +YEPL+++ + ++ ++ P + TK R LP EV M + N +A ++ A+ N D G+ +S D +VEP RA LI G YG TISG+GP +A+ E Sbjct: 110 NELFELKLSKLDLVKYASLGEAVAAGAPHADNVAPAIFGGFTLTTNYEPLEVLHIPV----EIDVIVALPNIQVSTKSAREILPKEVPMKSMVNNVGKAAGMIYALYNNDLDLFGQYMSKDAVVEPCRAQLITGYLEIKEKLKDL-VYGVTISGSGPAIIAIPKKE 270
BLAST of FC878772 vs. ExPASy Swiss-Prot
Match: KHSE_METJA (Homoserine kinase OS=Methanocaldococcus jannaschii GN=thrB PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19 Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = -2 Query: 384 AFNEMFGNKLLPDELVLAGLESEAKVSGY---HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAALPAEVGMPHHIWNCSQAGALVAAVLNGDPVGLGKALSSDKIVEPKRAPLIPGMXXXXXXXXXAGAYGCTISGAGPTAVAVVDNE 884 A NE+F KL D+L L S +++ HADN+APAI GGF ++ +YEPL+++ + K +L + P TK+ R LP VG+ + N +A +V A+ N D G+ + SDK++EP R LIP YG TISG+GP+ +A E Sbjct: 104 AINELF--KLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAI--PNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEEVKDK-VYGITISGSGPSIIAFPKEE 268 The following BLAST results are available for this feature:
BLAST of FC878772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 191
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878772 ID=FC878772; Name=FC878772; organism=Citrus clementina; type=EST; length=885bpback to top |