FC878774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: ANTR4_ARATH (Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 3.024e-44 Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQ 323 LA RA+VG+AEGVALP MNNMVARWFP TER+RAV IAM GF GN +GL+LSPILMSQ GI+GPFVIFGLSGFLW+LVWLSATSS PDRHPQI+K ELEYI ++KQ Sbjct: 207 LAARAMVGVAEGVALPCMNNMVARWFPPTERSRAVGIAMAGFQLGNVVGLMLSPILMSQGGIYGPFVIFGLSGFLWLLVWLSATSSAPDRHPQITKSELEYIKQKKQ 313
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: PHT43_ORYSJ (Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.741e-37 Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILR 314 L+ R ++G+AEGVALP+MNNMV RWFP+TER+ AV IAM GF GN IGL+LSPI+MS+AGIFGPFVIFGL GFLWVLVW+SA S TP + QIS +EL+YI R Sbjct: 193 LSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQISAHELDYITR 296
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: ANTR3_ARATH (Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 5.362e-25 Identity = 56/126 (44.44%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQ-KPLLMGNKHKPATVIHLS 377 L +RA GLAEGVA+P+M +++RWFP ERA AV I+M GF GN +GL+L+P+++S GI GPF++F G LWV W S ++ P P I++ EL I K +P + K P+ + LS Sbjct: 194 LCVRAFFGLAEGVAMPSMTTLLSRWFPMDERASAVGISMAGFHMGNVVGLLLTPLMLSSIGISGPFILFASLGLLWVSTWSSGVTNNPQDSPFITRSELRLIQAGKPVQPSTISPKPNPSLRLLLS 319
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: PHT42_ORYSJ (Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.843e-23 Identity = 54/115 (46.96%), Postives = 70/115 (60.87%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNK 347 LA+RA+ GLAEGVA P M+ + +WFP ERA AV I+MGGF GN I + +PI+MS G+ G F F G+LW+ VWL S P ISK EL+ IL + + G+K Sbjct: 218 LAIRALFGLAEGVAFPTMSTFLPKWFPTHERATAVGISMGGFHLGNVISFLATPIIMSHIGLAGTFAFFASLGYLWLSVWLFNVESDPLDSRTISKSELQLILAGRSASKIQGSK 332
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: PHT44_ORYSJ (Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.157e-19 Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL 311 L MRA +G+ EGVA+PAMNN++++W P +ER+R++A+ G G+ GL SP+L+S+ G F FG G +W +W S+P P++SK E YIL Sbjct: 277 LVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFALWQRKAHSSPSEDPELSKAEKRYIL 379
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: ANTR2_ARATH (Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.577e-19 Identity = 49/123 (39.84%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNK-HKPATVI 368 L +RA +G+ EGVA+PAMNNM+++W P +ER+R++A+ G G+ GL SP+L+++ G F FG G +W L+WL S+P P +S+ E++K +L G+K +P TVI Sbjct: 227 LVVRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPMLITKFGWPSVFYSFGSLGSIWFLLWLKFAYSSPKDDPDLSE--------EEKKVILGGSKPREPVTVI 341
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: ANTR1_ARATH (Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.484e-16 Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYI 308 L +RA +G+ EGVA+PAMNN++++W P ER+R++A+ G G+ GL SP L+ Q G F FG G +W+ +WL+ S+P P + E + I Sbjct: 198 LVVRAFMGVGEGVAMPAMNNILSKWVPVQERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWLTLWLTKAESSPLEDPTLLPEERKLI 299
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: S17A5_HUMAN (Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.550e-16 Identity = 43/110 (39.09%), Postives = 59/110 (53.64%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPL 332 + +RA+ GL EGV PAM+ M + W P ER++ ++I+ G G I L LS I+ F FG G W L+W+ S TP +H +IS YE EYIL + L Sbjct: 165 IVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVISLPLSGIICYYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILSSLRNQL 274
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: S17A5_SHEEP (Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.942e-16 Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPL 332 +A+RA+ GL EGV PAM+ M + W P ER++ ++I+ G G + L LS ++ F FG+ G +W ++W+ S TP+ H I+ YE EYIL + L Sbjct: 165 VALRALEGLGEGVTYPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVVSLPLSGVICYYMNWTYVFYFFGIVGIIWFILWICLVSDTPETHKTITPYEKEYILSSLKNQL 274
BLAST of FC878774 vs. ExPASy Swiss-Prot
Match: PHT41_ORYSJ (Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 3 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYI 308 L RA +G+ EGVA+PAMNN++++W P +ER+R++A+ G G+ GL SP+L+ G F FG G W W S S+P P IS E + I Sbjct: 215 LVTRAFMGVGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWASKAYSSPLEDPGISAEEKKLI 316 The following BLAST results are available for this feature:
BLAST of FC878774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878774 ID=FC878774; Name=FC878774; organism=Citrus clementina; type=EST; length=386bpback to top |