FC878812

Overview
NameFC878812
Unique NameFC878812
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 5.535e-106
Identity = 180/282 (63.83%), Postives = 227/282 (80.50%), Query Frame = 3
Query:    3 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKG-CELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLY 845
            M DA++LL++MRR+G +PNAN YTVLIQALC++++MEEA + FVEMER  CEADVVTYT L+SGFCK  KID+CY +LD MI++G++P++LTY+HIM+AH                R+I   PD+  YNVVIRLACKLGE+KEAV +WNEME   LSPG D+FV+M++G   QGCL+EA ++FKEMV RGL S  QYGTLK LLN++L+ +K+EMAKDVWSCI +KG CELNV +WTIWIH+LFS G+ KEACSYC++M++ D MPQPDTFAKLM+GLKKLY
Sbjct:  303 MADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLY 584          

HSP 2 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 65/257 (25.29%), Postives = 115/257 (44.75%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMM 779
            DA +L ++MR +    N   +T L+   CR+ KM EA    V+M  +G E D+V YT L+SG+  + K+   Y++L  M +RG  PN   Y  ++ A                  +  C  DV  Y  ++   CK G++ +   V ++M    L P   +++ ++     +    E  E  ++M  R +   P  G    ++    +  +V+ A  +W+ +   G    V  + I I+ L S G + EA  +  +M+
Sbjct:  236 DAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM--RQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 3.588e-105
Identity = 182/284 (64.08%), Postives = 223/284 (78.52%), Query Frame = 3
Query:    3 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEK-MEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCI--VTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLY 845
            M DA++L+ +MR++G +PN N YTVLIQALCR EK M+EA R FVEMER GCEAD+VTYT LISGFCK   ID+ Y +LD M ++G++P+Q+TY+ IM+AH                ++ GC PD+  YNVVIRLACKLGE+KEAV +WNEMEA  LSPG D+FV+M++GF  QG LIEAC +FKEMV RG+ SAPQYGTLK LLN+L+R  K+EMAKDVWSCI   T  CELNV AWTIWIH+L++ GHVKEACSYCLDMM+ D+MPQP+T+AKLM+GL KLY
Sbjct:  287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLY 570          

HSP 2 Score: 93.9745 bits (232), Expect = 1.144e-18
Identity = 67/278 (24.10%), Postives = 125/278 (44.96%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLA-HXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVM--PQPDTFAKLMRGL 833
            +A ++ ++MR K   PN   +T L+   CR  K+ EA    V+M+ +G E D+V +T L+SG+  + K+   Y++++ M +RG  PN   Y  ++ A                   + GC  D+  Y  +I   CK G + +  +V ++M    + P   +++ ++     +    E  E  ++M  RG    P       ++    +  +V+ A  +W+ +   G    V  + I I+   S G + EAC++  +M+   +   PQ  T   L+  L
Sbjct:  220 EASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG--CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNL 494          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 79/279 (28.32%), Postives = 132/279 (47.31%), Query Frame = 3
Query:    3 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            +  A E+L  M ++ C P+  +YT+LI+A CR   +  A +   EM   GC  DVVTY  L++G CK  ++D   + L+ M   G  PN +T+  I+ +                  + G  P V  +N++I   C+ G L  A+++  +M      P + S+  ++HGF  +  +  A EY + MV RG    P   T   +L +L +  KVE A ++ + + +KGC   +  +   I  L   G   +A     +M   D+ P   T++ L+ GL +
Sbjct:  220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY--PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496          

HSP 2 Score: 129.028 bits (323), Expect = 3.209e-29
Identity = 77/262 (29.39%), Postives = 130/262 (49.62%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVM 794
            DA +LL +M RKG  P+  ++ +LI  LCR   +  A     +M + GC+ + ++Y  L+ GFCK +K+DR  E L+ M+ RG  P+ +TY  ++ A                    GC P +  YN VI    K G+  +A+ + +EM A  L P T ++  +V G   +G + EA ++F E    G+   P   T   ++  L ++++ + A D    ++ +GC+ N  ++TI I  L   G  KEA     ++ +  +M
Sbjct:  327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI--RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586          

