FC878805

Overview
NameFC878805
Unique NameFC878805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length766
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5044 contig Ccv1_Contig5044:103..868. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: SAND_TAKRU (Protein SAND OS=Takifugu rubripes GN=sand PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18
Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 3
Query:  447 PGKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQLELHYGQ 764
            P  R  +ED +S +WR  +KH F+LS +GKPIY+RYG E  L+     + A++SFVE+ K+ IR + A   +V+FL K P+ LV +S T +S + L  +L+  Y Q
Sbjct:  102 PQSRSKEEDMSSEAWRSHRKHVFVLSEAGKPIYTRYGSEEALSSTMGVMMALVSFVESDKNTIRSIHADGCKVIFLAKSPLVLVGVSQTYQSDKELLRELQYIYYQ 207          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1A_MACFA (Vacuolar fusion protein MON1 homolog A OS=Macaca fascicularis GN=MON1A PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.016e-17
Identity = 42/105 (40.00%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  450 GKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQLELHYGQ 764
            G    DE+DA+ +WR  +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ IR + A  ++VVF+ + P+ LV ++ T +S + L  +L   Y Q
Sbjct:  138 GTAEGDEEDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQ 242          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1A_HUMAN (Vacuolar fusion protein MON1 homolog A OS=Homo sapiens GN=MON1A PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.016e-17
Identity = 42/105 (40.00%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  450 GKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQLELHYGQ 764
            G    DE+DA+ +WR  +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ IR + A  ++VVF+ + P+ LV ++ T +S + L  +L   Y Q
Sbjct:  138 GTTEGDEEDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQ 242          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1B_MOUSE (Vacuolar fusion protein MON1 homolog B OS=Mus musculus GN=Mon1b PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.163e-17
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 3
Query:  471 DDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQL 746
            D +   WR ++KH F+LS +GKPIYSRYG    L+     + A++SFV++  D IR + A  H++VFL +GP+ LV +S T +S   L+G+L
Sbjct:  105 DPSDEDWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAVSRTPQSAAQLRGEL 196          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1A_BOVIN (Vacuolar fusion protein MON1 homolog A OS=Bos taurus GN=MON1A PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.163e-17
Identity = 40/100 (40.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:  465 DEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQLELHYGQ 764
            DE++A+ +WR+ +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ IR + A  ++VVF+ + P+ LV ++ T +S + L  +L   Y Q
Sbjct:  143 DEEEAAEAWRRHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQ 242          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1B_HUMAN (Vacuolar fusion protein MON1 homolog B OS=Homo sapiens GN=MON1B PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.197e-16
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 3
Query:  471 DDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQL 746
            D +   WR ++KH F+LS +GKPIYSRYG    L+     + A++SFV++  D IR + A  H++VFL +GP+ LV +S T +S   L+G+L
Sbjct:   99 DPSDEEWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQLRGEL 190          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1A_MOUSE (Vacuolar fusion protein MON1 homolog A OS=Mus musculus GN=Mon1a PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.563e-16
Identity = 41/105 (39.05%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  450 GKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQLELHYGQ 764
            G    +E+DA+ +WR  +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ IR + A  ++VVF+ + P+ LV ++ T +S + L  +L   Y Q
