FC878775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878775 vs. ExPASy Swiss-Prot
Match: TTC15_HUMAN (Tetratricopeptide repeat protein 15 OS=Homo sapiens GN=TTC15 PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25 Identity = 89/292 (30.48%), Postives = 140/292 (47.95%), Query Frame = 3 Query: 114 LQDLATRGSWRTIIDNVSRARS--------QSLLTQPHHHLTYLAYNTLALM-KLRRFDEAQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWLYAVLPIKLSNRQVGLDRFYELLDFVREKLARKLAEKLEE--------------SVKSWKKREIFVLNCLIGYHLSSKEYNVCFDLMNESIGRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEMLNEGKFEDGLLSEVEFRNLVSRNKALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALCLMYL 920 L+ L + +WR +D R + LLT L + LAL+ KL F A+ E + + + YE YPH+YP R GSMVPFS+R L+A L L N Q LDR ++ + V K+ L + L E S++ W+ R V+ + L K+Y + + + I +P L+S +G I +Q+GD++ A+K F VE++ + DGL ++ +V N A ++L ++ A R + E + D + VA NN A+CL+YL Sbjct: 384 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLLTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHK-VKTVCSKILANLEQGLAEDGGMSSVTQEGRQASIRLWRSRLGRVMYSMANCLLLMKDYVLAVEAYHSVIKYYPEQEPQLLSGIGRISLQIGDIKTAEKYFQDVEKVTQK---LDGLQGKI----MVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNAAVCLLYL 667
BLAST of FC878775 vs. ExPASy Swiss-Prot
Match: TTC15_MOUSE (Tetratricopeptide repeat protein 15 OS=Mus musculus GN=Ttc15 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.220e-25 Identity = 94/292 (32.19%), Postives = 140/292 (47.95%), Query Frame = 3 Query: 114 LQDLATRGSWRTIIDNVSR---ARSQSLLTQ--PHHHLT---YLAYNTLALM-KLRRFDEAQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWLYAVLPIKLSNRQVGLDRFYELLDFVREKLARKLAEKLEE--------------SVKSWKKREIFVLNCLIGYHLSSKEYNVCFDLMNESIGRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEMLNEGKFEDGLLSEVEFRNLVSRNKALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALCLMYL 920 L+ L + +WR +D R A Q P H T L + LAL+ KL F A+ E + + + YE YPH+YP R GSMVPFS+R L+A L L N Q LDR + + V K+ L + L E SV+ W+ R VL + L K+Y + D I +P L+S +G I +Q+GD++ A+K F VE++ + DGL ++ +V N+A +YL ++ A + + E + D + VA NN A+CL+YL Sbjct: 446 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKNGLPTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHR-VKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANCLLLMKDYVLAVDAYLTVIKYYPEQEPQLLSGIGRILLQIGDIKTAEKYFQDVEKVTQK---LDGLQGKI----MVLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVANNNAAVCLLYL 729 The following BLAST results are available for this feature:
BLAST of FC878775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878775 ID=FC878775; Name=FC878775; organism=Citrus clementina; type=EST; length=927bpback to top |