HSP 3 Score: 108.997 bits (271), Expect = 3.437e-23
Identity = 77/311 (24.76%), Postives = 128/311 (41.16%), Query Frame = 3
Query:    3 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCK--------------------------------SRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            + + F+ L+ M   G  P+    T LI+  CR+ K  +A +    +E SG   DV+TY  +ISG+CK                                S K+ +  E+LD M+QR   P+ +TY  ++ A                 R  GC PDV  YNV++   CK G L EA+   N+M ++   P   +  +++      G  ++A +   +M+ +G   +P   T   L+N L R   +  A D+   +   GC+ N  ++   +H       +  A  Y   M+     P   T+  ++  L K
Sbjct:  118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF--SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426          

HSP 4 Score: 82.8037 bits (203), Expect = 2.638e-15
Identity = 61/251 (24.30%), Postives = 110/251 (43.82%), Query Frame = 3
Query:   81 IQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 833
            ++ + R  ++EE  +    M   G   D++  TTLI GFC+  K  +  +IL+ +   G +P+ +TY ++M++                   +   PDV  YN ++R  C  G+LK+A+ V + M      P   ++ +++        +  A +   EM  RG    P   T   L+N + +  +++ A    + + + GC+ NV    I + S+ S G   +A     DM+     P   TF  L+  L
Sbjct:  109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY-NVMISGYCKAGEINNALSVLDRMSVS--PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG--CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05665, mitochondrial OS=Arabidopsis thaliana GN=At1g05665 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27
Identity = 77/273 (28.21%), Postives = 128/273 (46.89%), Query Frame = 3
Query:   12 AFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRG 830
            A +   EM  +   P+  +YT +I   C++  M EA + F EM   G E D VT+T LI+G+CK+  +   + + + MIQ G  PN +TY  ++                    KIG  P++  YN ++   CK G ++EAV +  E EAA L+  T ++  ++  +   G + +A E  KEM+G+GL   P   T   L+N       +E  + + + ++ KG   N   +   +       ++K A +   DM    V P   T+  L++G
Sbjct:  370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL--QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640          

HSP 2 Score: 118.242 bits (295), Expect = 5.665e-26
Identity = 71/276 (25.72%), Postives = 135/276 (48.91%), Query Frame = 3
Query:   12 AFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            A  + +E    G   N  SY ++I  +C++ +++EA+   + ME  G   DV++Y+T+++G+C+  ++D+ +++++ M ++G+ PN   Y  I+                    + G +PD   Y  +I   CK G+++ A   + EM +  ++P   ++  ++ GF   G ++EA + F EM  +GL   P   T  EL+N   +A  ++ A  V + ++  GC  NV  +T  I  L   G +  A     +M    + P   T+  ++ GL K
Sbjct:  230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL--EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503          

HSP 3 Score: 117.857 bits (294), Expect = 7.399e-26
Identity = 82/272 (30.15%), Postives = 119/272 (43.75%), Query Frame = 3
Query:   15 FELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRG 830
            ++L++ M+RKG  PN+  Y  +I  LCR+ K+ EA  AF EM R G   D V YTTLI GFCK   I    +    M  R I P+ LTY  I+                      G  PD   +  +I   CK G +K+A  V N M  A  SP   ++  ++ G   +G L  A E   EM   GL   P   T   ++N L ++  +E A  +       G   +   +T  + +   +G + +A     +M+   + P   TF  LM G
Sbjct:  301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570          

HSP 4 Score: 102.834 bits (255), Expect = 2.463e-21
Identity = 63/227 (27.75%), Postives = 109/227 (48.02%), Query Frame = 3
Query:    3 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKG 683
            +  A ELL EM + G  PN  +Y  ++  LC+   +EEA +   E E +G  AD VTYTTL+  +CKS ++D+  EIL  M+ +G+ P  +T+  +M                      G  P+ + +N +++  C    LK A  ++ +M +  + P   ++  +V G      + EA   F+EM G+G   +    T   L+   L+ +K   A++V+  +  +G
Sbjct:  472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF--SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696          

HSP 5 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 60/272 (22.06%), Postives = 122/272 (44.85%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLM 824
            +A  LL  M  KG  P+  SY+ ++   CR  ++++  +    M+R G + +   Y ++I   C+  K+    E    MI++GILP+ + Y  ++                         PDV  Y  +I   C++G++ EA  +++EM    L P + +F  +++G+   G + +A      M+  G   +P   T   L++ L +   ++ A ++   +   G + N++ +   ++ L  +G+++EA     +   A +     T+  LM
Sbjct:  264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PP412_ARATH (Pentatricopeptide repeat-containing protein At5g41170, mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.923e-27
Identity = 79/256 (30.86%), Postives = 127/256 (49.61%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEM---EAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGR----GLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEA 755
            DA EL  EM R    PN  +YT LI   C    ++EA + F  ME  GC  DVV YT+LI+GFCK +K+D   +I   M Q+G+  N +TY  ++                      G  P++  YNV++   C  G++K+A+ ++ +M   E   ++P   ++ V++HG    G L +A   F++M  R    G++      T   ++  + +A KV+ A +++  + +KG + NV  +T  I  LF  G   EA
Sbjct:  265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII------TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514          