Sbjct:  139 GSTEGEEEDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQ 243          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1B_MACFA (Vacuolar fusion protein MON1 homolog B OS=Macaca fascicularis GN=MON1B PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.548e-16
Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 3
Query:  420 DSSPSPSWVPGKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQL 746
            ++SP+ S          D +   WR ++KH F+LS +GKPIY RYG    L+     + A++SFV++  D IR + A  H++VFL +GP+ LV +S T +S   L+G+L
Sbjct:   82 ENSPTRSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGKPIYLRYGSVEALSATMGVMTALVSFVQSAGDTIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQLRGEL 190          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1_COCIM (Vacuolar fusion protein MON1 OS=Coccidioides immitis GN=MON1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.939e-16
Identity = 50/141 (35.46%), Postives = 81/141 (57.45%), Query Frame = 3
Query:  342 SRIGDEDDDGIQEVINDHDGFVDGVGDSSPSPSWVPGKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQLELHYGQ 764
            S  G EDDD   +  ++ D   D   D +       G + ++E      WR+++KH+FILS +GKPIY+R+GD+  ++ + A +Q IISF +   + ++   AG+ ++V L +GP++LV IS   ES   L+ QL+  Y Q
Sbjct:  183 SEPGLEDDDLSLDFESEFDCVEDIAADDN-------GDKILEE------WRQKRKHYFILSAAGKPIYTRHGDDGLISPYIAIIQTIISFHQESSNPLKSFSAGRTKIVILSQGPLHLVAISRLLESDSQLRNQLDALYMQ 310          
BLAST of FC878805 vs. ExPASy Swiss-Prot
Match: MON1_ASPOR (Vacuolar fusion protein mon1 OS=Aspergillus oryzae GN=mon1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15
Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 3
Query:  468 EDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIRLVRAGKHQVVFLIKGPIYLVCISCTEESYESLKGQLELHYGQ 764
            E++   +W+ ++KH+ ILS +GKPI++R+GD   ++ +   +Q IISF E+ +DR+    AG  + V + KGP+YLV IS   ES   LK QLE  Y Q
Sbjct:  199 ENEVLENWKSKRKHYLILSAAGKPIWTRHGDGGLISTYIGVIQTIISFYEDSQDRLNSFTAGDTKFVIVAKGPLYLVAISRILESETQLKLQLEALYMQ 297          
The following BLAST results are available for this feature:
BLAST of FC878805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SAND_TAKRU8.288e-1842.45Protein SAND OS=Takifugu rubripes GN=sand PE=3 SV=... [more]
MON1A_MACFA7.016e-1740.00Vacuolar fusion protein MON1 homolog A OS=Macaca f... [more]
MON1A_HUMAN7.016e-1740.00Vacuolar fusion protein MON1 homolog A OS=Homo sap... [more]
MON1B_MOUSE9.163e-1743.48Vacuolar fusion protein MON1 homolog B OS=Mus musc... [more]
MON1A_BOVIN9.163e-1740.00Vacuolar fusion protein MON1 homolog A OS=Bos taur... [more]
MON1B_HUMAN1.197e-1643.48Vacuolar fusion protein MON1 homolog B OS=Homo sap... [more]
MON1A_MOUSE1.563e-1639.05Vacuolar fusion protein MON1 homolog A OS=Mus musc... [more]
MON1B_MACFA4.548e-1638.53Vacuolar fusion protein MON1 homolog B OS=Macaca f... [more]
MON1_COCIM5.939e-1635.46Vacuolar fusion protein MON1 OS=Coccidioides immit... [more]
MON1_ASPOR1.323e-1542.42Vacuolar fusion protein mon1 OS=Aspergillus oryzae... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ7YB03RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ7YB03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878805 ID=FC878805; Name=FC878805; organism=Citrus clementina; type=EST; length=766bp
AAAAAGAAACCCACGCTTCTCTTTCAAAGTACCCAAAAAAAAAACCCTAA
ATTGAACCCAATTCCCATCCAATGTCCACCAGCTCTTCATCGCCATCCTC
CGATGAAGAACTCATTTTTAACCCTAACCCTATCCCTAAGCCGATTGATG
ACGAATTGACGCTGGCGTCGTTAACATTGACCGAGTCTAACGGTAATGGA
TCGGTGGGCGAAAGCGATCGTTACGGTGGTGCTGGGGTGGTGTTGGAGGC
GGAGCGGGAAGGGGAAAGGGAGGGGCCATCGAGTCCGAGTAGTATTGGGT
ATGCTGGAGAGAGAGGGAGCAGTACCGAGGGGACGAGTAACTCGAGAATT
GGTGATGAGGACGATGATGGGATACAGGAAGTGATAAATGATCATGATGG
TTTTGTTGATGGAGTTGGGGATTCTTCACCCTCGCCCTCGTGGGTCCCCG
GCAAACGCCACGTCGATGAGGACGATGCTTCCATATCATGGAGAAAGAGA
AAGAAACACTTCTTTATTTTGAGTCATTCTGGAAAACCGATATATTCCAG
ATATGGAGATGAACATAAACTTGCAGGATTTTCTGCAACATTGCAAGCAA
TTATCTCCTTTGTAGAGAATGGGAAAGATCGTATCAGATTGGTTAGGGCA
GGAAAACATCAGGTAGTATTTCTCATCAAGGGACCAATCTACTTAGTTTG
CATCAGCTGCACAGAAGAGTCTTATGAATCATTGAAGGGACAATTGGAGC
TTCACTATGGCCAGAT
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