HSP 2 Score: 106.686 bits (265), Expect = 1.706e-22
Identity = 82/314 (26.11%), Postives = 137/314 (43.63%), Query Frame = 3
Query:   12 AFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIM--LAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVE-----------------------------------MAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDAD---VMPQPDTFAKLMRGL 833
            A   L +M + G +P+  ++T LI   C   +MEEA     +M   G + DVV YTT+I   CK+  ++    + D M   GI P+ + Y  ++  L +                RKI   PDV  +N +I    K G+  +A  ++NEM   S++P   ++  +++GF  +GC+ EA + F  M  +G    P       L+N   + +KV+                                   +A++V+S +V++G   N+  + + +H L  NG VK+A     DM   +   V P   T+  L+ GL
Sbjct:  126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI--KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF--PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435          

HSP 3 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 61/270 (22.59%), Postives = 120/270 (44.44%), Query Frame = 3
Query:   21 LLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRG 830
            L   ++  G   +  +  +L+   C+  +   A+    +M + G E D+VT+T+LI+GFC   +++    +++ M++ GI P+ + Y  I+ +                    G  PDV  Y  ++   C  G  ++A ++   M    + P   +F  ++  F+ +G  ++A E + EM+   +  AP   T   L+N       V+ A+ ++  + TKGC  +V A+T  I+       V +A     +M    +     T+  L++G
Sbjct:   94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI--APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361          

HSP 4 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 58/227 (25.55%), Postives = 97/227 (42.73%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTY---LHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNV-----------------------------------VIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL 575
            +A ++   M  KGC P+  +YT LI   C+ +K+++A + F EM + G   + +TYTTLI GF +  K +   E+   M+ RG+ PN  TY   LH +  +                   G  P++  YNV                                   +I+  CK G++K AVN++  + +  + P   ++  M+ G   +G   EA   F++M   G+
Sbjct:  300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.124e-27
Identity = 83/312 (26.60%), Postives = 137/312 (43.91%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEAD-----------------------------------VVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            D F+LL+ M  KG +PN  SY V+I  LCR  +M+E +    EM R G   D                                   V+TYT+LI   CK+  ++R  E LD M  RG+ PN+ TY  ++                      G  P V  YN +I   C  G++++A+ V  +M+   LSP   S+  ++ GF     + EA    +EMV +G+   P   T   L+      ++ + A D++  ++  G   + + +T  I++    G +++A     +M++  V+P   T++ L+ GL K
Sbjct:  258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI--KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567          

HSP 2 Score: 107.071 bits (266), Expect = 1.306e-22
Identity = 70/292 (23.97%), Postives = 133/292 (45.55%), Query Frame = 3
Query:    3 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACE-----YFKEMVGRGL--------LSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            M +A+ +L+EM   G  P+  +Y  LI   C   KME+A     +M+  G   DVV+Y+T++SGFC+S  +D    +   M+++GI P+ +TY  ++                    ++G  PD   Y  +I   C  G+L++A+ + NEM    + P   ++ V+++G   Q    EA       +++E V   +         S  ++ ++  L+        +  A  V+  ++ K  + +  A+ I IH     G +++A +   +M+ +  +    T   L++ L K
Sbjct:  396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687          

HSP 3 Score: 106.686 bits (265), Expect = 1.706e-22
Identity = 78/308 (25.32%), Postives = 127/308 (41.23%), Query Frame = 3
Query:   12 AFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPN-----------------------------------QLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRG 830
            A  + KEM      PN  +Y +LI+  C    ++ A   F +ME  GC  +VVTY TLI G+CK RKID  +++L SM  +G+ PN                                   ++TY  ++  +                 + G  P V  Y  +I   CK G +  A+   ++M    L P   ++  +V GF  +G + EA    +EM   G   +P   T   L+N      K+E A  V   +  KG   +V +++  +     +  V EA     +M++  + P   T++ L++G
Sbjct:  189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF--SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494          

HSP 4 Score: 100.908 bits (250), Expect = 9.360e-21
Identity = 61/217 (28.11%), Postives = 103/217 (47.47%), Query Frame = 3
Query:    3 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAK 653
            M  A E L +MR +G  PN  +YT L+    +   M EA R   EM  +G    VVTY  LI+G C + K++    +L+ M ++G+ P+ ++Y  ++                    + G  PD   Y+ +I+  C+    KEA +++ EM    L P   ++  +++ +  +G L +A +   EMV +G+L  P   T   L+N L +  +   AK
Sbjct:  361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL--PDVVTYSVLINGLNKQSRTREAK 575          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.141e-26
Identity = 77/304 (25.33%), Postives = 135/304 (44.41%), Query Frame = 3
Query:   15 FELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLIS------------------------------GFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEM-EAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 833
            + + ++M+R G +PN  +Y VL++ALC+  K++ A +  VEM   GC  D V+YTT+IS                              G CK       +E++  M+++GI PN ++Y  ++                    K GC P++   + +++     G   +A+++WN+M     L P   ++  +V GF   G +++A   F  M   G   +P   T   L+N   +   ++ A  +W+ ++T GC  NV  +T  + +L  +   KEA S    M   +  P   TF   ++GL
Sbjct:  166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC--SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467          

HSP 2 Score: 95.9005 bits (237), Expect = 3.011e-19
Identity = 66/277 (23.83%), Postives = 118/277 (42.60%), Query Frame = 3
Query:   12 AFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTK-GCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            A E+   ++  GCDP+   Y  ++  L    +++     + +M+R G E +V TY  L+   CK+ K+D   ++L  M  +G  P+ ++Y  ++ +                       P VS YN +I   CK  + K A  +  EM    +SP   S+  +++     G +  A  +  +M+ RG    P   TL  L+           A D+W+ ++   G + NV A+   +    S+G++ +A S    M +    P   T+  L+ G  K
Sbjct:  130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG--CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399          

HSP 3 Score: 80.1073 bits (196), Expect = 1.710e-14
Identity = 57/201 (28.36%), Postives = 87/201 (43.28%), Query Frame = 3
Query:    9 DAFELLKEMRRK-GCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAA-SLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL-LSAPQYGTL 602
            DA +L  +M R  G  PN  +Y  L+Q  C    + +A   F  ME  GC  ++ TY +LI+GF K   +D    I + M+  G  PN + Y +++ A                  K  C P V  +N  I+  C  G L  A  V+ +ME      P   ++  ++ G      + EA    +E+  RG+  S+  Y TL
Sbjct:  334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.947e-26
Identity = 77/275 (28.00%), Postives = 131/275 (47.64%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 833
            +A+ +L EM   G  PN   +  LI A C+  ++ EA   F EM R GC+ DV T+ +LISG C+  +I     +L  MI  G++ N +TY  ++ A                    G   D   YN +I+  C+ GE+ +A +++ +M     +P   S  ++++G    G + EA E+ KEMV RG  S P   T   L+N L RA ++E    ++  +  +G   +   +   +  L   G V +AC    + ++   +P   T++ L++ +
Sbjct:  442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG--STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714          

HSP 2 Score: 114.005 bits (284), Expect = 1.068e-24
Identity = 77/309 (24.92%), Postives = 135/309 (43.69%), Query Frame = 3
Query:    3 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEIL--------------------------------DSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 833
            + +A +LL+EM   GC P+A ++  +I  LC+ +++ EA +    M   G   D +TY  L++G CK  ++D   ++                                 D +   GI+P+  TY  ++  +                R  GC P+V +Y +++   CKLG++ EA NV NEM A  L P T  F  ++  F  +  + EA E F+EM  +G    P   T   L++ L    +++ A  +   ++++G   N   +   I++    G +KEA     +M+         T+  L++GL
Sbjct:  268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG--CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574          

HSP 3 Score: 82.4185 bits (202), Expect = 3.445e-15
Identity = 64/267 (23.97%), Postives = 120/267 (44.94%), Query Frame = 3
Query:   12 AFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMV-GRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDT 809
            A  +  +M  +   P   ++ V+++A C + +++ A     +M + GC  + V Y TLI    K  +++   ++L+ M   G +P+  T+  ++L                     G  PD   Y  ++   CK+G +  A +++  +      P    F  ++HGF+  G L +A     +MV   G++  P   T   L+    +   V +A +V   +  KGC+ NVY++TI +      G + EA +  L+ M AD + +P+T
Sbjct:  201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV--PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN-VLNEMSADGL-KPNT 459          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.947e-26
Identity = 81/300 (27.00%), Postives = 136/300 (45.33%), Query Frame = 3
Query:    6 TDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMV-GRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGH---------------------VKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            TDA  LL  M  +G   N + Y+VLI  L +  K EEA   + +M   GC+ ++V Y+ L+ G C+  K +   EIL+ MI  G LPN  TY  +M                    K GC  +   Y+V+I   C +G +KEA+ VW++M    + P T ++  ++ G  G G +  A + + EM+      S P   T   LL+ L   + +  A D+ + ++ +GC+ +V     ++++L    +                     V  AC+    M+   + P+  T+A ++R + K
Sbjct:  344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643          

HSP 2 Score: 117.857 bits (294), Expect = 7.399e-26
Identity = 75/275 (27.27%), Postives = 120/275 (43.64%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 833
            +A  LL EM+ +GC P+   Y VLI  LC+   +    +    M   GC  + VTY TLI G C   K+D+   +L+ M+    +PN +TY  ++                    + G   +   Y+V+I    K G+ +EA+++W +M      P    + V+V G   +G   EA E    M+  G L  P   T   L+    +    E A  VW  +   GC  N + +++ I  L   G VKEA      M+   + P    ++ +++GL
Sbjct:  240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL--PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512          

HSP 3 Score: 108.997 bits (271), Expect = 3.437e-23
Identity = 70/263 (26.62%), Postives = 118/263 (44.87%), Query Frame = 3
Query:   54 PNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL-LSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            PN  S+ ++I+ALC++  ++ A   F  M    C  D  TY TL+ G CK  +ID    +LD M   G  P+ + Y  ++                      GCVP+   YN +I   C  G+L +AV++   M ++   P   ++  +++G + Q    +A      M  RG  L+   Y     L++ L +  K E A  +W  +  KGC+ N+  +++ +  L   G   EA      M+ +  +P   T++ LM+G  K
Sbjct:  185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV---LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444          
BLAST of FC878812 vs. ExPASy Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.543e-26
Identity = 77/275 (28.00%), Postives = 129/275 (46.91%), Query Frame = 3
Query:    9 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 833
            +A +L  +M+   C P   +YTVLI++LC  E+  EA     EME +G + ++ TYT LI   C   K ++  E+L  M+++G++PN +TY  ++  +                      P+   YN +I+  CK   + +A+ V N+M    + P   ++  ++ G    G    A      M  RGL+  P   T   +++SL ++++VE A D++  +  KG   NV  +T  I      G V EA      M+  + +P   TF  L+ GL
Sbjct:  306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV--PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577          

HSP 2 Score: 110.153 bits (274), Expect = 1.543e-23
Identity = 77/279 (27.60%), Postives = 127/279 (45.52%), Query Frame = 3
Query:    6 TDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAH-XXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            ++A  L+KEM   G  PN ++YTVLI +LC   K E+A     +M   G   +V+TY  LI+G+CK   I+   ++++ M  R + PN  TY  ++  +                 RK+  +PDV  YN +I   C+ G    A  + + M    L P   ++  M+        + EAC+ F  +  +G+   P       L++   +A KV+ A  +   +++K C  N   +   IH L ++G +KEA      M+   + P   T   L+  L K
Sbjct:  340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKV--LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV--NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614          

HSP 3 Score: 103.605 bits (257), Expect = 1.444e-21
Identity = 64/271 (23.62%), Postives = 121/271 (44.65%), Query Frame = 3
Query:   18 ELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRG 830
            ++  EM      PN  +Y  ++   C++  +EEAN+   ++  +G + D  TYT+LI G+C+ + +D  +++ + M  +G   N++ Y H++                   +   C P V  Y V+I+  C      EA+N+  EME   + P   ++ V++     Q    +A E   +M+ +GL+  P   T   L+N   +   +E A DV   + ++    N   +   I   +   +V +A      M++  V+P   T+  L+ G
Sbjct:  204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM--PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471          

HSP 4 Score: 102.064 bits (253), Expect = 4.201e-21
Identity = 74/293 (25.26%), Postives = 130/293 (44.37%), Query Frame = 3
Query:   12 AFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLF------SNGHVKEACSYCLDMMDAD-------------VMPQPDTFAKLMRGL 833
            A+ LL  M  +G  P+  +YT +I +LC+ +++EEA   F  +E+ G   +VV YT LI G+CK+ K+D  + +L+ M+ +  LPN LT+  ++                    KIG  P VS   ++I    K G+   A + + +M ++   P   ++   +  +  +G L++A +   +M   G+  +P   T   L+       +   A DV   +   GCE + + +   I  L         G   E C+   +MM+ D             V P   ++ KL+ G+
Sbjct:  481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV--SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS-NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770          

HSP 5 Score: 81.2629 bits (199), Expect = 7.674e-15
Identity = 54/257 (21.01%), Postives = 111/257 (43.19%), Query Frame = 3
Query:   69 YTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHXXXXXXXXXXXXXXXXRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKELLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 839
            Y  L+ +L R   ++E  + ++EM       ++ TY  +++G+CK   ++   + +  +++ G+ P+  TY  +++ +                   GC  +   Y  +I   C    + EA++++ +M+     P   ++ V++    G     EA    KEM   G+   P   T   L++SL    K E A+++   ++ KG   NV  +   I+     G +++A      M    + P   T+ +L++G  K
Sbjct:  186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI--KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440          
The following BLAST results are available for this feature:
BLAST of FC878812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
PP447_ARATH5.535e-10663.83Putative pentatricopeptide repeat-containing prote... [more]
PP275_ARATH3.588e-10564.08Pentatricopeptide repeat-containing protein At3g49... [more]
PPR28_ARATH3.791e-3028.32Pentatricopeptide repeat-containing protein At1g09... [more]
PPR12_ARATH1.032e-2728.21Pentatricopeptide repeat-containing protein At1g05... [more]
PP412_ARATH3.923e-2730.86Pentatricopeptide repeat-containing protein At5g41... [more]
PP407_ARATH5.124e-2726.60Pentatricopeptide repeat-containing protein At5g39... [more]
PP270_ARATH1.141e-2625.33Pentatricopeptide repeat-containing protein At3g48... [more]
PP444_ARATH1.947e-2628.00Pentatricopeptide repeat-containing protein At5g64... [more]
PP327_ARATH1.947e-2627.00Pentatricopeptide repeat-containing protein At4g20... [more]
PP445_ARATH2.543e-2628.00Pentatricopeptide repeat-containing protein At5g65... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA29CF08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA29CF08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878812 ID=FC878812; Name=FC878812; organism=Citrus clementina; type=EST; length=847bp
AAATGACTGACGCTTTTGAGTTGTTGAAGGAGATGAGAAGAAAAGGTTGT
GACCCTAATGCAAATTCCTATACTGTTTTGATTCAAGCGCTTTGTAGGAT
GGAAAAAATGGAGGAGGCAAACAGGGCTTTTGTTGAGATGGAAAGGAGTG
GATGTGAGGCTGACGTTGTGACCTACACTACTTTGATAAGTGGATTTTGC
AAGTCGAGAAAGATTGATAGATGCTATGAGATTTTGGACAGTATGATACA
GAGAGGGATTTTGCCAAATCAATTGACTTATTTGCATATAATGTTGGCTC
ATGAGAAGAAGGAAGAGTTAGAAGAGTGTGTGGAACTGATGGGGGAGATG
AGGAAGATCGGTTGTGTTCCTGATGTTAGTAATTATAACGTAGTGATCAG
ATTGGCTTGTAAGTTAGGGGAGTTGAAAGAAGCTGTTAATGTTTGGAATG
AGATGGAAGCGGCCAGTCTTAGTCCAGGGACTGATAGTTTCGTTGTTATG
GTTCATGGGTTTCTTGGTCAAGGTTGTCTTATTGAGGCTTGTGAGTATTT
TAAAGAAATGGTCGGGAGAGGTCTTTTATCTGCTCCTCAGTATGGTACCT
TGAAGGAGTTGTTGAATTCTCTATTGAGAGCTCAAAAGGTTGAAATGGCT
AAAGATGTGTGGAGCTGTATTGTTACTAAAGGATGTGAACTTAATGTGTA
TGCATGGACAATTTGGATTCATTCTTTGTTCTCCAATGGACATGTTAAAG
AAGCCTGTTCTTATTGTCTGGACATGATGGATGCAGATGTAATGCCCCAG
CCAGATACTTTTGCTAAGCTCATGCGTGGTCTGAAGAAACTGTATAA
back to top